Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g01524 ATGTCTTCTACGTTCAGCGGCGATGAGACGGCACCTTTTTTTGGCTTCCTTGGAGCGGCCGCTGCGCTCATCTTCTCCTGTATGGGGGCTGCTTATGGAACGGCGAAAAGCGGTGTAGGGGTAGCATCGATGGGAGTGATGAGGCCTGAACTGGTGATGAAATCGATTGTGCCCGTTGTTATGGCCGGAGTTTTGGGTATTTACGGTCTGATTATTGCTGTAATTATTAGCACTGGGATCAACCCCAAGGCCAAATCCTATTACCTTTTTGATGGCTACGCCCATTTGTCCTCTGGTCTTGCTTGTGGCCTCGCTGGTCTCTCTGCTGGCATGGCTATTGGAATCGTCGGTGATGCCGGTGTTAGAGCGAATGCACAGCAGCCAAAGCTCTTTGTTGGGATGATTCTCATTCTTATCTTTGCTGAAGCACTTGCCCTGTATGGTCTCATTGTTGGCATCATTCTTTCTTCGCGAGCAGGTCAGTCCAGAGCCGAATAA 498 50.4 MSSTFSGDETAPFFGFLGAAAALIFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 165
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 51150846 51152181 - Bda003785.1 Bda01g01524 1524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g01524 165 Gene3D - 11 162 IPR035921 -
Bda01g01524 165 PANTHER V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT 3 165 - -
Bda01g01524 165 Pfam ATP synthase subunit C 97 155 IPR002379 GO:0015078|GO:0033177|GO:1902600
Bda01g01524 165 Pfam ATP synthase subunit C 17 76 IPR002379 GO:0015078|GO:0033177|GO:1902600
Bda01g01524 165 SUPERFAMILY F1F0 ATP synthase subunit C 14 77 IPR035921 -
Bda01g01524 165 SUPERFAMILY F1F0 ATP synthase subunit C 87 156 IPR035921 -
Bda01g01524 165 PRINTS Vacuolar ATP synthase 16kDa subunit signature 134 157 IPR000245 GO:0033179|GO:0046961|GO:1902600
Bda01g01524 165 PRINTS Vacuolar ATP synthase 16kDa subunit signature 107 133 IPR000245 GO:0033179|GO:0046961|GO:1902600
Bda01g01524 165 PRINTS Vacuolar ATP synthase 16kDa subunit signature 56 80 IPR000245 GO:0033179|GO:0046961|GO:1902600
Bda01g01524 165 PRINTS Vacuolar ATP synthase 16kDa subunit signature 30 54 IPR000245 GO:0033179|GO:0046961|GO:1902600
Bda01g01524 165 CDD ATP-synt_Vo_c_ATP6C_rpt2 89 156 - -
Bda01g01524 165 PANTHER V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT 3 165 - -
Bda01g01524 165 TIGRFAM V_ATP_synt_C: V-type ATPase, C subunit 13 121 IPR011555 GO:0033179|GO:0046961|GO:1902600
Bda01g01524 165 CDD ATP-synt_Vo_c_ATP6C_rpt1 13 80 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g01524 Bda08g01232 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01524 Bda-Chr1:51150846 Bda06g00898 Bda-Chr6:17380457 4.65E-113 dispersed
Bda01g01524 Bda-Chr1:51150846 Bda08g01232 Bda-Chr8:50482970 3.62E-113 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g01524 K02155 - cit:102607521 288.115