Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda01g01560 | ATGGCTGGATCCGACGAGAACAACCCGGGAGATATGGGACCCGCAGATCAGCAAGGTGGACGTGCAGGAGGCGTCAAATTCGTGTTTGGGGCAGGCCAAAACCGTAGAGCGTTGAGCATTATTAACCGGAATATTGCCGGAGCTCCCCCTTACCCATGTGCAGTCCACAAAAGAGGCTTGACAGAAAAACATGCTGTCTGCAATAAGTTCCCAAGCGTTCTGGTGCATCGACCAATCACTAGGAAGTTTGCTGCCCAGATGGTCAATAAGCAGCAACAAACAGAACCAGAGGAGATTCAGAAACCTGTCAAGTTGGTCGAAAAGGAATCAGAAGATTGCTCCATCATAGACCTGGAAGACGACAATGAAACGGAGGAACTCCCAATTGCCAAGTTTTCCCAACACACAGAAGCAATGTTGGAGGAAGTTGATGCCATGGAGGAAGTGGAAATGGAAGATATCGCTGAAGAGTCAGTTGTGGACATAGACAGCCTTGATAAAAACAATCATCTTGCAGTTGTTGAGTACATTGATGATTTGTATGCCTACTACAGAAAAGTAGAGAGTTCTAGCTGCGTCCCACCAAACTACATGGCTCAGCAGGCAGAGATTAACCAGAGAATGAGAGGTATTCTAGTCGATTGGCTAATCGAGGTGCATTACAAGTTTGAGTTGATGGAGGAGACTCTATACCTCACAGTCAACCTGATTGATAGATTCTTAGCAGTTCAGTCAGTGGTCAGGAAGAAACTGCAGCTGGTCGGAGTAACAGCTATGCTTCTCGCATGCAAATATGAAGAAGTTTCGGTTCCTGTGGTGGAGGATCTCATCCTGATTTCTGATAAAGCTTACAGTAGAAAAGAAGTGCTTGAGATGGAAAAAATGATGGTAAATTCTTTGCAGTTCAATCTCTCAGTTCCCACGTCTTATGTATTCATGAGGAGATTTCTCAAAGCTGCTCAATCCGACAAAAAGCTTGAACTACTGTCGTTCTTCATGATCGAACTCTGTCTGATAGAGTACGAAATGCTAAAGTTTCAGCCGTCTTTGTTAGCTGCATCTGCAATTTTCACAGCCCAGTGTTGTCTTAGTGGGTCTAAGCAATGGAGCAGCACCAGTGTATTGCATAGTTGCTATTCAGAAGAGCAGCTTTTGGAATGCTCGCAGATGATGGTAGGTTTCCATCAGAAAGCTGGAACAGGGAAGCTGACAGGAGTTCACAGGAAGTATTCCACGTCCAAGTTTGGTTATGTCGCAAGAACAGAGCCTGCTAACTTTCTGTTGTGA | 1287 | 45.14 | MAGSDENNPGDMGPADQQGGRAGGVKFVFGAGQNRRALSIINRNIAGAPPYPCAVHKRGLTEKHAVCNKFPSVLVHRPITRKFAAQMVNKQQQTEPEEIQKPVKLVEKESEDCSIIDLEDDNETEELPIAKFSQHTEAMLEEVDAMEEVEMEDIAEESVVDIDSLDKNNHLAVVEYIDDLYAYYRKVESSSCVPPNYMAQQAEINQRMRGILVDWLIEVHYKFELMEETLYLTVNLIDRFLAVQSVVRKKLQLVGVTAMLLACKYEEVSVPVVEDLILISDKAYSRKEVLEMEKMMVNSLQFNLSVPTSYVFMRRFLKAAQSDKKLELLSFFMIELCLIEYEMLKFQPSLLAASAIFTAQCCLSGSKQWSSTSVLHSCYSEEQLLECSQMMVGFHQKAGTGKLTGVHRKYSTSKFGYVARTEPANFLL | 428 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 51495590 | 51497796 | - | Bda003829.1 | Bda01g01560 | 1560 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda01g01560 | 428 | Pfam | Cyclin, C-terminal domain | 307 | 422 | IPR004367 | - | |
Bda01g01560 | 428 | CDD | CYCLIN | 305 | 392 | IPR013763 | - | |
Bda01g01560 | 428 | PANTHER | CYCLIN-B2-3-RELATED | 24 | 425 | - | - | |
Bda01g01560 | 428 | Gene3D | - | 193 | 305 | - | - | |
Bda01g01560 | 428 | SUPERFAMILY | Cyclin-like | 168 | 304 | IPR036915 | - | |
Bda01g01560 | 428 | Gene3D | - | 179 | 419 | - | - | |
Bda01g01560 | 428 | SUPERFAMILY | Cyclin-like | 306 | 425 | IPR036915 | - | |
Bda01g01560 | 428 | CDD | CYCLIN | 208 | 297 | IPR013763 | - | |
Bda01g01560 | 428 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
Bda01g01560 | 428 | SMART | Cyclin_C_2 | 307 | 424 | IPR004367 | - | |
Bda01g01560 | 428 | Pfam | Cyclin, N-terminal domain | 179 | 305 | IPR006671 | - | |
Bda01g01560 | 428 | ProSitePatterns | Cyclins signature. | 209 | 240 | IPR006671 | - | |
Bda01g01560 | 428 | SMART | cyclin_7 | 214 | 298 | IPR013763 | - | |
Bda01g01560 | 428 | SMART | cyclin_7 | 311 | 393 | IPR013763 | - | |
Bda01g01560 | 428 | PIRSF | Cyclin_A_B_D_E | 29 | 428 | IPR039361 | - | |
Bda01g01560 | 428 | PANTHER | CYCLINS | 24 | 425 | IPR039361 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda01g01560 | Bda03g00194 | CCT | |
Bda01g00581 | Bda01g01560 | CCT | |
Bda01g01560 | Bda03g00194 | ECH | |
Bda01g00581 | Bda01g01560 | ECH | |
Bda01g01560 | Bda01g00581 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda01g01560 | Bda-Chr1:51495590 | Bda11g00971 | Bda-Chr11:9465763 | 1.44E-173 | dispersed | |
Bda14g00493 | Bda-Chr14:3583814 | Bda01g01560 | Bda-Chr1:51495590 | 2.46E-44 | dispersed | |
Bda01g01560 | Bda-Chr1:51495590 | Bda11g00693 | Bda-Chr11:6914682 | 3.79E-86 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda01g01560 | K21777 | - | tcc:18591703 | 619.772 |