Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g01585 ATGGGTGATCGTGGCGACGAGGATATGGGCTGGGATTCACTGTTTCTGCTGAATCAAAGTGAAAAGCTTGGAGCTTCCTCTTCAATGGCTTCTCGTAGTGATTTCTCTGCTTCTTACCAACTTCTGATGGAAAATGAAATCCCATTCCACCTTGGTCGATTTCCATCTGATTCAAAACATCCATGCGATAGAAATGAAGGCATCTCAGAATTAGTTGGCTCGCTCGTTCGTCCTGAGTCTGCCCAGATTAGTAATCCTGGGTGTCCTTCAATCTACGAAAGGGTCTCAAAAGAGGCAGCTGAAGGATCTTACTCTCATGGGAAGAGAAGGGTACCTTTTGTAAACCCCCTAGCTTCTGATGATAAGCGAGAAATACCTGGTGAGAAAAGACCTAAAATGGAGGACAGTGATTTGCATAACAAACCAGTGGGAAAAGGAGCCAAGGAGAACTCGGTCGGCGGTGAAGCTCCCAAGGATAATTTCATCCATGTGAGAGCAAGAAGAGGCCAAGCAACAAACAGTCATAGCCTTGCAGAGAGGGTTAGACGAGAAAAGATTAGCGAAAGAATGAGATTGCTCCAAGAGCTTGTCCCTGGATGCAGCAAGATTACTGGGAAAGCTGTAATGCTGGATGAGATTATCAATTACGTTCAGTCTCTTCAGCAGCAAGTTGAGTTTCTATCTATGAAACTTGCTACTGTCTACCCAGAACTGAATTTGGACTTCGACAGGACTCTATCAAAAGATATTCTGCATTCAAGAACCAGCAACGAAGCCATTGTTCGATTTGGTTCTGGGTTTCCCCCATCAGATCCGGTCCATTACGGCACAATTCCACCTCAAAGCATGGCTCCTCCATTTCCTCAAACCGAATCAGATGACGAGATTCGGAGCCTACTACGATTCAATCGGAGTTCAGGGTTTGAGAATTTTGGATAG 939 45.15 MGDRGDEDMGWDSLFLLNQSEKLGASSSMASRSDFSASYQLLMENEIPFHLGRFPSDSKHPCDRNEGISELVGSLVRPESAQISNPGCPSIYERVSKEAAEGSYSHGKRRVPFVNPLASDDKREIPGEKRPKMEDSDLHNKPVGKGAKENSVGGEAPKDNFIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCSKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVYPELNLDFDRTLSKDILHSRTSNEAIVRFGSGFPPSDPVHYGTIPPQSMAPPFPQTESDDEIRSLLRFNRSSGFENFG 312
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 51700642 51702173 + Bda003852.2 Bda01g01585 1585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g01585 312 Gene3D - 167 239 IPR036638 GO:0046983
Bda01g01585 312 MobiDBLite consensus disorder prediction 110 158 - -
Bda01g01585 312 MobiDBLite consensus disorder prediction 115 144 - -
Bda01g01585 312 Pfam Helix-loop-helix DNA-binding domain 173 221 IPR011598 GO:0046983
Bda01g01585 312 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 126 310 - -
Bda01g01585 312 SMART finulus 176 226 IPR011598 GO:0046983
Bda01g01585 312 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 170 220 IPR011598 GO:0046983
Bda01g01585 312 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 10 106 IPR024097 GO:0006355
Bda01g01585 312 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 10 106 - -
Bda01g01585 312 CDD bHLH_AtBPE_like 160 243 - -
Bda01g01585 312 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 168 236 IPR036638 GO:0046983
Bda01g01585 312 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 126 310 IPR024097 GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01585 Bda-Chr1:51700642 Bda11g01162 Bda-Chr11:11889411 2.72E-47 dispersed
Bda01g01585 Bda-Chr1:51700642 Bda01g02113 Bda-Chr1:57180782 3.91E-52 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
15459 PF00010 HLH 3.70E-06 No_clan Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g01585 - - pmum:103320500 265.003