Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda01g01591 | ATGGCCCACAGTAACCTTCAACTTAACCACGGTTATAATTTTCTGATCTGTTCTTACCATTTTGAGTTCATTTTAACTTCTCTTAAATCGCATTCTCTCTGGGGGGTTTTGCTTCCCACCCAAGCAATAATTTCTATAAAAAGCTTACCATTTTCAGTTTCAGAAGGGAGAGCATTGATAGATCAAGAAAGATTGGATCTTTCTGGGGAAGATCATCGTGGAGAGGCGAAGATGAGCTGCAACGGGTGCAGAGTGCTGAGAAAAGGGTGTAGCAAGACGTGCGAAATACGATCATGCCTGCGCTGGATAGACTCGCCGGACGCCCAAGCTAACGCCACCTTGTTCCTCGCTAAGTTCTTTGGTCGGACCGACCTCTTGTCCTTGATCTCCGCCGTTCCGGATCATGAAAGATCCGCTTTGTTTAAGTCGCTGTTACACGAAGCTTGTGGAAGAACAGTGAATCCAGTGAACGGAGCGACGGGGCTGTTGGCGTTCGGTAAATGGAACGTTTGCGAGGCTGCAGTGGAAACAGTTCTCTCCGGCGGCGTTCCCCTGCCAATTCAGGGACTTACAGCTGCACTTCCGACGCCGATATTTGAAGAAACTTTACTCCCACCCAATAACGGCACATGCAATGAGCTAATCGCACCTCGCCTCTTCTCTCCATCTTCGCTGTCCGCCGTTAAAGCAAGGGAATGTCAACCGTCCGATTTCGATAATCTCTCTCAAACAAAATTCGCAAGGAGTGTCACCGGAAGCTGCAGCCATGGCGATCGTAAAGATCTGAAGCTGCTGAATTTATTTGTGTGA | 810 | 48.27 | MAHSNLQLNHGYNFLICSYHFEFILTSLKSHSLWGVLLPTQAIISIKSLPFSVSEGRALIDQERLDLSGEDHRGEAKMSCNGCRVLRKGCSKTCEIRSCLRWIDSPDAQANATLFLAKFFGRTDLLSLISAVPDHERSALFKSLLHEACGRTVNPVNGATGLLAFGKWNVCEAAVETVLSGGVPLPIQGLTAALPTPIFEETLLPPNNGTCNELIAPRLFSPSSLSAVKARECQPSDFDNLSQTKFARSVTGSCSHGDRKDLKLLNLFV | 269 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 51762676 | 51763571 | + | Bda003860.1 | Bda01g01591 | 1591 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda01g01591 | 269 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 38 | 78 | 211 | - | - | |
Bda01g01591 | 269 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 39-LIKE | 78 | 211 | - | - | |
Bda01g01591 | 269 | ProSiteProfiles | LOB domain profile. | 78 | 184 | IPR004883 | - | |
Bda01g01591 | 269 | Pfam | Lateral organ boundaries (LOB) domain | 79 | 178 | IPR004883 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda01g00585 | Bda01g01591 | CCT | |
Bda01g01591 | Bda01g00585 | ECH | |
Bda01g00585 | Bda01g01591 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda01g01591 | Bda-Chr1:51762676 | Bda11g01472 | Bda-Chr11:21231420 | 2.61E-48 | dispersed | |
Bda01g00585 | Bda-Chr1:32868651 | Bda01g01591 | Bda-Chr1:51762676 | 3.63E-51 | wgd | |
Bda01g01591 | Bda-Chr1:51762676 | Bda08g01358 | Bda-Chr8:54032646 | 3.79E-92 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
15463 | PF03195 | LOB | 4.70E-21 | No_clan | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda01g01591 | - | - | zju:107420556 | 201.06 |