Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g01636 ATGAGCCAAATTGAAGTATCTATGACGAGGGCACCTCTTGTTCCTCTCGCGACTCTAATAGGTCGGGAGCTTAGGAAAGAAAAGAGTGAGAAACCTTTTGTAAAGTTTGGACAGGCAGCTTTGGCAAAGAAAGGAGAGGATTACTTTCTCATAAAACCCGATTGCCAGCGGATTCCTGGGAACCCATCTTCATCATTTTCTGTCTTTGCGATTTTCGACGGGCACAATGGAATATCAGCTGCTATCTTTGCAAAGGAGCATTTATTGGGCAATGTCTTGAGTGCAATTCCTCAAGGGATCAGTCGAGACGAATGGCTTCAAGCCCTTCCTCGGGCTCTGGTTGCAGGTTTTGTAAAAACAGACATTGAGTTTCAGCATAAAGGCAGGTTCTTTTTTTTCTTTTTAACTTCAGGGACGACTGTCACATTTGTTGTGATTGATGGATGGACAGTTACTGTTGCATCTGTGGGAGATTCTCGGTGCATATTGGACAGTCAGGGAGGTGTGGTTTCTCTGCTGACTGTTGATCACAGGCTTGAGGAGAATGAGGAAGAGAGGGAGCGAGTTACTGCCAGTGGGGGCGAGGTAGGAAGGCTCAATGTTTTTGGAGGAAATGAGGTTGGGCCACTTCGCTGTTGGCCAGGTGGATTATGTCTTTCTAGATCCATCGGTGACACAGATGTGGGAGAATTTATTGTTCCAATTCCGCATGTTAAGCAAGTGAAGCTTTCAACAGCTGGAGGGCGACTGTTAATAGCTTCTGACGGTATCTGGGACGCATTATCGTCTGATATGGCTGCCAAATCTTGTCGCGGTATACCCGCTGAGCTTGCTGCTAAGTTGGTCGTGAAGGAGGCTCTACGGTCGAGGGGCCTGAAGGATGATACCACATGTTTAGTTGTTGATATAATCCCTTCAGATCAACCTGTACCTCCACCAACTCCAAGTAGGAAACAAAATATGATAACTTCACTTATTTTTGGGAAGAAATCACAGAACTTTTCAAACAAAGCTGGGAATAATAAGCTTTCTGCTGTTGGAGTCGTGGAGGAATTATTTGAAGAGGGCTCTGCAGTGCTTGCTGAGAGGTTGGGCAAGGATTTTCCTTCGGACCCAAATTCTGGGATCGTCAAATGTGCAGTATGCCAAGTGAATCAACCCCCAAATGAAACTTTAACGGTGAATTCCGACCCTTTCTTCTCACCATCATTGAAGCCATGGGATGGCCCTATCCTCTGCCCAAACTGTCGGAAAAAGAAAGACGCAATGGAAGGGAAAAGACCAAGCAAACCCACGATAACCTCTTAA 1308 45.8 MSQIEVSMTRAPLVPLATLIGRELRKEKSEKPFVKFGQAALAKKGEDYFLIKPDCQRIPGNPSSSFSVFAIFDGHNGISAAIFAKEHLLGNVLSAIPQGISRDEWLQALPRALVAGFVKTDIEFQHKGRFFFFFLTSGTTVTFVVIDGWTVTVASVGDSRCILDSQGGVVSLLTVDHRLEENEEERERVTASGGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIGDTDVGEFIVPIPHVKQVKLSTAGGRLLIASDGIWDALSSDMAAKSCRGIPAELAAKLVVKEALRSRGLKDDTTCLVVDIIPSDQPVPPPTPSRKQNMITSLIFGKKSQNFSNKAGNNKLSAVGVVEELFEEGSAVLAERLGKDFPSDPNSGIVKCAVCQVNQPPNETLTVNSDPFFSPSLKPWDGPILCPNCRKKKDAMEGKRPSKPTITS 435
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 52290418 52292642 - Bda003911.1 Bda01g01636 1636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g01636 435 CDD PP2Cc 43 303 IPR001932 -
Bda01g01636 435 PANTHER PROTEIN PHOSPHATASE 2C 5-RELATED 2 434 - -
Bda01g01636 435 SMART PP2C_4 28 301 IPR001932 -
Bda01g01636 435 ProSiteProfiles PPM-type phosphatase domain profile. 25 303 IPR001932 -
Bda01g01636 435 SUPERFAMILY PP2C-like 43 303 IPR036457 -
Bda01g01636 435 Gene3D - 38 308 IPR036457 -
Bda01g01636 435 Pfam Protein phosphatase 2C 61 287 IPR001932 -
Bda01g01636 435 PANTHER ALPHABET, ISOFORM E-RELATED 2 434 - -
Bda01g01636 435 SMART PP2C_SIG_2 51 303 IPR001932 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g01636 Bda12g00431 CCT
Bda01g01636 Bda08g01091 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01636 Bda-Chr1:52290418 Bda08g01091 Bda-Chr8:24200855 0 dispersed
Bda01g01636 Bda-Chr1:52290418 Bda01g01642 Bda-Chr1:52409794 0 proximal
Bda01g01636 Bda-Chr1:52290418 Bda03g00218 Bda-Chr3:1692292 2.47E-144 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g01636 - - tcc:18600536 725.317