Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g01642 ATGAGCCAAATTGAAGTATCTATGACGAGGGCTCCTCTTGTTCCTCTCGCGACTCTAATAGGTCGGGAGCTTAGGAAAGAAAAGGGTGAGAAACCTTTTGTAAAGTTTGGACAGGCTGCTTTGGCAAAGAAAGGAGAGGATTACTTTCTCATAAAACCCGATTGCCAGCGAATTCCTGGGAACCCATCTTCATCATTTTCTGTCTTTGCGATTTTCGATGGCCACAATGGAATATCAGCCGCTATCTTTGCAAAGGAGCATTTATTGGGCAATGTCTTGAGTGCAATTCCTCAAGGGATCAGTCGAGACGAATGGCTTCAAGCCCTTCCTCGGGCTCTGGTTGCAGGTTTTGTAAAAACAGACATTGAGTTTCAGCATAAAGGTGAGACTTCAGGGACTACTGTCACATTGGTTGTGATTGATGGATGGACAGTTACTGTTGCATCTGTCGGAGATTCTCGGTGCATATTGGACAGTCAGGGAGGTGTGGTTTCTCTGCTGACTGTTGATCACAGGCTTGAGGAGAATGAGGAAGAGAGGGAGCGAGTCACTGCCAGTGGGGGCGAGGTAGGAAGGCTCAATGTTTTTGGAGGAAATGAGGTTGGGCCACTTCGCTGTTGGCCAGGTGGACTATGTCTTTCTAGATCCATCGGTGACACAGATGTGGGAGAATTTATTGTTCCAATTCCGCATGTTAAGCAAGTGAAGCTTTCAACGGCTGGAGGTCGACTGTTAATAGCTTCTGACGGTATCTGGGATGCATTATCGTCTGATATGGCTGCTAAATCTTGTCGCGGTTTACCCGCTGAGCTTGCTGCTAAGTTGGTCGTGAAGGAGGCTCTACGGTCGAGGGGCCTGAAGGACGATACCACATGTTTAGTTGTTGATATAATCCCTTCAGATCAACCTGTACCTCCACCAACTCCAAGTAGGAAACAAAACATGATAACTTCACTTATTTTTGGGAAGAAATCACAGAACTTTTCAAACAAAGCTGGGAATAATAAGCTTTCTGCTGTTGGAGTCGTGGAGGAATTATTTGAAGAGGGCTCTGCAGTGCTTGCTGAGAGGTTGGGCAAGGATTTTCCTTCGGACCCAAATTCTGGGATCGTCAAATGTGCAGTATGCCAAGTGAATCAACCCCCAAATGAAACTTTAACGGTGAATTCCGACCCTTTCTTCTCATCATCATTGAAGCCATGGGATGGCCCTATCCTCTGCACAAACTGTCGGAAAAAGAAAGACGCAATGGAAGGGAAAAGACCAAGCAAACCCACGATAATTTCT 1287 46.15 MSQIEVSMTRAPLVPLATLIGRELRKEKGEKPFVKFGQAALAKKGEDYFLIKPDCQRIPGNPSSSFSVFAIFDGHNGISAAIFAKEHLLGNVLSAIPQGISRDEWLQALPRALVAGFVKTDIEFQHKGETSGTTVTLVVIDGWTVTVASVGDSRCILDSQGGVVSLLTVDHRLEENEEERERVTASGGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIGDTDVGEFIVPIPHVKQVKLSTAGGRLLIASDGIWDALSSDMAAKSCRGLPAELAAKLVVKEALRSRGLKDDTTCLVVDIIPSDQPVPPPTPSRKQNMITSLIFGKKSQNFSNKAGNNKLSAVGVVEELFEEGSAVLAERLGKDFPSDPNSGIVKCAVCQVNQPPNETLTVNSDPFFSSSLKPWDGPILCTNCRKKKDAMEGKRPSKPTIIS 429
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 52409794 52411956 - Bda032968 Bda01g01642 1642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g01642 429 Gene3D - 38 302 IPR036457 -
Bda01g01642 429 CDD PP2Cc 43 297 IPR001932 -
Bda01g01642 429 Pfam Protein phosphatase 2C 61 280 IPR001932 -
Bda01g01642 429 PANTHER PROTEIN PHOSPHATASE 2C 5-RELATED 2 428 - -
Bda01g01642 429 SMART PP2C_4 23 295 IPR001932 -
Bda01g01642 429 ProSiteProfiles PPM-type phosphatase domain profile. 32 297 IPR001932 -
Bda01g01642 429 SMART PP2C_SIG_2 51 297 IPR001932 -
Bda01g01642 429 SUPERFAMILY PP2C-like 43 297 IPR036457 -
Bda01g01642 429 PANTHER ALPHABET, ISOFORM E-RELATED 2 428 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g01642 Bda11g00814 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01642 Bda-Chr1:52409794 Bda12g00431 Bda-Chr12:5305956 0 dispersed
Bda01g01636 Bda-Chr1:52290418 Bda01g01642 Bda-Chr1:52409794 0 proximal
Bda01g01642 Bda-Chr1:52409794 Bda08g01091 Bda-Chr8:24200855 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g01642 - - zju:107411796 728.783