Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda01g01647 | ATGGGTTGCGAGGGAGAGCTTCTGGTTCAAAACGTGTGCAAGTTATACGAGCAAATCTCGAAGCTGTCAAGCCTCGAACCCTCCAAAGAGGTGAACAAGCTCTTCACTGAGCTCGTCCTCGCCTGCATCCCACCAATCCCCATTGACGTAACCAAGCTCTGCGACAGGGTTCAGGAAATGAGGTCCAACCTCATTAAGGTATGTGGGGAAGCAGAGGGACAATTAGAGAGCCACTTCTCATCCATTTTAGGCTCCTTTTTAAACCCACTGGACCACCTCAATCTCTTCCCTTATTACTCAAATTATATCAAACTTGGCCAGCTTGAATTCAATATTCTCATGCAGCATTGCTCTCATTTTACGCCCAACAAAATTGCCTTCGTGGGTTCTGGCTCTCTCCCTCTTACCTCCATTGTTTTGGCCTCCAACCACCTTCCCACCGCCGTCTTTCACAATTACGACATCGACCCTTTAGCCAACTCTAAGGCTTTTCGTTTAGTCTCCTCTCATCCTGATCTATCCAAGAGAGTGTTTTTCCACACCACTGACATACTCAAAGTGACAGATGACTTGAAACAGTACGATGTGGTGTTTTTAGCAGCTCTTGTTGGCATGGATAAGGAAGAAAAAGGTATAGTAATTGATCATTTGTCTAACTTCATGGCTGCTGGATCTTATCTTATGTTGAGGAGTGCTCATGGCGCTCGAGGTTTTCTCTACCCAGTGGTTGAGGCTTGTGACTTACGAGGGTTTGATGTTCTGTCTGTGTTTCATCCAACTGATGAGGTCATAAACTCTGTGGTGATTGCTCGTAAATTTTATCTGCCTTCGTACGAGCTGCAAGAAAATCACCATGTTTTGCTGCCTAATAAGTGTTCTGAGATTCAGGTTTTTAATCCCCTTCCCCGCGGGAATATGCTTGAAGATTTCGCAATTGAAGCCGACCAGCTAACCTGA | 957 | 45.45 | MGCEGELLVQNVCKLYEQISKLSSLEPSKEVNKLFTELVLACIPPIPIDVTKLCDRVQEMRSNLIKVCGEAEGQLESHFSSILGSFLNPLDHLNLFPYYSNYIKLGQLEFNILMQHCSHFTPNKIAFVGSGSLPLTSIVLASNHLPTAVFHNYDIDPLANSKAFRLVSSHPDLSKRVFFHTTDILKVTDDLKQYDVVFLAALVGMDKEEKGIVIDHLSNFMAAGSYLMLRSAHGARGFLYPVVEACDLRGFDVLSVFHPTDEVINSVVIARKFYLPSYELQENHHVLLPNKCSEIQVFNPLPRGNMLEDFAIEADQLT | 318 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 52485267 | 52486223 | - | Bda003916.1 | Bda01g01647 | 1647 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda01g01647 | 318 | Pfam | Nicotianamine synthase protein | 6 | 273 | IPR004298 | GO:0030410|GO:0030418 | |
Bda01g01647 | 318 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 96 | 236 | IPR029063 | - | |
Bda01g01647 | 318 | PANTHER | NICOTIANAMINE SYNTHASE 3 | 1 | 316 | IPR004298 | GO:0030410|GO:0030418 | |
Bda01g01647 | 318 | Gene3D | Vaccinia Virus protein VP39 | 9 | 274 | IPR029063 | - | |
Bda01g01647 | 318 | PANTHER | SYNTHASE, PUTATIVE-RELATED | 1 | 316 | - | - | |
Bda01g01647 | 318 | ProSiteProfiles | Nicotianamine synthase (NAS)-like family profile. | 1 | 277 | IPR004298 | GO:0030410|GO:0030418 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda01g01647 | Bda12g00443 | CCT | |
Bda01g01647 | Bda07g01301 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda01g01647 | Bda-Chr1:52485267 | Bda12g00443 | Bda-Chr12:5441861 | 7.66E-145 | dispersed | |
Bda01g01647 | Bda-Chr1:52485267 | Bda01g01652 | Bda-Chr1:52568496 | 0 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda01g01647 | K05953 | - | jre:108981230 | 455.677 |