Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g01652 ATGGGTTGCGAGGGAGAGCTTCTGGTTCAAAACGTGTGCAAGTTATACGAGCAAATCTCGAAGCTGTCAAGCCTCGAACCCTCCAAAGAGGTGAACAAGCTCTTCACTGAGCTCGTCCTCGCCTGCATCCCACCAATCCCCATTGACGTAACCAAGCTCTGCGACAGGGTTCAGGAAATGAGGTCCAACCTCATTAAGGTATGTGGGGAAGCAGAGGGACATTTAGAGAGCCACTTCTCATCCATTTTAGGCTCCTTTTTAAACCCACTGGACCACCTCAATCTCTTCCCTTATTACTCAAATTATATCAAACTTGGCCAGCTTGAATTCAATATTCTCATGCAGCATTGCTCTCATTTTACGCCCAACAAAATTGCCTTCGTGGGTTCTGGCTCTCTCCCTCTTACCTCCATTGTTTTGGCCTCCAACCACCTTCCCACCGCCGTCTTTCACAATTACGACATCGACCCTTTAGCCAACTCTAAGGCTTTTCGTTTAGTCTCCTCTCATCCTGATCTATCCAAGAGAGTGTTTTTCCACACCACTGACATACTCAAAGTGACAGATGACTTGAAACAGTACGATGTGGTGTTTTTAGCAGCTCTTGTTGGCATGGATAAGGAAGAAAAAGGTATAGTAATTGATCATTTGTCTAACTTCATGGCTGCTGGATCTTATCTTATGTTGAGGAGTGCTCATGGCGCTCGAGGTTTTCTCTACCCAGTGGTTGAGGCTTGTGACTTACGAGGGTTTGATGTTCTGTCTGTGTTTCATCCAACTGATGAGGTCATAAACTCTGTGGTGATTGCTCGTAAATTTTATCTGCCTTCGTACGAGCTGCAAGAAAATCACCATGTTTTGCTGCCTAATAAGTGTTCTGAGATTCAGGTTTTTAATCCCCTTCCCCGCGGGAATATGCTTGAAGATTTCGCAATTGAAGCCGACCAGCTAACCTGA 957 45.45 MGCEGELLVQNVCKLYEQISKLSSLEPSKEVNKLFTELVLACIPPIPIDVTKLCDRVQEMRSNLIKVCGEAEGHLESHFSSILGSFLNPLDHLNLFPYYSNYIKLGQLEFNILMQHCSHFTPNKIAFVGSGSLPLTSIVLASNHLPTAVFHNYDIDPLANSKAFRLVSSHPDLSKRVFFHTTDILKVTDDLKQYDVVFLAALVGMDKEEKGIVIDHLSNFMAAGSYLMLRSAHGARGFLYPVVEACDLRGFDVLSVFHPTDEVINSVVIARKFYLPSYELQENHHVLLPNKCSEIQVFNPLPRGNMLEDFAIEADQLT 318
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 52568496 52569452 + Bda003923.1 Bda01g01652 1652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g01652 318 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 277 IPR004298 GO:0030410|GO:0030418
Bda01g01652 318 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 99 236 IPR029063 -
Bda01g01652 318 Gene3D Vaccinia Virus protein VP39 9 274 IPR029063 -
Bda01g01652 318 PANTHER SYNTHASE, PUTATIVE-RELATED 1 316 - -
Bda01g01652 318 Pfam Nicotianamine synthase protein 6 273 IPR004298 GO:0030410|GO:0030418
Bda01g01652 318 PANTHER NICOTIANAMINE SYNTHASE 3 1 316 IPR004298 GO:0030410|GO:0030418
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01652 Bda-Chr1:52568496 Bda12g00443 Bda-Chr12:5441861 8.74E-145 dispersed
Bda01g01647 Bda-Chr1:52485267 Bda01g01652 Bda-Chr1:52568496 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g01652 K05953 - rcu:8269821 455.677