Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g01658 GAAACTATAGAAATGACCAACAAGCTTTCTGACGAACTAACCCAGAAAACAGGCGTTTTTGGTCTCATGGTATGGGAAGTCATCGGGATTGCTGTCGGGTTGTTCATTGTAGTTATCCTATCCATTCTATCATTATGTCTCACTTCAAGAAAAAGGTCGGGGAAAGGTAGGGACGAGGTAACTCAGAGTCAAATCCCAACTGTCTCCAAGGAGATCAAAGAGGTTAGAGTGGAGCAATTATCAGCAGCTGAATTTGTTCCTCGCGACGGAATTCTTCTAACCATTCATGACAAATCGAGTGAAAAAGATTCAGACAAGGTTCTGGTACACCTTCAGGTGGGGAAGATGAAGAATGGAGATAATAGCAGTCAGTCCGGCTCGTTTCATCAGTTTGATAAAGATGGAGCTGGATCTCAATCAGGAGACGAAGGGAGTTCCGGCAAGATCACCATATACAGACCTTCATCTTCTTCCTCTTCATATCCGTTGACCGCTCCTTCCCCGCTTTCCGGCCTGCCTGAATTTTCTCACTTGGGTTGGGGCCACTGGTTTACGCTCAGAGATCTCGAGGTGGCCACCAATCGATTCTCCAAAGAAAATGTGCTTGGAGAGGGTGGCTATGGAGTTGTTTATCGGGGGCGTCTAGTCAACGGAACTGCAGTGGCTGTTAAAAGGATTCTCAATAATCTGGGTCAGGCAGAGAAAGAATTTAGAGCGGAAGTTGAAGCCATTGGTCACGTCCGCCATAAGAATTTGGTTCGTCTTCTTGGATATTGCATGGAAGGGACTCATAGAATGCTGGTTTATGAGTATGTGAACAATGGAAACTTAGAGCAATGGCTTCATGGAGCTATGCGTCAGCACGGGTACCTTACCTGGGAGGCTCGTACTAAAATTCTACTCGGCACTGCCAAAGCGCTTGCGTATTTGCACGAAGCCATTGAGCCTAAAGTGGTGCATCGTGACATTAAGTCGAGCAACATATTAATTGACGATGACTTCAACGCTAAGGTATCTGATTTTGGCCTGGCCAAGTTGCTTGGTGCTGGAAAAAGTCATGTCACGACTCGAGTTATGGGGACTTTCGGATATGTAGCTCCTGAATATGCAAATACTGGCCTTCTAAATGAGAAGAGTGATGTCTATAGCTTTGGGGTTGTGCTTCTTGAAACGATTACCGGAAGAGATCCTGTAGACTATGGACGCCCTGCACAGGAGGTAAATCTAGTGGATTGGTTAAAAATGATGGTTGGAAGCAGGCGATCAGAAGAAGTTGTTGATCCAAATATGGAGGTAAGGCCATCCACGAGAGCCTTAAAACGAGCGCTTTTGACTGCTTTGAGGTGCGTCGACCCCGATTCTGAAAAGCGACCGAAGATGGGTCAAATTGTTCGAATGCTTGAATCGGAGGAGTATCCACTACCACGAGAGGATCGAAGGCACCGAAGAACTCAGGCGAGCAGCATGGATACTGAATCGCAGAGGGAGTATTCCGATACCGACTTGGGTGAAAATCCCGTGTCGAGATCAGAAAGCAGGCGCGACCAACAAACGTAG 1557 46.69 ETIEMTNKLSDELTQKTGVFGLMVWEVIGIAVGLFIVVILSILSLCLTSRKRSGKGRDEVTQSQIPTVSKEIKEVRVEQLSAAEFVPRDGILLTIHDKSSEKDSDKVLVHLQVGKMKNGDNSSQSGSFHQFDKDGAGSQSGDEGSSGKITIYRPSSSSSSYPLTAPSPLSGLPEFSHLGWGHWFTLRDLEVATNRFSKENVLGEGGYGVVYRGRLVNGTAVAVKRILNNLGQAEKEFRAEVEAIGHVRHKNLVRLLGYCMEGTHRMLVYEYVNNGNLEQWLHGAMRQHGYLTWEARTKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDDFNAKVSDFGLAKLLGAGKSHVTTRVMGTFGYVAPEYANTGLLNEKSDVYSFGVVLLETITGRDPVDYGRPAQEVNLVDWLKMMVGSRRSEEVVDPNMEVRPSTRALKRALLTALRCVDPDSEKRPKMGQIVRMLESEEYPLPREDRRHRRTQASSMDTESQREYSDTDLGENPVSRSESRRDQQT 518
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 52705869 52708210 + Bda003933.1 Bda01g01658 1658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g01658 518 SUPERFAMILY Protein kinase-like (PK-like) 180 487 IPR011009 -
Bda01g01658 518 ProSitePatterns Protein kinases ATP-binding region signature. 202 224 IPR017441 GO:0005524
Bda01g01658 518 SMART serkin_6 196 467 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g01658 518 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 7 517 - -
Bda01g01658 518 CDD STKc_IRAK 202 468 - -
Bda01g01658 518 MobiDBLite consensus disorder prediction 453 499 - -
Bda01g01658 518 Pfam Protein kinase domain 197 465 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g01658 518 Gene3D Phosphorylase Kinase; domain 1 178 271 - -
Bda01g01658 518 PANTHER OS01G0323000 PROTEIN 7 517 - -
Bda01g01658 518 MobiDBLite consensus disorder prediction 116 164 - -
Bda01g01658 518 ProSitePatterns Serine/Threonine protein kinases active-site signature. 318 330 IPR008271 GO:0004672|GO:0006468
Bda01g01658 518 MobiDBLite consensus disorder prediction 453 518 - -
Bda01g01658 518 ProSiteProfiles Protein kinase domain profile. 196 475 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g01658 518 Gene3D Transferase(Phosphotransferase) domain 1 272 484 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01658 Bda-Chr1:52705869 Bda01g01668 Bda-Chr1:52811407 0 dispersed
Bda13g00324 Bda-Chr13:4119803 Bda01g01658 Bda-Chr1:52705869 3.87E-177 transposed
Bda01g01658 Bda-Chr1:52705869 Bda08g01098 Bda-Chr8:24441036 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69456 PF00069 Pkinase 2.10E-49 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g01658 - - mnt:21405451 866.3