Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda01g01658 | GAAACTATAGAAATGACCAACAAGCTTTCTGACGAACTAACCCAGAAAACAGGCGTTTTTGGTCTCATGGTATGGGAAGTCATCGGGATTGCTGTCGGGTTGTTCATTGTAGTTATCCTATCCATTCTATCATTATGTCTCACTTCAAGAAAAAGGTCGGGGAAAGGTAGGGACGAGGTAACTCAGAGTCAAATCCCAACTGTCTCCAAGGAGATCAAAGAGGTTAGAGTGGAGCAATTATCAGCAGCTGAATTTGTTCCTCGCGACGGAATTCTTCTAACCATTCATGACAAATCGAGTGAAAAAGATTCAGACAAGGTTCTGGTACACCTTCAGGTGGGGAAGATGAAGAATGGAGATAATAGCAGTCAGTCCGGCTCGTTTCATCAGTTTGATAAAGATGGAGCTGGATCTCAATCAGGAGACGAAGGGAGTTCCGGCAAGATCACCATATACAGACCTTCATCTTCTTCCTCTTCATATCCGTTGACCGCTCCTTCCCCGCTTTCCGGCCTGCCTGAATTTTCTCACTTGGGTTGGGGCCACTGGTTTACGCTCAGAGATCTCGAGGTGGCCACCAATCGATTCTCCAAAGAAAATGTGCTTGGAGAGGGTGGCTATGGAGTTGTTTATCGGGGGCGTCTAGTCAACGGAACTGCAGTGGCTGTTAAAAGGATTCTCAATAATCTGGGTCAGGCAGAGAAAGAATTTAGAGCGGAAGTTGAAGCCATTGGTCACGTCCGCCATAAGAATTTGGTTCGTCTTCTTGGATATTGCATGGAAGGGACTCATAGAATGCTGGTTTATGAGTATGTGAACAATGGAAACTTAGAGCAATGGCTTCATGGAGCTATGCGTCAGCACGGGTACCTTACCTGGGAGGCTCGTACTAAAATTCTACTCGGCACTGCCAAAGCGCTTGCGTATTTGCACGAAGCCATTGAGCCTAAAGTGGTGCATCGTGACATTAAGTCGAGCAACATATTAATTGACGATGACTTCAACGCTAAGGTATCTGATTTTGGCCTGGCCAAGTTGCTTGGTGCTGGAAAAAGTCATGTCACGACTCGAGTTATGGGGACTTTCGGATATGTAGCTCCTGAATATGCAAATACTGGCCTTCTAAATGAGAAGAGTGATGTCTATAGCTTTGGGGTTGTGCTTCTTGAAACGATTACCGGAAGAGATCCTGTAGACTATGGACGCCCTGCACAGGAGGTAAATCTAGTGGATTGGTTAAAAATGATGGTTGGAAGCAGGCGATCAGAAGAAGTTGTTGATCCAAATATGGAGGTAAGGCCATCCACGAGAGCCTTAAAACGAGCGCTTTTGACTGCTTTGAGGTGCGTCGACCCCGATTCTGAAAAGCGACCGAAGATGGGTCAAATTGTTCGAATGCTTGAATCGGAGGAGTATCCACTACCACGAGAGGATCGAAGGCACCGAAGAACTCAGGCGAGCAGCATGGATACTGAATCGCAGAGGGAGTATTCCGATACCGACTTGGGTGAAAATCCCGTGTCGAGATCAGAAAGCAGGCGCGACCAACAAACGTAG | 1557 | 46.69 | ETIEMTNKLSDELTQKTGVFGLMVWEVIGIAVGLFIVVILSILSLCLTSRKRSGKGRDEVTQSQIPTVSKEIKEVRVEQLSAAEFVPRDGILLTIHDKSSEKDSDKVLVHLQVGKMKNGDNSSQSGSFHQFDKDGAGSQSGDEGSSGKITIYRPSSSSSSYPLTAPSPLSGLPEFSHLGWGHWFTLRDLEVATNRFSKENVLGEGGYGVVYRGRLVNGTAVAVKRILNNLGQAEKEFRAEVEAIGHVRHKNLVRLLGYCMEGTHRMLVYEYVNNGNLEQWLHGAMRQHGYLTWEARTKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDDFNAKVSDFGLAKLLGAGKSHVTTRVMGTFGYVAPEYANTGLLNEKSDVYSFGVVLLETITGRDPVDYGRPAQEVNLVDWLKMMVGSRRSEEVVDPNMEVRPSTRALKRALLTALRCVDPDSEKRPKMGQIVRMLESEEYPLPREDRRHRRTQASSMDTESQREYSDTDLGENPVSRSESRRDQQT | 518 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 52705869 | 52708210 | + | Bda003933.1 | Bda01g01658 | 1658 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda01g01658 | 518 | SUPERFAMILY | Protein kinase-like (PK-like) | 180 | 487 | IPR011009 | - | |
Bda01g01658 | 518 | ProSitePatterns | Protein kinases ATP-binding region signature. | 202 | 224 | IPR017441 | GO:0005524 | |
Bda01g01658 | 518 | SMART | serkin_6 | 196 | 467 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda01g01658 | 518 | PANTHER | RECEPTOR-LIKE PROTEIN KINASE-RELATED | 7 | 517 | - | - | |
Bda01g01658 | 518 | CDD | STKc_IRAK | 202 | 468 | - | - | |
Bda01g01658 | 518 | MobiDBLite | consensus disorder prediction | 453 | 499 | - | - | |
Bda01g01658 | 518 | Pfam | Protein kinase domain | 197 | 465 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda01g01658 | 518 | Gene3D | Phosphorylase Kinase; domain 1 | 178 | 271 | - | - | |
Bda01g01658 | 518 | PANTHER | OS01G0323000 PROTEIN | 7 | 517 | - | - | |
Bda01g01658 | 518 | MobiDBLite | consensus disorder prediction | 116 | 164 | - | - | |
Bda01g01658 | 518 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 318 | 330 | IPR008271 | GO:0004672|GO:0006468 | |
Bda01g01658 | 518 | MobiDBLite | consensus disorder prediction | 453 | 518 | - | - | |
Bda01g01658 | 518 | ProSiteProfiles | Protein kinase domain profile. | 196 | 475 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda01g01658 | 518 | Gene3D | Transferase(Phosphotransferase) domain 1 | 272 | 484 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda01g01658 | Bda-Chr1:52705869 | Bda01g01668 | Bda-Chr1:52811407 | 0 | dispersed | |
Bda13g00324 | Bda-Chr13:4119803 | Bda01g01658 | Bda-Chr1:52705869 | 3.87E-177 | transposed | |
Bda01g01658 | Bda-Chr1:52705869 | Bda08g01098 | Bda-Chr8:24441036 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
69456 | PF00069 | Pkinase | 2.10E-49 | CL0016 | Bda | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda01g01658 | - | - | mnt:21405451 | 866.3 |