Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g01668 ATGACCAACAAGCTTTCTGACGAACTAACCCAGAAAACAGGCGTTTTTGGTCTCATGGTATGGGAAGTCATCGGGATTGCTGTCGGGTTGTTCATTGTAGTTATCCTATCCATTCTATCATTATGTCTCACTTCAAGAAAAAGGTCGGGGAAAGGTAGGGACGAGGTAACTCAGAGTCAAATCCCAACTGTCTCCAAGGAGATCAAAGAGGTTAGAGTGGAGCAATTATCAGCAGCTGAATTTGTTCCTCGCGACGGAATTCTTCTAACCATTCATGACAAATCGAGTGAAAAAGATTCAGACAAGGTTCTGGTACACCTTGAGGTGGGGAAGATGAAGAATGGAGATAATAGCAGTCAGTCCGGCTCGTTTCATCAGTTTGATAAAGATGGAGCTGGATCTCAATCAGGAGACGAAGGGAGTTCCGGCAAGATCACCATATACAGACCTTCATCTTCTTCCTCTTCATATCCGTTGACCGCTCCTTCCCCGCTTTCCGGCCTGCCTGAATTTTCTCACTTGGGTTGGGGCCACTGGTTTACGCTCAGAGATCTCGAGGTGGCCACCAATCGATTCTCCAAAGAAAATGTGCTTGGAGAGGGTGGCTATGGAGTTGTTTATCGGGGGCGTCTAGTCAACGGAACTGCAGTGGCTGTTAAAAGGATTCTCAATAATCTGGGTCAGGCAGAGAAAGAATTTAGAGCGGAAGTTGAAGCCATTGGTCACGTCCGCCATAAGAATTTGGTTCGTCTTCTTGGATATTGCATGGAAGGGACTCATAGAATGCTGGTTTATGAGTATGTGAACAATGGAAACTTAGAGCAATGGCTTCATGGAGCTATGCGTCAGCACGGGTACCTTACCTGGGAGGCTCGTACTAAAATTCTACTCGGCACTGCCAAAGCGCTTGCGTATTTGCACGAAGCCATTGAGCCTAAAGTGGTGCATCGTGACATTAAGTCGAGCAACATATTAATTGAGGATGACTTCAACGCTAAGGTATCTGATTTTGGCCTGGCCAAGTTGCTTGGTGCTGGAAAAAGTCATGTCACGACTCGAGTTATGGGGACTTTCGGATATGTAGCTCCTGAATATGCAAATACTGGCCTTCTAAATGAGAAGAGTGATGTCTATAGCTTTGGGGTTGTGCTTCTTGAAACGATTACCGGAAGAGATCCTGTAGACTATGGACGCCCTGCACAGGAGGTAAATCTAGTGGATTGGTTAAAAATGATGGTTGGAAGCAGGCGATCAGAAGAAGTTGTTGATCCAAATATGGAGGTAAGGCCATCCACGAGAGCCTTAAAACGCGCGCTTTTGACTGCTTTGAGGTGCGTCGACCCCGATTCTGAAAAGCGACCGAAGATGGGTCAAATTGTTCGAATGATTGAATCGGAGGAGTATCCACTACCACGAGAGGATCGAAGGCACCGAAGAACTCAGGCGAGCAGCATGGATACTGAATCGCAGAGGGAGTATTCCGATACCGACTTGGGTGAAAATCCCGTGTCGAGATCAGAAAGCAGGCGCGACCAACAAATGTAG 1545 46.8 MTNKLSDELTQKTGVFGLMVWEVIGIAVGLFIVVILSILSLCLTSRKRSGKGRDEVTQSQIPTVSKEIKEVRVEQLSAAEFVPRDGILLTIHDKSSEKDSDKVLVHLEVGKMKNGDNSSQSGSFHQFDKDGAGSQSGDEGSSGKITIYRPSSSSSSYPLTAPSPLSGLPEFSHLGWGHWFTLRDLEVATNRFSKENVLGEGGYGVVYRGRLVNGTAVAVKRILNNLGQAEKEFRAEVEAIGHVRHKNLVRLLGYCMEGTHRMLVYEYVNNGNLEQWLHGAMRQHGYLTWEARTKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIEDDFNAKVSDFGLAKLLGAGKSHVTTRVMGTFGYVAPEYANTGLLNEKSDVYSFGVVLLETITGRDPVDYGRPAQEVNLVDWLKMMVGSRRSEEVVDPNMEVRPSTRALKRALLTALRCVDPDSEKRPKMGQIVRMIESEEYPLPREDRRHRRTQASSMDTESQREYSDTDLGENPVSRSESRRDQQM 514
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 52811407 52813740 - Bda003945.1 Bda01g01668 1668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g01668 514 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 3 512 - -
Bda01g01668 514 CDD STKc_IRAK 198 464 - -
Bda01g01668 514 MobiDBLite consensus disorder prediction 449 495 - -
Bda01g01668 514 PANTHER OS01G0323000 PROTEIN 3 512 - -
Bda01g01668 514 SMART serkin_6 192 463 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g01668 514 ProSitePatterns Protein kinases ATP-binding region signature. 198 220 IPR017441 GO:0005524
Bda01g01668 514 Gene3D Phosphorylase Kinase; domain 1 174 267 - -
Bda01g01668 514 MobiDBLite consensus disorder prediction 114 160 - -
Bda01g01668 514 MobiDBLite consensus disorder prediction 449 514 - -
Bda01g01668 514 Gene3D Transferase(Phosphotransferase) domain 1 268 480 - -
Bda01g01668 514 ProSitePatterns Serine/Threonine protein kinases active-site signature. 314 326 IPR008271 GO:0004672|GO:0006468
Bda01g01668 514 Pfam Protein kinase domain 193 461 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g01668 514 ProSiteProfiles Protein kinase domain profile. 192 471 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g01668 514 SUPERFAMILY Protein kinase-like (PK-like) 176 481 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01658 Bda-Chr1:52705869 Bda01g01668 Bda-Chr1:52811407 0 dispersed
Bda01g01668 Bda-Chr1:52811407 Bda14g01440 Bda-Chr14:18817693 0 dispersed
Bda01g01668 Bda-Chr1:52811407 Bda08g01098 Bda-Chr8:24441036 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69457 PF00069 Pkinase 4.80E-49 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g01668 - - mnt:21405451 863.603