Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda01g01668 | ATGACCAACAAGCTTTCTGACGAACTAACCCAGAAAACAGGCGTTTTTGGTCTCATGGTATGGGAAGTCATCGGGATTGCTGTCGGGTTGTTCATTGTAGTTATCCTATCCATTCTATCATTATGTCTCACTTCAAGAAAAAGGTCGGGGAAAGGTAGGGACGAGGTAACTCAGAGTCAAATCCCAACTGTCTCCAAGGAGATCAAAGAGGTTAGAGTGGAGCAATTATCAGCAGCTGAATTTGTTCCTCGCGACGGAATTCTTCTAACCATTCATGACAAATCGAGTGAAAAAGATTCAGACAAGGTTCTGGTACACCTTGAGGTGGGGAAGATGAAGAATGGAGATAATAGCAGTCAGTCCGGCTCGTTTCATCAGTTTGATAAAGATGGAGCTGGATCTCAATCAGGAGACGAAGGGAGTTCCGGCAAGATCACCATATACAGACCTTCATCTTCTTCCTCTTCATATCCGTTGACCGCTCCTTCCCCGCTTTCCGGCCTGCCTGAATTTTCTCACTTGGGTTGGGGCCACTGGTTTACGCTCAGAGATCTCGAGGTGGCCACCAATCGATTCTCCAAAGAAAATGTGCTTGGAGAGGGTGGCTATGGAGTTGTTTATCGGGGGCGTCTAGTCAACGGAACTGCAGTGGCTGTTAAAAGGATTCTCAATAATCTGGGTCAGGCAGAGAAAGAATTTAGAGCGGAAGTTGAAGCCATTGGTCACGTCCGCCATAAGAATTTGGTTCGTCTTCTTGGATATTGCATGGAAGGGACTCATAGAATGCTGGTTTATGAGTATGTGAACAATGGAAACTTAGAGCAATGGCTTCATGGAGCTATGCGTCAGCACGGGTACCTTACCTGGGAGGCTCGTACTAAAATTCTACTCGGCACTGCCAAAGCGCTTGCGTATTTGCACGAAGCCATTGAGCCTAAAGTGGTGCATCGTGACATTAAGTCGAGCAACATATTAATTGAGGATGACTTCAACGCTAAGGTATCTGATTTTGGCCTGGCCAAGTTGCTTGGTGCTGGAAAAAGTCATGTCACGACTCGAGTTATGGGGACTTTCGGATATGTAGCTCCTGAATATGCAAATACTGGCCTTCTAAATGAGAAGAGTGATGTCTATAGCTTTGGGGTTGTGCTTCTTGAAACGATTACCGGAAGAGATCCTGTAGACTATGGACGCCCTGCACAGGAGGTAAATCTAGTGGATTGGTTAAAAATGATGGTTGGAAGCAGGCGATCAGAAGAAGTTGTTGATCCAAATATGGAGGTAAGGCCATCCACGAGAGCCTTAAAACGCGCGCTTTTGACTGCTTTGAGGTGCGTCGACCCCGATTCTGAAAAGCGACCGAAGATGGGTCAAATTGTTCGAATGATTGAATCGGAGGAGTATCCACTACCACGAGAGGATCGAAGGCACCGAAGAACTCAGGCGAGCAGCATGGATACTGAATCGCAGAGGGAGTATTCCGATACCGACTTGGGTGAAAATCCCGTGTCGAGATCAGAAAGCAGGCGCGACCAACAAATGTAG | 1545 | 46.8 | MTNKLSDELTQKTGVFGLMVWEVIGIAVGLFIVVILSILSLCLTSRKRSGKGRDEVTQSQIPTVSKEIKEVRVEQLSAAEFVPRDGILLTIHDKSSEKDSDKVLVHLEVGKMKNGDNSSQSGSFHQFDKDGAGSQSGDEGSSGKITIYRPSSSSSSYPLTAPSPLSGLPEFSHLGWGHWFTLRDLEVATNRFSKENVLGEGGYGVVYRGRLVNGTAVAVKRILNNLGQAEKEFRAEVEAIGHVRHKNLVRLLGYCMEGTHRMLVYEYVNNGNLEQWLHGAMRQHGYLTWEARTKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIEDDFNAKVSDFGLAKLLGAGKSHVTTRVMGTFGYVAPEYANTGLLNEKSDVYSFGVVLLETITGRDPVDYGRPAQEVNLVDWLKMMVGSRRSEEVVDPNMEVRPSTRALKRALLTALRCVDPDSEKRPKMGQIVRMIESEEYPLPREDRRHRRTQASSMDTESQREYSDTDLGENPVSRSESRRDQQM | 514 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 52811407 | 52813740 | - | Bda003945.1 | Bda01g01668 | 1668 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda01g01668 | 514 | PANTHER | RECEPTOR-LIKE PROTEIN KINASE-RELATED | 3 | 512 | - | - | |
Bda01g01668 | 514 | CDD | STKc_IRAK | 198 | 464 | - | - | |
Bda01g01668 | 514 | MobiDBLite | consensus disorder prediction | 449 | 495 | - | - | |
Bda01g01668 | 514 | PANTHER | OS01G0323000 PROTEIN | 3 | 512 | - | - | |
Bda01g01668 | 514 | SMART | serkin_6 | 192 | 463 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda01g01668 | 514 | ProSitePatterns | Protein kinases ATP-binding region signature. | 198 | 220 | IPR017441 | GO:0005524 | |
Bda01g01668 | 514 | Gene3D | Phosphorylase Kinase; domain 1 | 174 | 267 | - | - | |
Bda01g01668 | 514 | MobiDBLite | consensus disorder prediction | 114 | 160 | - | - | |
Bda01g01668 | 514 | MobiDBLite | consensus disorder prediction | 449 | 514 | - | - | |
Bda01g01668 | 514 | Gene3D | Transferase(Phosphotransferase) domain 1 | 268 | 480 | - | - | |
Bda01g01668 | 514 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 314 | 326 | IPR008271 | GO:0004672|GO:0006468 | |
Bda01g01668 | 514 | Pfam | Protein kinase domain | 193 | 461 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda01g01668 | 514 | ProSiteProfiles | Protein kinase domain profile. | 192 | 471 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda01g01668 | 514 | SUPERFAMILY | Protein kinase-like (PK-like) | 176 | 481 | IPR011009 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda01g01658 | Bda-Chr1:52705869 | Bda01g01668 | Bda-Chr1:52811407 | 0 | dispersed | |
Bda01g01668 | Bda-Chr1:52811407 | Bda14g01440 | Bda-Chr14:18817693 | 0 | dispersed | |
Bda01g01668 | Bda-Chr1:52811407 | Bda08g01098 | Bda-Chr8:24441036 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
69457 | PF00069 | Pkinase | 4.80E-49 | CL0016 | Bda | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda01g01668 | - | - | mnt:21405451 | 863.603 |