Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g01682 ATGGCTGATTTTCAGACCTCGACTCACCGAGCTAACTGGATTTTCACTCCTCAACGCCTGGTTCAGAAGTACGAAGTTGCTAATCAAGGAGCTATCCAAATGCTGGATAAGTATGGAGCAACTTTGATGGAAGTAGATGTTGATGGCTCATTGTCGTATCCTGATCCACAAATGAACTTAAAAGAAAATGGGGATAAACATTCTCGTCCCAAACCTCTAACTGTTGAAGAGGAGCAGTTTATGCGGGTATTTTATGAGAATAAACTTCAAGAAGTATGCAACAACTTTCACTTTCCTCATAAAATTCAGGCAACTGCTCTTTTATATTTCAAAAGGTTTTATTTACAATGGTCGGTCATGCAACATCATCCCAAAAACATTATGTTAACCTGCATTTATGCAGCATGTAAAATAGAAGAAAATCATGTCTCGGCAGAGGAGCTTGGTAAGGGAATCTCACAAGATCATCAAATGATTCTCAATAATGAGATGATAAGTTTGGATTTTGATCTCATTGTTTATGCTCCATATCGATCCATTGAAGGCTATGTCAACGATATTGAGGAATTCTTCCAAACAAATGACGATCAGCTGCAATTGCTGAAGGAAACAGCTGCTGCAGAAGTTGATAAAATTATGCTAACAGATGCACCACTTTTGTTTCCTCCTGGGCAGTTGGCATTGGCTGCTTTGCGAAGTTCAAATATGATTCACAGAGTTATTGACTTTGAGAGATACCTGAGAAGTATTCTCTCTCGTCAAAGCTCTGCATATACCTATTCTGAACTGAATGAAGCGCTAAATTCAATCGATTCTTGGGCAAGTAGATATAAGTTTCCTTCAGAAAAAGATTTGAAGCACATCAACAGAAAACTTAAGTCTTGTTGGGGTCTTAGTTCACATGATGATAAGAAAAGGGAGAAGAAATCAAAACACAAGTCGAAGAAGAGTTCGGGCGGAACACAAAATAATGAACTGTATGTTTGTCTTACATTAATATTTTTGTTGCTCATCAATTTTTTTTTTCTTTTATCATTTTACCTTCACCATTGTCAATGTTTTTTTTTTGTTTGTTTATTTAGCAATCATGAATAA 1095 36.53 MADFQTSTHRANWIFTPQRLVQKYEVANQGAIQMLDKYGATLMEVDVDGSLSYPDPQMNLKENGDKHSRPKPLTVEEEQFMRVFYENKLQEVCNNFHFPHKIQATALLYFKRFYLQWSVMQHHPKNIMLTCIYAACKIEENHVSAEELGKGISQDHQMILNNEMISLDFDLIVYAPYRSIEGYVNDIEEFFQTNDDQLQLLKETAAAEVDKIMLTDAPLLFPPGQLALAALRSSNMIHRVIDFERYLRSILSRQSSAYTYSELNEALNSIDSWASRYKFPSEKDLKHINRKLKSCWGLSSHDDKKREKKSKHKSKKSSGGTQNNELYVCLTLIFLLLINFFFLLSFYLHHCQCFFFVCLFSNHE 364
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 52881263 52889041 - Bda003957.1 Bda01g01682 1682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g01682 364 Pfam Cyclin, N-terminal domain 72 164 IPR006671 -
Bda01g01682 364 CDD CYCLIN 81 148 IPR013763 -
Bda01g01682 364 Pfam Cyclin C-terminal domain 176 272 IPR031658 -
Bda01g01682 364 Gene3D - 174 275 - -
Bda01g01682 364 SUPERFAMILY Cyclin-like 176 298 IPR036915 -
Bda01g01682 364 PANTHER CYCLIN 1 324 IPR043198 GO:0006357|GO:0016538
Bda01g01682 364 MobiDBLite consensus disorder prediction 299 320 - -
Bda01g01682 364 SMART cyclin_7 87 168 IPR013763 -
Bda01g01682 364 Gene3D - 64 172 - -
Bda01g01682 364 SUPERFAMILY Cyclin-like 66 173 IPR036915 -
Bda01g01682 364 PANTHER CYCLIN-H 1 324 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01682 Bda-Chr1:52881263 Bda05g00739 Bda-Chr5:55749736 1.02E-10 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g01682 K06634 - qsu:111995678 525.398