Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g01685 ATGCAAGACATTTTTGGGACAGTTCGCCGCTCGCTGGTGTTCCGTTCGTCTCCTGGTAACGAAGAGCAGCAGTCGCCTCCTATTGGATCCGGAACCCTAGTTGATAGGATCAATTCTTGCATTCGTAAATCTAAAGTCTTTTCCATCCACCCCGTTCCCAAGGAAAATGTTCCCGCCATTCGATGGCGGAAGGGCGAGTTGATTGGATGCGGGGCCTTTGGTCGCGTCTACATGGGAATGAATCTTGATTCCGGAGAGCTTCTCGCTGTCAAACAGGTTTTGATCGCATCAAACTGCTCTTCAAAAGAGAAAGCGCAGGCTCATATAAAGGAGCTCGAAGAAGAAGTGAAGCTTCTTAAAGATCTGTCCCATCCAAATATAGTTAGATACTTGGGTACAATTAGGGAGGAGGATTCTTTAAACATTTTGCTCGAATTTGTCCCTGGTGGGTCCATTTCATCGCTCTTGGGGAAATTTGGAGCTTTTCCTGAGGCTGTTATACAGGCGTACACAAGGCAGTTGTTATTAGGCTTGGAATACTTGCACAAAAATGTTATCATACATAGGGACATTAAAGGAGCAAATATTCTTGTTGATAACAAGGGATGCATTAAGCTTGCAGATTTTGGTGCATCAAAACAGGTTGTTGAGCTGGCTACTATTTCTGGTGCCAAATCTATGAAAGGTACCCCTTACTGGATGGCTCCTGAAGTAATTATTCAGACTGGGCATAGCTTTTCTGCCGATATATGGAGTGTTGGATGCACTGTGATTGAAATGGCCACGGGAAAACCTCCTTGGAGCCAACAATACCAAGAGGTAGCTGCTCTCTTTCATGTTGGGACAACAAAGTCTCATCCACCAATTCCTGAGCATCTCTCTGCTGAAGCAAAAGATTTTCTGCTGAAATGTTTGCAAGAAGAACCAAACCTAAGACCAACTGCATCTGAGCTGCTGAAGGTGATTAAGATTTCATTGGAATTTTCTATTTTCATGATTTTACAAAGAATACAGCAGTTAGTAACTAACTTTTGGTGGATTCTGCAAACATATATCTATTGCATTTCAGAAAATGCTAAAGAAGTTAAAAATTTAATTATCATTTGCTCCCATGTATTTTTCAGGGGAACAAACGTCAATACTGAATCAACATGCCATATTGATGTCAAAGTTGATTCCATGTCTGATGAAGCAAGGCTTGGGATGGATTTTCCTGAAAGCTTTAAGAGTTTTAACCCAATGTGCGAGCCAACTGATGGCTGGGGATGCGAATTTGTTGGAACTTCAAGAGTGGAACAAAGCAAAATACAATTTGGCGCAAATCAACAAGTTCATGTGTCAGCTGCCCACACTGACACACTTGGTGAGGATAAAAACTTTTCATTTGCTTGTGGACCATCACTCTTTGAAGATGATGATGAACTAACGGAGTCCAAAATTACTGCTTTTTTGGATGAAAAGGCTCTGGAACTGAAGAAACTGCAGACACCTTTATACGAGGAGTTCTATAACAGTTTAAATGATCCATGTCCTTCCGGTCTAGTTGAAAATATGCATGATGAGAATCCTTCCAAGTACTTAAAATTGCCTCCAAAAAGCAGGTCACCAAATCAAGGTTCGAATGGAACCCCATCTACAGCTTCCGATCCTTTGACCACTGGAATCCCTAGTAGAAATAGTACATGCACGTCAAATGTCTGTAATGCAAATGATCAAAGTTCACATGAAATTTCATCTCCTCCAGTTAATGACTGGAAAGAGCTTCTAGTTGACGATCAGCTAGAACAAAGTGGCCCAAGTGCTCACTTTTCCAACATACAGAGAAAGTGGAAAGAAGAGCTTGACCAGGAACTTGAAAGAAAAAGAGAAATGATGCGGCAGGCCGGTGTGGGAGGAAAAACATCATCTCCCAAGGATCGAGCCTTCGGCAGACAGCGGGAGAGGACAAGGTTTGCATCTCCAGGAAAATAA 1971 42.21 MQDIFGTVRRSLVFRSSPGNEEQQSPPIGSGTLVDRINSCIRKSKVFSIHPVPKENVPAIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIASNCSSKEKAQAHIKELEEEVKLLKDLSHPNIVRYLGTIREEDSLNILLEFVPGGSISSLLGKFGAFPEAVIQAYTRQLLLGLEYLHKNVIIHRDIKGANILVDNKGCIKLADFGASKQVVELATISGAKSMKGTPYWMAPEVIIQTGHSFSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHVGTTKSHPPIPEHLSAEAKDFLLKCLQEEPNLRPTASELLKVIKISLEFSIFMILQRIQQLVTNFWWILQTYIYCISENAKEVKNLIIICSHVFFRGTNVNTESTCHIDVKVDSMSDEARLGMDFPESFKSFNPMCEPTDGWGCEFVGTSRVEQSKIQFGANQQVHVSAAHTDTLGEDKNFSFACGPSLFEDDDELTESKITAFLDEKALELKKLQTPLYEEFYNSLNDPCPSGLVENMHDENPSKYLKLPPKSRSPNQGSNGTPSTASDPLTTGIPSRNSTCTSNVCNANDQSSHEISSPPVNDWKELLVDDQLEQSGPSAHFSNIQRKWKEELDQELERKREMMRQAGVGGKTSSPKDRAFGRQRERTRFASPGK 656
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 52913601 52918459 - Bda003960.2 Bda01g01685 1685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g01685 656 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 611 - -
Bda01g01685 656 Coils Coil 607 627 - -
Bda01g01685 656 MobiDBLite consensus disorder prediction 621 656 - -
Bda01g01685 656 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE NPK1-LIKE ISOFORM X1 1 611 - -
Bda01g01685 656 Coils Coil 102 122 - -
Bda01g01685 656 Pfam Protein kinase domain 63 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g01685 656 MobiDBLite consensus disorder prediction 513 582 - -
Bda01g01685 656 SUPERFAMILY Protein kinase-like (PK-like) 61 325 IPR011009 -
Bda01g01685 656 ProSitePatterns Serine/Threonine protein kinases active-site signature. 186 198 IPR008271 GO:0004672|GO:0006468
Bda01g01685 656 Gene3D Transferase(Phosphotransferase) domain 1 61 341 - -
Bda01g01685 656 MobiDBLite consensus disorder prediction 639 656 - -
Bda01g01685 656 ProSiteProfiles Protein kinase domain profile. 62 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g01685 656 SMART serkin_6 62 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g01685 656 MobiDBLite consensus disorder prediction 531 580 - -
Bda01g01685 656 CDD STKc_MAPKKK 61 320 - -
Bda01g01685 656 ProSitePatterns Protein kinases ATP-binding region signature. 68 91 IPR017441 GO:0005524
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g01685 Bda08g01320 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01685 Bda-Chr1:52913601 Bda04g00372 Bda-Chr4:50125331 1.19E-88 dispersed
Bda05g00425 Bda-Chr5:49958850 Bda01g01685 Bda-Chr1:52913601 1.45E-58 dispersed
Bda12g00128 Bda-Chr12:1152668 Bda01g01685 Bda-Chr1:52913601 1.22E-61 dispersed
Bda01g01685 Bda-Chr1:52913601 Bda05g00241 Bda-Chr5:41124291 2.23E-161 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69458 PF00069 Pkinase 2.60E-69 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g01685 K20606 - mnt:21384788 824.313