Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g01693 ATGGAGGCACTAGAGACCATACCACTTAAAGGTTCTTCCTCGTTTCTCAGCACCAGCACCATTATTGCTCTCGCTGTGTTCTTCACTCTCCTCTGTGCCTGCATCGTTATTGGTCATCTCTTGGAAGAGAATCGGTGGGCAAATGAGTCGATAACCGCTCTTCTCTTGGGCTTGGTAGCAGGAGTTGTGGTGTTGCTTATTAGTAAGTTTCATAGTTCGAGAATTTTAGTGTTCAGCGAGAACTTGTTCTTCCTGTATTTGCTTCCACCAATCATTTTCAATGCTGGTTTCCAGGTAAAAAAGAAGCAGTTTTTCAAGAACTTTACTACAATCTTGTTGTTTGGAGCATTTGGAACGATTATTTCTTTCTGCATCGTGTCCACATGTGCCTATTTTATTTTAAAAAAAATTGGCGTGTCAGGTCTGACCGTTCAGGACTACTTAGCTGTTGGTGCAATATTATCTGCAACTGATTCAGTTTGTACATTACAGGTTCTCAGTCAAGATGACACGCCTTTTCTTTACAGTGTCGTGTTTGGAGAAGGAGTGGTGAATGATGCTACTTCAATTGTCATTTTCAATGCAGTGCAATCACTTAACTTAGACAAGATCGATGCTATTACGGCTCTAAGATTGTTGGGGCAGTTTCTTTACCTGTACTTTACCAGCACTGCTCTTGGAGTAGTGGTGGGTCTTATAAGCGCTTTTATCATAAAAACACTTTATTTTGGAAGGCATTCCACTGATCGTGAAGTTGCACTGATGATGCTAATGGCTTATTTATCATATATGTTGGCTGAGCTTTTAAATCTGAGTGGAATTCTTACTATTTTCTTCTGCGGAATAGTCATGTCCCATTACACGTGGCACAATGTGACTGAAAGCTCACGAATAACAACCAAGCATGCATTTGCGACAATTTCATTTATTGCGGAGACTTTTATCTTCCTTTACGTGGGTATGGATGCCTTGGACATTGACAAATGGAAGGAAAGCCAGGCAAGTGCAGGAACTTCAATCTCCATTAGTGCCACTTTCTTTGCTCTAGTGCTAATCGGAAGAGCGGCATTTGTGTTCCCTATCTCCAACATTGGCAATTATTTCAGTAAAAGAGACAGTTCGAAAATTGAGTTTAGACAACAGTTCATAATATGGTGGGCTGGCGTCATGAGAGGTGCTGTTACTGTTGCTTTGGTTTATAGCCAGTTTTCTTCCTCGGACGACTCAGAATCGCAGGCCAACGCCTTAATGATCACTTGTACAATCATTGTTGTTTTATTCAGCACAATTGTATTTGGGTCAGCAACAAAGCCTCTAATTGAAGCAGTGCTCTTAAGACATGCAAAACCACTGCTTTCAAATGCAACTGACATTCCAAGCCTCGAAGAATTACACATCCCGTTCTTCGACAATGGAGGTACCGATGGTGATCAAGGCAACAGCACAAGACCGCCAAAGGTTGGTAGTCTCCGTCGTTTGATAACTAACCCTACTTCGACTGTTCATTATTTTTGGCGTAAATTCGACGATAAGTTCATGAGACCAGTGTTCGGTGGCCGGGGTTTTGTTCCATTCGTCCCGGGGTCGCCAAGTGGCGCAAGAGATGAAACCTCTTGA 1617 42.24 MEALETIPLKGSSSFLSTSTIIALAVFFTLLCACIVIGHLLEENRWANESITALLLGLVAGVVVLLISKFHSSRILVFSENLFFLYLLPPIIFNAGFQVKKKQFFKNFTTILLFGAFGTIISFCIVSTCAYFILKKIGVSGLTVQDYLAVGAILSATDSVCTLQVLSQDDTPFLYSVVFGEGVVNDATSIVIFNAVQSLNLDKIDAITALRLLGQFLYLYFTSTALGVVVGLISAFIIKTLYFGRHSTDREVALMMLMAYLSYMLAELLNLSGILTIFFCGIVMSHYTWHNVTESSRITTKHAFATISFIAETFIFLYVGMDALDIDKWKESQASAGTSISISATFFALVLIGRAAFVFPISNIGNYFSKRDSSKIEFRQQFIIWWAGVMRGAVTVALVYSQFSSSDDSESQANALMITCTIIVVLFSTIVFGSATKPLIEAVLLRHAKPLLSNATDIPSLEELHIPFFDNGGTDGDQGNSTRPPKVGSLRRLITNPTSTVHYFWRKFDDKFMRPVFGGRGFVPFVPGSPSGARDETS 538
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 52986801 52992251 + Bda003970.1 Bda01g01693 1693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g01693 538 PRINTS Na+/H+ exchanger signature 111 119 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bda01g01693 538 PRINTS Na+/H+ exchanger signature 82 93 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bda01g01693 538 PRINTS Na+/H+ exchanger signature 151 161 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bda01g01693 538 PRINTS Na+/H+ exchanger signature 96 110 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bda01g01693 538 PANTHER SODIUM/HYDROGEN EXCHANGER 9 537 - -
Bda01g01693 538 Pfam Sodium/hydrogen exchanger family 27 441 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Bda01g01693 538 PANTHER SODIUM/HYDROGEN EXCHANGER 9 537 IPR018422 GO:0006812|GO:0015299|GO:0016021
Bda01g01693 538 Gene3D - 142 195 - -
Bda01g01693 538 TIGRFAM b_cpa1: sodium/hydrogen exchanger 3 25 447 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01693 Bda-Chr1:52986801 Bda01g01709 Bda-Chr1:53095137 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g01693 K14724 - jre:108988829 795.038