Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g01709 ATGTCTCCGATGTTGAGCTATGTACTATCAAGAGTGCAAACGTTATCCACTTCCGATCATTCCTCTATTGTGTCCATGAATTTATTTGTGGCGCTACTTTGTGGTTGTATTGTGATTGGTCATCTTCTCGAGGAGAATCGCTGGATGAATGAGTCAATTACGGCTCTATTGATTGGACTAAGCACTGGAGTCGTCATTCTGCTCATTAGTGGGGGGAAAAATTCACATTTACTAGTCTTCAGTGAAGATCTCTTTTTTATATATCTCCTGCCACCTATTATATTCAATGCCGGGTTCCAGGTGAAAAAGAAGCAGTTTTTTAGAAACTTTAGTACAATTATGCTCTTTGGGGCAATTGGTACATTGATCTCTTGTTGCGTCATTTCATTCGGTGTTATACAATTTTTTAAGAAATTGGATATCGGATCACTGGACATTGGAGATTATTTAGCAATTGGTGCAATTTTTATTTTGAATCAGGATGAGACACCTTTACTCTACAGTCTTGTATTTGGAGAAGGTGTGGTAAATGATGCTACATCAGTGGTGCTATTCAATGCAATCCAGAGCTTTGATCTCTCCCATATTGATTCCCGGATTGCATTACAATTTATTGGCAGCTTCTTTTACTTATTTTTTACAAGCACTGTACTGGGTGTGATGACCGGTTTGCTCAGTGCTTTCATTATCAAAAAGCTATATTTTGGCAGGCATTCTACAGACCGCGAGGTTGCTTTAATGATATTAATGGCATACCTTTCATATATGATGGCTGAATTGTTCTATTTAAGTGGCATTCTCACGGTGTTCTTTTGTGGGATCGTGATGTCACATTACACCTGGCACAATGTCACTGAAAGTTCACGAGTTACCACAAAGCATGCTTTTGCTACATTGTCATTTGTAGCTGAGATCTTTATCTTCCTTTACGTTGGCATGGACGCATTGGACATTGAAAAGTGGAGATTTGTCGGCCACAGTCCTGGGACTTCTTTGGCAGTAAGTTCCATACTTTTAGCTCTGGTTATGGCTGGAAGAGCTGCTTTTGTTTTTCCATTATCATTTTTGTCCAACTTAGCAAAAAAATCACCCGCTGAGAAAATTAGCTTCAGGCAGCAAGTGATAATATGGTGGGCTGGTCTGATGAGAGGTGCCGTCTCAATGGCTCTTGCTTATAATCAGTTCACAAGATCAGGACACACTCAATTGCGTGGGAATGCAATCATGATCACAAGCACTATAACAGTCGTTCTCTTCAGCACAGTGTTGTTTGGGTTAATGACCAAGCCTCTCATTAGGTTCTTGTTGCCTAATCCGAAACCCACATCGAGCATGGTTTTGTCCGATCCATCCACTCCCAAATCATTTATCATTCCGCTTCTCGGAGGCAGTCAAGACTCTGAAGTCGATACCGGGGCCCAAGAAATTCCCCGTCCGAGCAGTATTCGAGCCCTTCTAACCACTCCAACACACAATGTTCATAGGTACTGGCGTAAATTTGACGATGCATTTATGCGGCCGGTGTTTGGCGGACGGGGTTTTGTTCCTTATGTGCCTGGATCGCCAACAGAGAGGAGTCCCAACCAATGGCGGTGA 1596 42.04 MSPMLSYVLSRVQTLSTSDHSSIVSMNLFVALLCGCIVIGHLLEENRWMNESITALLIGLSTGVVILLISGGKNSHLLVFSEDLFFIYLLPPIIFNAGFQVKKKQFFRNFSTIMLFGAIGTLISCCVISFGVIQFFKKLDIGSLDIGDYLAIGAIFILNQDETPLLYSLVFGEGVVNDATSVVLFNAIQSFDLSHIDSRIALQFIGSFFYLFFTSTVLGVMTGLLSAFIIKKLYFGRHSTDREVALMILMAYLSYMMAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHAFATLSFVAEIFIFLYVGMDALDIEKWRFVGHSPGTSLAVSSILLALVMAGRAAFVFPLSFLSNLAKKSPAEKISFRQQVIIWWAGLMRGAVSMALAYNQFTRSGHTQLRGNAIMITSTITVVLFSTVLFGLMTKPLIRFLLPNPKPTSSMVLSDPSTPKSFIIPLLGGSQDSEVDTGAQEIPRPSSIRALLTTPTHNVHRYWRKFDDAFMRPVFGGRGFVPYVPGSPTERSPNQWR 531
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 53095137 53100142 - Bda003982.1 Bda01g01709 1709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g01709 531 Pfam Sodium/hydrogen exchanger family 28 432 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Bda01g01709 531 Gene3D - 132 187 - -
Bda01g01709 531 PRINTS Na+/H+ exchanger signature 113 121 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bda01g01709 531 PRINTS Na+/H+ exchanger signature 98 112 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bda01g01709 531 PRINTS Na+/H+ exchanger signature 84 95 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bda01g01709 531 PANTHER SODIUM/HYDROGEN EXCHANGER 2 7 530 - -
Bda01g01709 531 PANTHER SODIUM/HYDROGEN EXCHANGER 7 530 IPR018422 GO:0006812|GO:0015299|GO:0016021
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01693 Bda-Chr1:52986801 Bda01g01709 Bda-Chr1:53095137 0 dispersed
Bda01g01709 Bda-Chr1:53095137 Bda08g00277 Bda-Chr8:2892266 0 dispersed
Bda13g00908 Bda-Chr13:10822746 Bda01g01709 Bda-Chr1:53095137 2.04E-11 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g01709 - - zju:107412105 892.108