Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda01g01709 | ATGTCTCCGATGTTGAGCTATGTACTATCAAGAGTGCAAACGTTATCCACTTCCGATCATTCCTCTATTGTGTCCATGAATTTATTTGTGGCGCTACTTTGTGGTTGTATTGTGATTGGTCATCTTCTCGAGGAGAATCGCTGGATGAATGAGTCAATTACGGCTCTATTGATTGGACTAAGCACTGGAGTCGTCATTCTGCTCATTAGTGGGGGGAAAAATTCACATTTACTAGTCTTCAGTGAAGATCTCTTTTTTATATATCTCCTGCCACCTATTATATTCAATGCCGGGTTCCAGGTGAAAAAGAAGCAGTTTTTTAGAAACTTTAGTACAATTATGCTCTTTGGGGCAATTGGTACATTGATCTCTTGTTGCGTCATTTCATTCGGTGTTATACAATTTTTTAAGAAATTGGATATCGGATCACTGGACATTGGAGATTATTTAGCAATTGGTGCAATTTTTATTTTGAATCAGGATGAGACACCTTTACTCTACAGTCTTGTATTTGGAGAAGGTGTGGTAAATGATGCTACATCAGTGGTGCTATTCAATGCAATCCAGAGCTTTGATCTCTCCCATATTGATTCCCGGATTGCATTACAATTTATTGGCAGCTTCTTTTACTTATTTTTTACAAGCACTGTACTGGGTGTGATGACCGGTTTGCTCAGTGCTTTCATTATCAAAAAGCTATATTTTGGCAGGCATTCTACAGACCGCGAGGTTGCTTTAATGATATTAATGGCATACCTTTCATATATGATGGCTGAATTGTTCTATTTAAGTGGCATTCTCACGGTGTTCTTTTGTGGGATCGTGATGTCACATTACACCTGGCACAATGTCACTGAAAGTTCACGAGTTACCACAAAGCATGCTTTTGCTACATTGTCATTTGTAGCTGAGATCTTTATCTTCCTTTACGTTGGCATGGACGCATTGGACATTGAAAAGTGGAGATTTGTCGGCCACAGTCCTGGGACTTCTTTGGCAGTAAGTTCCATACTTTTAGCTCTGGTTATGGCTGGAAGAGCTGCTTTTGTTTTTCCATTATCATTTTTGTCCAACTTAGCAAAAAAATCACCCGCTGAGAAAATTAGCTTCAGGCAGCAAGTGATAATATGGTGGGCTGGTCTGATGAGAGGTGCCGTCTCAATGGCTCTTGCTTATAATCAGTTCACAAGATCAGGACACACTCAATTGCGTGGGAATGCAATCATGATCACAAGCACTATAACAGTCGTTCTCTTCAGCACAGTGTTGTTTGGGTTAATGACCAAGCCTCTCATTAGGTTCTTGTTGCCTAATCCGAAACCCACATCGAGCATGGTTTTGTCCGATCCATCCACTCCCAAATCATTTATCATTCCGCTTCTCGGAGGCAGTCAAGACTCTGAAGTCGATACCGGGGCCCAAGAAATTCCCCGTCCGAGCAGTATTCGAGCCCTTCTAACCACTCCAACACACAATGTTCATAGGTACTGGCGTAAATTTGACGATGCATTTATGCGGCCGGTGTTTGGCGGACGGGGTTTTGTTCCTTATGTGCCTGGATCGCCAACAGAGAGGAGTCCCAACCAATGGCGGTGA | 1596 | 42.04 | MSPMLSYVLSRVQTLSTSDHSSIVSMNLFVALLCGCIVIGHLLEENRWMNESITALLIGLSTGVVILLISGGKNSHLLVFSEDLFFIYLLPPIIFNAGFQVKKKQFFRNFSTIMLFGAIGTLISCCVISFGVIQFFKKLDIGSLDIGDYLAIGAIFILNQDETPLLYSLVFGEGVVNDATSVVLFNAIQSFDLSHIDSRIALQFIGSFFYLFFTSTVLGVMTGLLSAFIIKKLYFGRHSTDREVALMILMAYLSYMMAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHAFATLSFVAEIFIFLYVGMDALDIEKWRFVGHSPGTSLAVSSILLALVMAGRAAFVFPLSFLSNLAKKSPAEKISFRQQVIIWWAGLMRGAVSMALAYNQFTRSGHTQLRGNAIMITSTITVVLFSTVLFGLMTKPLIRFLLPNPKPTSSMVLSDPSTPKSFIIPLLGGSQDSEVDTGAQEIPRPSSIRALLTTPTHNVHRYWRKFDDAFMRPVFGGRGFVPYVPGSPTERSPNQWR | 531 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 53095137 | 53100142 | - | Bda003982.1 | Bda01g01709 | 1709 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda01g01709 | 531 | Pfam | Sodium/hydrogen exchanger family | 28 | 432 | IPR006153 | GO:0006812|GO:0015299|GO:0016021|GO:0055085 | |
Bda01g01709 | 531 | Gene3D | - | 132 | 187 | - | - | |
Bda01g01709 | 531 | PRINTS | Na+/H+ exchanger signature | 113 | 121 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 | |
Bda01g01709 | 531 | PRINTS | Na+/H+ exchanger signature | 98 | 112 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 | |
Bda01g01709 | 531 | PRINTS | Na+/H+ exchanger signature | 84 | 95 | IPR004709 | GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085 | |
Bda01g01709 | 531 | PANTHER | SODIUM/HYDROGEN EXCHANGER 2 | 7 | 530 | - | - | |
Bda01g01709 | 531 | PANTHER | SODIUM/HYDROGEN EXCHANGER | 7 | 530 | IPR018422 | GO:0006812|GO:0015299|GO:0016021 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda01g01693 | Bda-Chr1:52986801 | Bda01g01709 | Bda-Chr1:53095137 | 0 | dispersed | |
Bda01g01709 | Bda-Chr1:53095137 | Bda08g00277 | Bda-Chr8:2892266 | 0 | dispersed | |
Bda13g00908 | Bda-Chr13:10822746 | Bda01g01709 | Bda-Chr1:53095137 | 2.04E-11 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda01g01709 | - | - | zju:107412105 | 892.108 |