Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g01717 ATGTTGTTTCCCTCTTCTTCTACTTCTTCTTCCCTCCTCACTTGTTTTCTCTCACTGCTACTCCTTTCTCTCTCATCAAAAACAATTGCAGCCGCGGGAAACACCTCGCGCCGCCATGGCCAACTCTCTATCAACTACTACAACAAAACGTGCCCTCAAGTTGACCAACTCGTGGCCTCCATTACAACCGAGCTGTTCAAAGAAGCTCCAGTGTCTGGCCCTGCAACTCTTCGTCTCTTCTTCCATGATTGCTTTGTCGAAGGTTGTGATGGATCGATTCTGATATCGTCGAATCCAGCCAAAAAAGTGTTGGCTGAGAAGGACGCGGAGGATAATAAGGATTTGAGGGAAGAGGGCTTCGAGGTTGTGAAGAAGGCAAAGGCTATGGTTGAAAGCAAGTGCCCTGGTGTTGTGTCTTGCGCAGACATTCTTGCAATTGCAGCCAGAGATTATGTCCACTTGGCAGGAGGACCTTATTACGAGGTGAAGAAAGGAAGGTGGGATGGTAAATTATCAATGGCAACAAGAGTAACCTCCAACCTCCCTCGAGCGAATTCGACAGTTGATTTTCTGCTCAAACTCTTCCTCTCCAAAGGCCTAACCGCATCTGACCTAGTCGTCCTCTCTGGTGCACACACCATCGGTTTTGCCCACTGTGACCACTTCATCCCTCGTTTATATGATTACCAAGGTACAAAGCAACCAGATCCAACCGTTGACTCAAGGCTCTTGAAGGCTCTCAAAATGTCATGTCCTTTTTCTGGTGGAAACACAGATATTGTTGTTCCGTTTGATGTTACCACACCATTTTTGTTCGACCATGCTTATTACGCTAATTTGGAAGTAAAATTAGGGTTGCTGGCAACTGATCAGGCTTTGTTTATGGATGTAAGGACCAAGCCTATTGTTGAAGCTATGGCTAAGGATAAGCAGAAGTTTTTCCAAGCTTTTATTGTGGCTATGGAGAAGATGGGATCCATTGGAGTGAAGAGAGGAAGAAGACATGGAGAGAGAAGGATAGATTGTAGCATTCACAAAGAATAA 1044 45.5 MLFPSSSTSSSLLTCFLSLLLLSLSSKTIAAAGNTSRRHGQLSINYYNKTCPQVDQLVASITTELFKEAPVSGPATLRLFFHDCFVEGCDGSILISSNPAKKVLAEKDAEDNKDLREEGFEVVKKAKAMVESKCPGVVSCADILAIAARDYVHLAGGPYYEVKKGRWDGKLSMATRVTSNLPRANSTVDFLLKLFLSKGLTASDLVVLSGAHTIGFAHCDHFIPRLYDYQGTKQPDPTVDSRLLKALKMSCPFSGGNTDIVVPFDVTTPFLFDHAYYANLEVKLGLLATDQALFMDVRTKPIVEAMAKDKQKFFQAFIVAMEKMGSIGVKRGRRHGERRIDCSIHKE 347
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 53256820 53258775 - Bda003991.1 Bda01g01717 1717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g01717 347 CDD secretory_peroxidase 41 343 IPR033905 GO:0004601|GO:0042744
Bda01g01717 347 ProSitePatterns Peroxidases proximal heme-ligand signature. 204 214 IPR019793 -
Bda01g01717 347 PANTHER PEROXIDASE 19 32 342 - -
Bda01g01717 347 ProSiteProfiles Plant heme peroxidase family profile. 41 346 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bda01g01717 347 SUPERFAMILY Heme-dependent peroxidases 41 344 IPR010255 GO:0004601|GO:0006979|GO:0020037
Bda01g01717 347 Gene3D Peroxidase, domain 2 182 324 - -
Bda01g01717 347 PANTHER PEROXIDASE 25-RELATED 32 342 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bda01g01717 347 PRINTS Haem peroxidase superfamily signature 204 219 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bda01g01717 347 PRINTS Haem peroxidase superfamily signature 73 87 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bda01g01717 347 PRINTS Haem peroxidase superfamily signature 265 280 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bda01g01717 347 PRINTS Haem peroxidase superfamily signature 138 155 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bda01g01717 347 PRINTS Haem peroxidase superfamily signature 156 168 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bda01g01717 347 ProSitePatterns Peroxidases active site signature. 73 84 IPR019794 GO:0004601
Bda01g01717 347 PRINTS Plant peroxidase signature 137 147 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bda01g01717 347 PRINTS Plant peroxidase signature 51 70 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bda01g01717 347 PRINTS Plant peroxidase signature 156 171 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bda01g01717 347 PRINTS Plant peroxidase signature 203 215 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bda01g01717 347 PRINTS Plant peroxidase signature 118 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bda01g01717 347 PRINTS Plant peroxidase signature 279 296 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bda01g01717 347 PRINTS Plant peroxidase signature 319 332 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bda01g01717 347 PRINTS Plant peroxidase signature 263 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bda01g01717 347 PRINTS Plant peroxidase signature 75 95 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bda01g01717 347 Pfam Peroxidase 61 309 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bda01g01717 347 Gene3D - 45 343 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01717 Bda-Chr1:53256820 Bda06g01111 Bda-Chr6:39476813 2.71E-92 dispersed
Bda01g00702 Bda-Chr1:34309219 Bda01g01717 Bda-Chr1:53256820 2.10E-86 transposed
Bda13g01662 Bda-Chr13:40069237 Bda01g01717 Bda-Chr1:53256820 7.94E-56 transposed
Bda04g00009 Bda-Chr4:102350 Bda01g01717 Bda-Chr1:53256820 6.29E-88 transposed
Bda01g01717 Bda-Chr1:53256820 Bda07g00989 Bda-Chr7:11708940 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g01717 K00430 - csv:101216263 513.072