Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g01720 ATGGATGGAGAATCTAATTCTTGGTTAAGGAGGACGAACTTTTCGCACACAGTATGTCATCGACTGGACTCTTCGAGATTAGTGACAGCCCCTTTCACCATTCAATCAGAACGAAATTCCGGCTTGAAATCAAGGCCTGCTATTTCAAGTCTGCAGCAAAATCCAATCACAAACAAGCAGAGGTCTGTTTCCCCTCTTCCCGAAATAACCCTTTCTGATACATTCAGAGATGCGAGGTCTGACCAAAAGCGATTCTCTACTCCTTGTCCTCGCCAGAAAGAACACGAAAAGGGGATTAAGGGAAAGATTTCGAGCAAGGATAGGCAGAATTCTAGTCCTTTAAGGCACTTGGCTTCCATTAAAGCTATAGGGAAATCAAAATTTCGAAAGGATTCGTCGTGGACGAAGTACTTTGATCATGGAGGAGGAAAAGTTACTTCTGTTGAAGCAGCTGATGAATGGTCTGTGGATTTATCGAAATTGTTCATTGGCCTAAGATTTGCTCATGGAGCTCATAGTAGGCTTTACCATGGGATGTATAACGAAGAATCCGTTGCAATAAAGATTATTCGGATACCAGATGATGACGAAAATGGAGAACTTGCAGGCCGATTGGAGAAGCAATTCAGCCAGGAAGTCTCTCTTTTATCCCGGCTGCACCATCCAAATGTCATCAAATTCGTAGCAGCCTGTAGAAAACCGCCAGTTTATTGCGTCATTACAGGATATCTATCGGGTGGTTCCCTCCGAGCGTATTTGCACAAGCTTGAGCACAAATCGCTTTCTTTAAAAAAATTGATAGCAATTGCTTTGGATATCGGCCGAGGAATGGAGTACATTCATGCGCAAGACATTATTCATCGAGACCTCAAGCCTGAAAATATTCTGATCGATCAAGATTTCCGAATGATTATCGCTGATTTCGGCATTGCTTGCAAAGAGGTGTATTGCGATTCTTTAGCGAATGACCCCGGAACGTATCGATGGATGGCCCCTGAAATGATCAAGCACAAATCTTACAGCCGAAAGGTTGATGTTTATAGCTTTGGGCTCATCTTGTGGGAAATGGTGGCTGGAACTATTCCGTACGAAGATATGAATCCAATCCAAGCTGCATTTGCTGTTGTGAATAAGAATCTGAGACCTGTAATTCCATCTGACTGTCCACATGCTCTAGGGGCCTTGATCGAACAATGTTGGTCGCTACAGCCGGAAAAGAGGCCAGAGTTTTGGCAGGTGGTGAAGGTGTTGGAGCAGTTTGAGTCCTCACTAGCCATTGATGGAACACTAAAGCTTGCACAAAACCCTGCTTGTCAAGATCAAAAGAAAGGCCTCCGCCATTGGATGCATAAGCTTGGCCCTGTTCATTCTCATAGTTTGCCGAAACCTAAATTCAATTAG 1401 43.83 MDGESNSWLRRTNFSHTVCHRLDSSRLVTAPFTIQSERNSGLKSRPAISSLQQNPITNKQRSVSPLPEITLSDTFRDARSDQKRFSTPCPRQKEHEKGIKGKISSKDRQNSSPLRHLASIKAIGKSKFRKDSSWTKYFDHGGGKVTSVEAADEWSVDLSKLFIGLRFAHGAHSRLYHGMYNEESVAIKIIRIPDDDENGELAGRLEKQFSQEVSLLSRLHHPNVIKFVAACRKPPVYCVITGYLSGGSLRAYLHKLEHKSLSLKKLIAIALDIGRGMEYIHAQDIIHRDLKPENILIDQDFRMIIADFGIACKEVYCDSLANDPGTYRWMAPEMIKHKSYSRKVDVYSFGLILWEMVAGTIPYEDMNPIQAAFAVVNKNLRPVIPSDCPHALGALIEQCWSLQPEKRPEFWQVVKVLEQFESSLAIDGTLKLAQNPACQDQKKGLRHWMHKLGPVHSHSLPKPKFN 466
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 53277260 53279442 + Bda003995.1 Bda01g01720 1720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g01720 466 MobiDBLite consensus disorder prediction 77 111 - -
Bda01g01720 466 PRINTS Tyrosine kinase catalytic domain signature 279 297 IPR001245 GO:0004672|GO:0006468
Bda01g01720 466 PRINTS Tyrosine kinase catalytic domain signature 388 410 IPR001245 GO:0004672|GO:0006468
Bda01g01720 466 PRINTS Tyrosine kinase catalytic domain signature 241 254 IPR001245 GO:0004672|GO:0006468
Bda01g01720 466 PRINTS Tyrosine kinase catalytic domain signature 325 335 IPR001245 GO:0004672|GO:0006468
Bda01g01720 466 PRINTS Tyrosine kinase catalytic domain signature 344 366 IPR001245 GO:0004672|GO:0006468
Bda01g01720 466 SUPERFAMILY Protein kinase-like (PK-like) 147 417 IPR011009 -
Bda01g01720 466 MobiDBLite consensus disorder prediction 77 104 - -
Bda01g01720 466 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 4 443 - -
Bda01g01720 466 Pfam Protein tyrosine and serine/threonine kinase 167 417 IPR001245 GO:0004672|GO:0006468
Bda01g01720 466 SMART serkin_6 161 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g01720 466 ProSitePatterns Serine/Threonine protein kinases active-site signature. 285 297 IPR008271 GO:0004672|GO:0006468
Bda01g01720 466 Gene3D Transferase(Phosphotransferase) domain 1 245 451 - -
Bda01g01720 466 ProSiteProfiles Protein kinase domain profile. 161 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g01720 466 Gene3D Phosphorylase Kinase; domain 1 149 244 - -
Bda01g01720 466 PANTHER TYROSINE KINASE FAMILY PROTEIN 4 443 - -
Bda01g01720 466 CDD STKc_MAP3K-like 168 417 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01720 Bda-Chr1:53277260 Bda09g01013 Bda-Chr9:40133049 1.84E-100 dispersed
Bda09g01253 Bda-Chr9:43954460 Bda01g01720 Bda-Chr1:53277260 0 transposed
Bda14g00817 Bda-Chr14:6283031 Bda01g01720 Bda-Chr1:53277260 3.16E-114 transposed
Bda01g01720 Bda-Chr1:53277260 Bda07g00991 Bda-Chr7:11731010 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69459 PF07714 PK_Tyr_Ser-Thr 2.40E-60 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g01720 - - jre:109014417 734.561