Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g01721 ATGGCGAATCCACGCTTCTTCACTCTTCTCCCTCTTTTTCTTCTTTTTCAACCCATTTTCTCTGTTGATTTTCTCTTCAACGGCTTCAATTCTTCCGATCTCTGGCTTTACGGCAACTCCACCATTGATTCCCGTATTTTGACACTCACCAATAAAACCAGCTTTTCCATCGGCCGGGCTCTGTTTCCTGGGAAGATTCGGGTCAAGGAACCTAACTCGTCATATGTCCTCCCCTTTTCCACTTCTTTTATCTTCGCAATGGCGCCTTACAAGAATACTCTTCCTGGCCATGGCATGGTTTTCATTTTTGTTCCTTCTACCGGAATAAACGGCACTAGCTCTGCTCAAAACTTAGGTCTGTTTAACTTCACGAACAACGGAAGTCCGGACAATCACGTGCTTGGAGTGGAATTCGATGTGTTTTCCAATCAGGAATTCAGTGATATAAACGCTAACCACGTTGGAATCGATGTGAATTCTCTCACATCAGTTGCCGCCAATAATTCTGGCTACTGGCCTGACGATTCTTCCAGTTTCGAAGAATTGAAGCTAAACAGCGGTGAAAATTACCAGGTTTGGATCGATTATTCCGATTCTGTAATTAATGTAACCATAGCTCCAGCAGGTGTTAGACGGCCGAGTCGGCCATTGATGAATGTTACACTGAATCTCTCTGAAGTACTTCTGGATGAAATGTATGTTGGCTTTACTGCTTCAACTGGACAGCTAGTTGAAAGCCATAAGGTCTTAGCTTGGAGTTTCAGTAACTCAAATTTTTCTCTAAGCGAGAGTTTGATCACTACTGGTTTACCTTCATTCGTTCTTCCGGACGAACCAATTTATAAATCCAAATGGTTTATCATAGGAGTTGCAGTGGGAGGTTTTCTTCTTCTTTGCTCTTGCGCTTTAGTTTCTTATTTTATGATCGCAAGGTGTTTGCGAAATGCCAAAGAGAGAAGGGAGATGGAAGAATGGGAGTTGGAGTATTGGCCTCACCGGATTTCATATCACGAAATCGAGAAATCAACCAAGGGATTCAAAGAAGAGAATGTAATTGGCATTGGAGGGAATGGGAAAGTTTTCAAGGGAGTTCTATCGGGAGGAACGAAGATCGCCGTGAAGCGCAATTCACCTGGCCACGACGGCATGAGAGAATTCGTAGCTGAAATTTCAAGCATTGGAAGATTGAAGCACAGAAATTTGGTGGGTTTGAAAGGATGGTGTAAAAAAGAGAAAGGAACCTTCTTGCTGGTCTATGATTATATGGAGAATGGAAGCTTAGACAAAAAAATATTCGAAGCCGAAAATAACAAGATGCTAAGCTGTGAAGAAAGGATAAGAATTCTCAAAGAAGTAGCTTCTGGGGTGTTGTATTTACATGAAGGGTGGGAGTCCCAGGTTCTACACAGAGACATCAAAGCCAGCAATGTTCTGCTTGACAAAGACATGAGGGGACGGCTCGGAGATTTTGGGCTAGCACGAGTCCACGGCCATAGCCAAGTGACTAGCACGACGAAGGTTGTGGGCACAGTCGGGTACTTAGCCCCTGAAGTGATCAAAAGTGGGCGAGCCTCAACTCAAACAGATGTATTTGGGTTTGGAGTATTGATTTTAGAAGTAATGTGTGGGAGGAGGCCAATAGAGGAAGGGAAGCCTTCTTTGATACAATGGGTATGGGAAATGATGGAAAAGAACCAATTATGCAATGCTTTGGATGAAAAACTGAGGAACTTTTCGGGAAAATTCGACAAGGAAGAGGTCGAGAAGGTGCTTCATTTAGGCTTGCTTTGTGCATATCCCGACCCGAGTGCTCGGCCCACAATGAGACAAGTCGTGAAGATATTGGAGGGAAAAAGCGACTCGAACGAGCCAGAAACGGAAGCCATGGATGCATATTTGCTCGATCGGATGCAATCGAAGGGCATTTGGGATCAGTTTTCGCAGGCCTTCGGCTATACATCATCACACCCAACATTTGATGACTTCAAACAAGAAAACTCCTCAATGTCTCTCACTTGGTCCAACTCTGATATCTATGGCAGGTAA 2046 43.94 MANPRFFTLLPLFLLFQPIFSVDFLFNGFNSSDLWLYGNSTIDSRILTLTNKTSFSIGRALFPGKIRVKEPNSSYVLPFSTSFIFAMAPYKNTLPGHGMVFIFVPSTGINGTSSAQNLGLFNFTNNGSPDNHVLGVEFDVFSNQEFSDINANHVGIDVNSLTSVAANNSGYWPDDSSSFEELKLNSGENYQVWIDYSDSVINVTIAPAGVRRPSRPLMNVTLNLSEVLLDEMYVGFTASTGQLVESHKVLAWSFSNSNFSLSESLITTGLPSFVLPDEPIYKSKWFIIGVAVGGFLLLCSCALVSYFMIARCLRNAKERREMEEWELEYWPHRISYHEIEKSTKGFKEENVIGIGGNGKVFKGVLSGGTKIAVKRNSPGHDGMREFVAEISSIGRLKHRNLVGLKGWCKKEKGTFLLVYDYMENGSLDKKIFEAENNKMLSCEERIRILKEVASGVLYLHEGWESQVLHRDIKASNVLLDKDMRGRLGDFGLARVHGHSQVTSTTKVVGTVGYLAPEVIKSGRASTQTDVFGFGVLILEVMCGRRPIEEGKPSLIQWVWEMMEKNQLCNALDEKLRNFSGKFDKEEVEKVLHLGLLCAYPDPSARPTMRQVVKILEGKSDSNEPETEAMDAYLLDRMQSKGIWDQFSQAFGYTSSHPTFDDFKQENSSMSLTWSNSDIYGR 681
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 53279924 53281969 - Bda003996.1 Bda01g01721 1721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g01721 681 ProSitePatterns Protein kinases ATP-binding region signature. 352 374 IPR017441 GO:0005524
Bda01g01721 681 SMART serkin_6 346 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g01721 681 Gene3D - 20 264 - -
Bda01g01721 681 PANTHER - 8 674 - -
Bda01g01721 681 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VII.1 8 674 - -
Bda01g01721 681 Gene3D Phosphorylase Kinase; domain 1 308 421 - -
Bda01g01721 681 Pfam Protein kinase domain 346 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g01721 681 CDD STKc_IRAK 352 617 - -
Bda01g01721 681 ProSiteProfiles Protein kinase domain profile. 346 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g01721 681 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672|GO:0006468
Bda01g01721 681 Pfam Legume lectin domain 22 259 IPR001220 GO:0030246
Bda01g01721 681 Gene3D Transferase(Phosphotransferase) domain 1 422 638 - -
Bda01g01721 681 SUPERFAMILY Concanavalin A-like lectins/glucanases 20 261 IPR013320 -
Bda01g01721 681 CDD lectin_legume_LecRK_Arcelin_ConA 22 252 IPR001220 GO:0030246
Bda01g01721 681 SUPERFAMILY Protein kinase-like (PK-like) 323 616 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01721 Bda-Chr1:53279924 Bda06g00616 Bda-Chr6:8441060 2.17E-147 dispersed
Bda03g00807 Bda-Chr3:6840714 Bda01g01721 Bda-Chr1:53279924 2.43E-12 dispersed
Bda01g01721 Bda-Chr1:53279924 Bda07g00992 Bda-Chr7:11733810 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69460 PF00069 Pkinase 2.00E-46 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g01721 - - mesc:110605502 972.615