Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g01745 TTGAAGAAAAAGAGTGAAGCATTATCAAAATTCATTGAGTTCAATAAAGCTGTAGAAAATGAGTTTGGGCAGGAAGTTAAATGTTTGAGAAGCGATAATGGTGGAGAATTCATGTCAGATGATTTTTCTCAGTATTGCAATAACAAGAGTATTCAGCGACAAATGACATGCCCAAACACCCCTCAGCAAAATGGGGTTGCTGAAAGAAAGTTGGCACATCTCACATCAATCTGTCTCTCATGGCTACATGAAAAAAATCTTCCTAGAAAACTTTGGGCAGAAGCATTTCAGTGTGCATGTCATATAATAAACAGGCTACCTTCTTGGCCAGGTAAAGAACAAACTCCATTTGAGATTATGCATAATGTAAAACCAAATGTTAATTACTTTCGAGTATTTGGTTCTACTTGTTATTTTCATGTTTCAAAAACTAACCGGACCAAACTGGATCCAAAAGCAAAGAAATGCATTTTTGTTGGTTATGATTCATGTAGGAAAGGATGGAGATGCATGGATCCAACAACAGAGAAATTTATTGTGTCAAGAGATGTAGTATTTGATGAAGTATCATCATGGTATTCTGCTCAAAAATCAATTGTTCAAAATGCAGACTCTACTCCAAGTGAAGATTATATGGAGTTGTTTTTTAAGGTTGACACTCAAATACCTCATGATGGGGAGCCTGCGCAACAAACTAGTGATGAGTCTATCACCTCTTCAAGTTTCAATAATCATGAGCAAGAAACAAGAACATCAACGAGAGAGAAAAGACAACCAGATTATCTTAAAGATTATGTGCAACTGAATATTTGTACCGTGACAGCATGTTTGTTTACTGGAGCATTAATAGAAGAACCAGCTAGTTATGAAGAAGCAATGGGTTGTTCAGAATGGGAAGCAGCTATGCTAGAAGAAATTGAAGCATTAAAGAAAAATGAAACTTGGGAACTTGTGCCTAAGCCAGAAAATTGTTTAAACCACCCAAACCACCGTAAAAATGTGGATATTCGATTCTGCGAAGCTGAATGTTACAGGATCGATGCAGAAAACAAGAAAATCTTTTGTAGATCTAATCAAACAAACAATCTGAACGGGAAAAAAGAATTTGTAATGGACTACGACTTCCTCGTAATATCTGTCGGAGCACAGGTTAATACGTTCAACACTCCTGGTGTGGTGGAGAATTGTCATTTCTTGAAGGAAGTGGAAGATGCTCAAAGAATTCGAAGGACTGTGATCGACTGTTTTGAGAGGGCGAGTTTACCGACATTAGCAGATGATGAACGAGCAAGAATTCTTCACTTTGCTGTTGTTGGTGGTGGCCCCACTGGTGTAGAATTTGCCGCGGAGCTTCATGATTTTGTCAACGAGGATTTAACAAAATTATATCCTGGAGTTAAAGAACTAGTAAAGATAACTCTTCTTGAGGCCGGAGATCATATTTTGAACATGTTTGACAAAAGAATTACAGCTTTTGCTGAAGAAAAATTTCAAAGAGATGGTATCGATGTCAGGACAGGATCAATGGTTGTCAAAGTAACTGATAAAGAAATTTCTACTAAAGAAATGAAAAGTGGAGAGATTTCTTCTATACCTTATGGAATGGTTGTATGGTCAACTGGGATTGGGACTCGCCCCTTCATCAAAGACTTTATGGCACACATTGGTCAGACTAACCGGCGTGCTTTGGCTACTGATGAATGGCTGCGAGTCGAAGGATGCAGTAACGTGTATGCACTTGGTGACTGTGCCACAATAAACCAGCGTAAAGTCATGGAGGATATTTCTTCGATCTTTGGCAAAGCGGACAAGGACAATTCGGGAACACTTACAGTCAAAGAATTTCAAGAAGTCATCGATGATGTGTGTGAGAGGTATCCTCAGGTGGAGCTTTATTTAAAGAATAAGCAGATGGGAAACATAGTTGATCTTTTGAAGGAGTCCAAAGGGAATGTTGCGAAGGAATCCATTGAATTGAACATTGAAGAATTTAAATCAACTCTTTCCCAGGTGGATTCACAAATGAAGAATCTTCCGGCAACCGCACAGGTTGCAGCTCAGCAAGGTGTTTATCTTGCTAAATGTTTTAACCGTATGGAAGAGTGTGAAAAGTATCCAGAGGGTCCTCTCAGATTCAGGGAATCAGGCCGCCATCGATTTCATCCCTTTCGGTATAAGCATCTGGGACAGTTTGCGCCATTGGGTGGAGAGCAAACAGCTGCTCAACTTCCGGGAGATTGGGTGTCCATTGGCCATAGCAGCCAGTGGCTTTGGTATTCTGTTTATGCAAGCAAGCAAGTCAGTTGGAGGACGAGGGCATTGGTGGTATCAGATTGGGGAAGGCGTTTTATCTTTGGAAGAGATTCTAGTCGCATCTGA 2379 39.81 LKKKSEALSKFIEFNKAVENEFGQEVKCLRSDNGGEFMSDDFSQYCNNKSIQRQMTCPNTPQQNGVAERKLAHLTSICLSWLHEKNLPRKLWAEAFQCACHIINRLPSWPGKEQTPFEIMHNVKPNVNYFRVFGSTCYFHVSKTNRTKLDPKAKKCIFVGYDSCRKGWRCMDPTTEKFIVSRDVVFDEVSSWYSAQKSIVQNADSTPSEDYMELFFKVDTQIPHDGEPAQQTSDESITSSSFNNHEQETRTSTREKRQPDYLKDYVQLNICTVTACLFTGALIEEPASYEEAMGCSEWEAAMLEEIEALKKNETWELVPKPENCLNHPNHRKNVDIRFCEAECYRIDAENKKIFCRSNQTNNLNGKKEFVMDYDFLVISVGAQVNTFNTPGVVENCHFLKEVEDAQRIRRTVIDCFERASLPTLADDERARILHFAVVGGGPTGVEFAAELHDFVNEDLTKLYPGVKELVKITLLEAGDHILNMFDKRITAFAEEKFQRDGIDVRTGSMVVKVTDKEISTKEMKSGEISSIPYGMVVWSTGIGTRPFIKDFMAHIGQTNRRALATDEWLRVEGCSNVYALGDCATINQRKVMEDISSIFGKADKDNSGTLTVKEFQEVIDDVCERYPQVELYLKNKQMGNIVDLLKESKGNVAKESIELNIEEFKSTLSQVDSQMKNLPATAQVAAQQGVYLAKCFNRMEECEKYPEGPLRFRESGRHRFHPFRYKHLGQFAPLGGEQTAAQLPGDWVSIGHSSQWLWYSVYASKQVSWRTRALVVSDWGRRFIFGRDSSRI 792
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 53567481 53582057 + Bda004027.1 Bda01g01745 1745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g01745 792 ProSiteProfiles Integrase catalytic domain profile. 1 124 IPR001584 GO:0015074
Bda01g01745 792 MobiDBLite consensus disorder prediction 225 256 - -
Bda01g01745 792 SUPERFAMILY EF-hand 548 678 IPR011992 -
Bda01g01745 792 ProSiteProfiles EF-hand calcium-binding domain profile. 590 625 IPR002048 GO:0005509
Bda01g01745 792 SUPERFAMILY FAD/NAD(P)-binding domain 434 587 IPR036188 -
Bda01g01745 792 PANTHER NADH DEHYDROGENASE 330 792 IPR045024 GO:0003954|GO:0006116
Bda01g01745 792 SUPERFAMILY FAD/NAD(P)-binding domain 329 486 IPR036188 -
Bda01g01745 792 ProSitePatterns EF-hand calcium-binding domain. 603 615 IPR018247 -
Bda01g01745 792 Gene3D - 634 791 - -
Bda01g01745 792 Gene3D - 320 610 - -
Bda01g01745 792 Gene3D - 1 129 IPR036397 GO:0003676
Bda01g01745 792 Pfam Pyridine nucleotide-disulphide oxidoreductase 313 592 IPR023753 GO:0016491
Bda01g01745 792 MobiDBLite consensus disorder prediction 225 247 - -
Bda01g01745 792 SUPERFAMILY Ribonuclease H-like 4 133 IPR012337 -
Bda01g01745 792 PANTHER NAD(P)H DEHYDROGENASE B2 330 792 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01745 Bda-Chr1:53567481 Bda01g01793 Bda-Chr1:54132079 0 dispersed
Bda11g01606 Bda-Chr11:49679785 Bda01g01745 Bda-Chr1:53567481 3.28E-07 dispersed
Bda01g01745 Bda-Chr1:53567481 Bda13g00644 Bda-Chr13:7416844 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g01745 K03885 - csv:101204145 850.506