Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g01769 GTGAACAATATAATAAAAGTCGATAACAACACAAACGATGCAGTCATCTGCTACGCGCCGACGATGATAACCACAAACGGCATTTGGCAAGGCGACAACCCTTTGGATTACTCCCTTCCTCTCTTCGTTTTGCAATTATCACTCGTCGTCATTCTCACTCGCGTCCTCGTTTTCCTTCTCAAACCATTCCGCCAACCTCGCGTCGTCTCTGAAATCTTGGCTGGAATAATTTTGGGTCCTTCAGTTCTTGGACAGAGTACCACATTTGCCGACTCCATGTTTCCTCTGAGAAGTGTAATGGTGCTTGAAACAATGGCAAATGTGGGTCTTCTCTATTTTCTCTTCTTAGTCGGAGTGGAGATGGACCTGGCTGTCATTCGTCGAACTGGCCGGAAAGCCATGGCCATAGGCGCCGCGGGAATGGTTCTTCCCTTCATGATAGGAGCCTGCTTCTCCGTCGTCTTCCATAAAACAGATTACTCGATGAGCACAGGCACTTTCATTCTCTTCACAGGCGTTTCCCTATCCGTCACTGCATTTCCTGTGCTCGCTAGAGTACTTGCGGAGCTAAAACTCATTAACACCGAGCTCGGAAGGGTTGCAATGGCGTCAGCGCTTTTCAATGACATGTTTGCCTGGATACTTCTGGCCATAGCTATTGCTCTTACGGAAAATCAAGAGACTTCTTTAGCTTCAATTTGGATCATTTTATCGAGTCTCGGCTTTGTTACCTTCGCCATCTTGGCCGTTCGCCCCGCCATTGGGTGGATAATTAGACGGACGCCGGAGGGTGAACCGTTCAGTGACTTTCATATCTGTCTCGTTCTCACCGGCGTAATGATCTCAGGGTTTATTACGGACGCCATCGGAACCCATTCCATTTTTGGAGCTTTTGTGTTTGGTCTTGTTATTCCAAATGGATCACTTGGGATTACTTTGATAGAGAAGCTTGAGGATTTTGTTTCAGGGCTTCTACTTCCTCTCTTTTTCGCCATTAGTGGGCTAAAGACAGATATTTCCACCATTAAAGGACCTCAAACTTGGGGGATCCTACTTCTTCTCATTTTTTCTGCTGGTGCTGGTAAAGTTGCAGGCACTCTCGTGGCTTCCCTTTTTTATCACATGCCTTGTAACGAAGGAATCTCTCTGGGTCTGCTCATGAACACCAAAGGCCTCATTGAGATGATCATCCTTAATGTCGGAAAAGACCACAAGGTGTTAGACAATAGGTCATTTGCAATAATGGTGATAGTGTCGCTGATAATGACTGCGCTAATAACCCCAATAGTGACTGTAATTTACAAGCCAGCAAGGAGGTTTACGCCCTACAAAAAGAGGACGATTGAGAGATCCAAACCAGATTCTGAGCTAAGGGTTTTGGTTTGTGTTCATACTCCCAGAAACGTTCCGACAATCATTAATCTTCTCGAAGCGTCAAACCCAACAAAACGATCCCCCATTTGCATCTACGTCCTCCACCTGGTCGAGCTCACCGGACGTGCCTCCGCCATGCTCATCGTTCACAGCACCCACACGTCGGGCCGCACCTCCCACAACTCCCAGGCGCAGTCGGACCACATCATCAACGCCTTCGAGAACTACGAGCAGCATGCTGGCTGCGTTTCAGTGCAGCCACTCACTGCCATTTCTCCCTACTCCACCATGCACGAAGACATCTGCAGCTTGGCCGAAGACAAGAGAGTCGCGTTCGTTATAATCCCGTTTCACAAGCAGCAGACGGTGGATGGAGGAATGGAGGCAGCTAACCCAGCTTTTCGAACGGTGAACCAGAATCTGCTGGCCAACGCACCTTGCTCCGTGGGGATTTTGGTGGACCGAGGGTTGAGTGGTTCGACTAGATTGGCTCCCACGCAGGTCTCTCACAATGTTGCGGTTCTCTTCTTTGGGGGTCACGACGATAGAGAAGCTCTCTCGTACGCATGGCGGATGTCAGAGCATCCCGGAGTTAGCCTCAACGTGATGCGGTTCGTCCCCGGAAAAGACTCACATTCTGTCTCCAAGCCGAAGGAGATGAAGTCTGATGACCAGAGGCCCCTCCCGGTGGTTACAGGCGTGGAAAGACAAAAACAACTGGACGACGCGCTGTTGAACGAGTTCAGGATTAAAACAGTGGGCAACAAGTCGGTTGTTTATACAGAAAAAGTGGCGAATAATGGAGAAGAAACAGTGGCATCAATAAGATCAATGGGCAACAATCATGATCTGTTCATAGTTGGGAGAGGGCAAGGGACGGTGTCGCCGCTCACTGCAGGGATGACTGACTGGAGCGAGTGCCCGGAGCTGGGGGCCATTGGAGACCTGCTTGCGGCCTCCGATTTTTCATCCACCGCTTCGGTGTTGGTGGTGCAGCAATACGTCGGAGAAGGTCCACACGGGGACGGAGTGGGGACGGTTGATAGCCCTACCGGGCGAGTTGAGGAACACATGACCCACTCATGGCAAATGAACGTGAGGCCTCAGCCACCGGCAAGGCCTCACCCTGTCTTCTCCCAG 2514 50.16 VNNIIKVDNNTNDAVICYAPTMITTNGIWQGDNPLDYSLPLFVLQLSLVVILTRVLVFLLKPFRQPRVVSEILAGIILGPSVLGQSTTFADSMFPLRSVMVLETMANVGLLYFLFLVGVEMDLAVIRRTGRKAMAIGAAGMVLPFMIGACFSVVFHKTDYSMSTGTFILFTGVSLSVTAFPVLARVLAELKLINTELGRVAMASALFNDMFAWILLAIAIALTENQETSLASIWIILSSLGFVTFAILAVRPAIGWIIRRTPEGEPFSDFHICLVLTGVMISGFITDAIGTHSIFGAFVFGLVIPNGSLGITLIEKLEDFVSGLLLPLFFAISGLKTDISTIKGPQTWGILLLLIFSAGAGKVAGTLVASLFYHMPCNEGISLGLLMNTKGLIEMIILNVGKDHKVLDNRSFAIMVIVSLIMTALITPIVTVIYKPARRFTPYKKRTIERSKPDSELRVLVCVHTPRNVPTIINLLEASNPTKRSPICIYVLHLVELTGRASAMLIVHSTHTSGRTSHNSQAQSDHIINAFENYEQHAGCVSVQPLTAISPYSTMHEDICSLAEDKRVAFVIIPFHKQQTVDGGMEAANPAFRTVNQNLLANAPCSVGILVDRGLSGSTRLAPTQVSHNVAVLFFGGHDDREALSYAWRMSEHPGVSLNVMRFVPGKDSHSVSKPKEMKSDDQRPLPVVTGVERQKQLDDALLNEFRIKTVGNKSVVYTEKVANNGEETVASIRSMGNNHDLFIVGRGQGTVSPLTAGMTDWSECPELGAIGDLLAASDFSSTASVLVVQQYVGEGPHGDGVGTVDSPTGRVEEHMTHSWQMNVRPQPPARPHPVFSQ 838
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 53936533 53939285 + Bda032977 Bda01g01769 1769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g01769 838 PANTHER CATION/H(+) ANTIPORTER 15 11 832 - -
Bda01g01769 838 MobiDBLite consensus disorder prediction 817 838 - -
Bda01g01769 838 Pfam Sodium/hydrogen exchanger family 49 430 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Bda01g01769 838 Gene3D - 477 760 - -
Bda01g01769 838 Gene3D - 41 440 IPR038770 -
Bda01g01769 838 PANTHER CATION/H + ANTIPORTER 11 832 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01769 Bda-Chr1:53936533 Bda07g00029 Bda-Chr7:467471 0 dispersed
Bda14g00229 Bda-Chr14:1556031 Bda01g01769 Bda-Chr1:53936533 4.02E-159 dispersed
Bda15g00266 Bda-Chr15:5278675 Bda01g01769 Bda-Chr1:53936533 3.92E-156 dispersed
Bda01g01769 Bda-Chr1:53936533 Bda03g00840 Bda-Chr3:7189169 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g01769 - - pvy:116140351 1219.14