Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g01793 ATGCCTGCTTATACAGCTTACGCCCAATTATCAAGAGCTTTTCGCCGTCATCCTTCGCTGTCAAAGCTGCTCATTGTCTTCACCGTCAGTGGTGGGAGCCTGGTGGCTTATGCTGACGCCAACGCATCCGAAAATGTTAGTAAAGTTTCATCTGGATCAGATGTGGTTAAGAAAAAGAAGGTGATAGTGCTTGGAACTGGTTGGGCCGGAACAAGTTTCTTGAAGAATCTTAACGATCCCTCATATGAAGTTCAAGTGGTATCCCCTCGTAATTACTTTGCATTCACTCCGTTGTTGCCAAGCGTCACATGTGGGACAGTTGAAGCCCGCAGCATTGTGGAACCAATCCGTAAAATGGTCAGGAAGAAAAATGTGGATATTCGATTCTGCGAGGCTGAATGTTACAAGATCGATGCAGAAAACAAGAAAATCTTTTGTAAATCTAATCAAACCAACAATCTGAACGGGAAAAAAGAATTTGTAATGGACTACGACTTCCTCGTAATATCTGTCGGAGCACAGGTTAATACGTTCAACACTCCTGGTGTGGTGGAGAATTGTCATTTCTTGAAGGAAGTGGAAGATGCTCAAAGAATTCGAAGGACTGTTATCGACTGTTTTGAGAGGGCGAGTTTACCGACATTAGCAGATGATGAACGAGCAAGAATTCTTCACTTTGCCGTTGTTGGTGGTGGCCCCACTGGTGTAGAATTTGCCGCGGAGCTTCATGATTTTGTCAACGATGATTTAACAAAATTATATCCTGGAGTTAAAGAACTAGTAAAGATAACTCTTCTTGAGGCCGGAGATCATATTTTGAACATGTTTGACAAAAGAATTACAGCTTTTGCTGAAGAAAAATTTCAAAGAGATGGTATCGATGTCAGAACAGGATCAATGGTTGTCAAAGTAACTGATAAAGAAATTTCTACTAAAGAAATGAAAAATGGAGAGATTTCTTCTATACCTTATGGAATGGTTGTATGGTCAACTGGGATTGGGACTCGCCCCTTCATCAAAGACTTTATGGCACAGATTGGCCAGACTAACCGGCGTGCTTTGGCGACTGATGAATGGCTGCGAGTCGAAGGATGCAGTAATGTGTACGCACTTGGTGACTGTGCCACAATAAACCAGCGTAAAGTCATGGAAGATATTTCTTCGATCTTTGGCAAAGCGGACAAGGACAATTCGGGAACACTTACAGTCAAAGAATTTCAAGAAGTCATCGATGATGTGTGTGAGAGGTATCCTCAGGTGGAGCTTTATTTAAAGAATAAGCAGATGGGAAACATAGTTGATCTTTTGAAGGAGTCCAAAGGGAATGTTGCGAAGGAATCCATTGAATTGAACATTGAAGAGTTTAAATCAACTCTTTCCCAGGTGGATTCACAAATGAAGAATCTTCCTGCAACCGCACAGGTGGCAGCTCAGCAAGGTGTTTATCTTGCTAAATGTTTTAACCGTATGGAAGAGTGTGAAAAGTATCCAGAGGGTCCTCTCAGATTCAGGGAATCAGGCCGCCATCGATTTCATCCCTTTCGGTATAAGCATCTGGGACAGTTTGCGCCATTGGGTGGAGAGCAAACAGCTGCTCAACTTCCGGGAGATTGGGTGTCCATTGGCCATAGCAGCCAGTGGCTTTGGTATTCTGTTTATGCAAGCAAGCAAGTCAGTTGGAGGACGAGGGCATTGGTGGTATCAGATTGGGGAAGGCGTTTTATCTTTGGAAGAGATTCTAGTCGCATCTGA 1752 43.15 MPAYTAYAQLSRAFRRHPSLSKLLIVFTVSGGSLVAYADANASENVSKVSSGSDVVKKKKVIVLGTGWAGTSFLKNLNDPSYEVQVVSPRNYFAFTPLLPSVTCGTVEARSIVEPIRKMVRKKNVDIRFCEAECYKIDAENKKIFCKSNQTNNLNGKKEFVMDYDFLVISVGAQVNTFNTPGVVENCHFLKEVEDAQRIRRTVIDCFERASLPTLADDERARILHFAVVGGGPTGVEFAAELHDFVNDDLTKLYPGVKELVKITLLEAGDHILNMFDKRITAFAEEKFQRDGIDVRTGSMVVKVTDKEISTKEMKNGEISSIPYGMVVWSTGIGTRPFIKDFMAQIGQTNRRALATDEWLRVEGCSNVYALGDCATINQRKVMEDISSIFGKADKDNSGTLTVKEFQEVIDDVCERYPQVELYLKNKQMGNIVDLLKESKGNVAKESIELNIEEFKSTLSQVDSQMKNLPATAQVAAQQGVYLAKCFNRMEECEKYPEGPLRFRESGRHRFHPFRYKHLGQFAPLGGEQTAAQLPGDWVSIGHSSQWLWYSVYASKQVSWRTRALVVSDWGRRFIFGRDSSRI 583
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 54132079 54136398 - Bda004083.1 Bda01g01793 1793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g01793 583 PANTHER NAD(P)H DEHYDROGENASE B2 4 583 - -
Bda01g01793 583 SUPERFAMILY FAD/NAD(P)-binding domain 225 378 IPR036188 -
Bda01g01793 583 PANTHER NADH DEHYDROGENASE 4 583 IPR045024 GO:0003954|GO:0006116
Bda01g01793 583 SUPERFAMILY EF-hand 337 469 IPR011992 -
Bda01g01793 583 Pfam Pyridine nucleotide-disulphide oxidoreductase 59 383 IPR023753 GO:0016491
Bda01g01793 583 SUPERFAMILY FAD/NAD(P)-binding domain 58 277 IPR036188 -
Bda01g01793 583 ProSitePatterns EF-hand calcium-binding domain. 394 406 IPR018247 -
Bda01g01793 583 Gene3D - 425 582 - -
Bda01g01793 583 Gene3D - 51 405 - -
Bda01g01793 583 PRINTS FAD-dependent pyridine nucleotide reductase signature 225 243 - -
Bda01g01793 583 PRINTS FAD-dependent pyridine nucleotide reductase signature 61 80 - -
Bda01g01793 583 PRINTS FAD-dependent pyridine nucleotide reductase signature 164 182 - -
Bda01g01793 583 ProSiteProfiles EF-hand calcium-binding domain profile. 381 416 IPR002048 GO:0005509
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01745 Bda-Chr1:53567481 Bda01g01793 Bda-Chr1:54132079 0 dispersed
Bda01g01793 Bda-Chr1:54132079 Bda02g00861 Bda-Chr2:49054873 4.98E-72 dispersed
Bda14g01163 Bda-Chr14:10805229 Bda01g01793 Bda-Chr1:54132079 8.55E-06 dispersed
Bda01g01793 Bda-Chr1:54132079 Bda13g00644 Bda-Chr13:7416844 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g01793 K03885 - csv:101204145 1020.38