Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g01795 ATGGCAACTGTACAGAGAGTATCGCAGTCCAGTGTGAGCGCGAGTCCTATCAATTATGGCTTAAGTAAAGCAAGTAGTGGGAGTGGCGACGACGCGGTTGTTTCAGATCAGTTTCCAGAGGGATTAAGGGTTCTTGTCGTAGATGATGACACTACCTGCTTGAGAATTCTTGAGCAGATGCTACGCCGGTGTTTATATCATGTGATCACATGTTCCCAAGCATCGGTTGCTCTGAACCTTCTGCGTGAGAAGAAAGGCTGTTTTGATGTGGTATTGAGTGATGTTCATATGCCTGATATGGATGGATACAAGCTCCTTGAGTATGTTGGACTAGAAATGGATCTTCCAGTCATAATGATGTCTGCTGATAAGAGAACGAGTGCGGTCATGAAAGGAATCAGACATGGGGCTTGTGATTATTTAATTAAGCCCATCCGTTATGAGGAACTGAAGAATATCTGGCAGCATGTTGTTAGAAAAAAGTGGAATGAATGTAAGGAACTTGAAAATTCAGGAAGTTTGGAAGATAGTGATAAGCAAAAACGAGTGACTGATGATACCGAATATGCATGTTCTACTCATGAAGGCGAGGAAGGAATTACACAAACTACTAAAAGAAGGAGCAGTACCAAAGAAGAAGACAGCGAACTGGAAAATGATGATCCGTCAGTCTCAAAGAAGCCACGAGTAGTGTGGTCTGTAGAGCTGCACCAACAATTTGTCAGTGCCGTGAACCAACTCGGACTTGATAAGGCTGTGCCAAAAAGAATTCTTGAACTGATGAATGTACCTGGTTTAACAAGAGAAAACGTTGCCAGTCATCTGCAGAAATTTAGACTATATTTAAAGAGGTTAAGTGGAGTAGCTCAACAACAAACTTTTCCAAATATTTATTGTACCCCTTTCGAACAAAATGTTAAATTGGACTCACTTGGAATTGAAGCATTGGCAGTCGCTGGTCAAATTCCTCCACAAACTCTAGCAGCCATGCAAGCTGAACTATTTGGCCGATCAATGGGTAACCTACTACCACCTATGGACCAGGCAGCTGTTTTGCAAGCATCATCACAGGGACCCAAGTTGACTACAATTGAACGGGATCCAATCAATCCATTCAGTCAAACTTTGGTCAAACGCCAAACTAGTGATTCCAAAACTTACCTACGGTCCATTATATCCGTTGACGATGTTACTTCAGGATATAGTGGTGCATGGCCATCGAATAGCCTGAGCGATATAGGGCCAAACAATCATGTTATGATGAGTTCTCAGGATAGTAACATGTTGGTTGGTATAATGCAGGAGCAACAACAACATAAACAATATCAGGAATGGCAACAGCAGCAAAAGCAAAGTCCACACCAGCATCAACAGGACCTGATATTGTCAGAATCCAGCAGCTCAATCAATGTGCAGCCATCTTGCCTCGTTTTGCCCTTACAGCCATCACTCAATTTGCTCCCTGAAAATAGTCCTGATTCTGCCAAACAGAATCACAACATTAATGGGGGTACTATTATTGATTACAGCCTCACCTCACCTCAACACAATAGTTCGATATCAAATTTTAACCAGATATCACATGGGGATCTAAAACCTCTTAATACAATTAGTGCCACTGGGTACTCAGTTCAAGTGTTGGGTTCTCCTAAATCATTTTATTCTGTTACTCATGCCAATAAATATGTGGCTCCAGAGTGA 1701 41.98 MATVQRVSQSSVSASPINYGLSKASSGSGDDAVVSDQFPEGLRVLVVDDDTTCLRILEQMLRRCLYHVITCSQASVALNLLREKKGCFDVVLSDVHMPDMDGYKLLEYVGLEMDLPVIMMSADKRTSAVMKGIRHGACDYLIKPIRYEELKNIWQHVVRKKWNECKELENSGSLEDSDKQKRVTDDTEYACSTHEGEEGITQTTKRRSSTKEEDSELENDDPSVSKKPRVVWSVELHQQFVSAVNQLGLDKAVPKRILELMNVPGLTRENVASHLQKFRLYLKRLSGVAQQQTFPNIYCTPFEQNVKLDSLGIEALAVAGQIPPQTLAAMQAELFGRSMGNLLPPMDQAAVLQASSQGPKLTTIERDPINPFSQTLVKRQTSDSKTYLRSIISVDDVTSGYSGAWPSNSLSDIGPNNHVMMSSQDSNMLVGIMQEQQQHKQYQEWQQQQKQSPHQHQQDLILSESSSSINVQPSCLVLPLQPSLNLLPENSPDSAKQNHNINGGTIIDYSLTSPQHNSSISNFNQISHGDLKPLNTISATGYSVQVLGSPKSFYSVTHANKYVAPE 566
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 54160869 54165795 - Bda004086.1 Bda01g01795 1795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g01795 566 Pfam Myb-like DNA-binding domain 229 277 IPR001005 -
Bda01g01795 566 SUPERFAMILY CheY-like 40 167 IPR011006 -
Bda01g01795 566 MobiDBLite consensus disorder prediction 170 224 - -
Bda01g01795 566 ProSiteProfiles Response regulatory domain profile. 43 158 IPR001789 GO:0000160
Bda01g01795 566 PIRSF RR_ARR_type-B 22 560 IPR017053 GO:0003677|GO:0003700|GO:0009736
Bda01g01795 566 CDD REC_typeB_ARR-like 44 158 - -
Bda01g01795 566 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 227 280 IPR006447 GO:0003677
Bda01g01795 566 MobiDBLite consensus disorder prediction 440 460 - -
Bda01g01795 566 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 226 283 IPR017930 -
Bda01g01795 566 Pfam Response regulator receiver domain 44 152 IPR001789 GO:0000160
Bda01g01795 566 SUPERFAMILY Homeodomain-like 225 284 IPR009057 -
Bda01g01795 566 Gene3D - 223 286 - -
Bda01g01795 566 PANTHER TWO-COMPONENT RESPONSE REGULATOR 37 485 IPR045279 GO:0009736
Bda01g01795 566 SMART REC_2 42 154 IPR001789 GO:0000160
Bda01g01795 566 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR14 37 485 - -
Bda01g01795 566 Gene3D - 42 177 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01795 Bda-Chr1:54160869 Bda08g00304 Bda-Chr8:3176640 8.04E-127 dispersed
Bda03g00918 Bda-Chr3:8109038 Bda01g01795 Bda-Chr1:54160869 1.62E-44 transposed
Bda01g01795 Bda-Chr1:54160869 Bda11g00187 Bda-Chr11:2406265 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
15470 PF00072 Response_reg 3.10E-22 CL0304 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g01795 - K14491 vvi:100250832 628.632