Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g01823 ATGAAGAGGGAACACTTCCAGTTAAATCCTCAACCTGCCCCATCTTCGATGGCCGGAAAATCCAAGCTTTGGGAAGATGGGTCGCAACAAGACGGCGGTGTGGATGAGCTTCTGGCTGTTTTGGGGTACGAAGTTAGGTCATCGGACATGGTCGACGTTGCCCAGAAGCTTGAAAAGCTTGAAGAGTTTATGGGTAATGTTCAGGAAGATGGACTCTCTTATCTTGCATCCGAAACTGTCCATTATAATCCTTCCGATCTATCCACCTGGCTCGAAAGCATGATTTACGAGCTTAACCCATCTCCAACCTTCGATTTTGTCGTCGGGCCACCGGCTAAGTCACCGCTGGACGGTTCGTTTCTACCTCCTGCTGGTTCCTCCACCGTAACCTCCATTGATTTCGCAGAACAAAGAAACCAGAGGTTGTTCGAAGGGTCTTCTAATTCAGATTATGATCTGAAAGCTATACCTGGAAAGGCTATTTGTAACCGAAATACCCAATTTCAAGAAACGTGGTCTAGAGAGAAGAAACGACTAAAACCCTCATCTGAGCTGGAATCCGAATCGGAATCGGAACAATTTTCAGAGTCATTAACTCGGCCTGCAGTCCTAGTTGACTCGCAAGAAAACGGAATTCAACTCGTTCACACACTAATGGCCTGCGCCGAAGCCGTTCACCAAAACAGCCTAAATCTGGCCGAGGCTTTCCTCAAACGAGTCGGCTATCTCGCAGTCTCTCAAACCGGAGCTATGCGGAAAGTCGCCACCTATTTTGCCGAAGCTCTAGCTCGCAGGATTTACAGGCTCTACCCTCGGAACGCTCTCGACCATTCTTTTTCCGATTCGCTTCAATCTCATTTCTACGAGAGTTGTCCTTACCTTAAATTTGCTCATTTCACAGCAAATCAAGCGATTCTCGAAGCTTTTGAAGGTAAAAAACGAGTTCACGTTGTTGATTTTTCTATGAATCAAGGTATGCAGTGGCCGGCGCTTCTTCAAGTTCTGGCTTTGCGACCGGGTGGTCCACCGGCTTTTCGGCTAACCGGAATCGGGCCTCCGGCACGGGATAACTCCGATTATCTCCAAGAAGTCGGCTGGAAGCTCGCCCAATTTGCTGAAATGATTCATGTTAAGTTTGAATACCGTGGGTTTGTCGCCAATAGCTTGGCGGATCTTGATTTGTCGATGCCCCAACTCAGGCCGAGTGAGGACGAATCAGTGGCGGTCAACTCGGTTTTTGAGTTTCATAAGCTCTTGGCTCGACCGGGAGCGGTCGGAAAGGTGTTGTCAGTTGTGAAGCAAATGAAGCCTTCCATCGTGACGGTGGTGGAGCAAGAAGCTAGCCATAACGGACCGAGTTTTATCGACCGGTTCACTGAGTCACTCCATTACTATTCCACTCTGTTTGACTCGTTGGAAGGTTCAGTCACTGCCAACAATCAGGACAAGGCCATGACAGAGATGTACTTGGGGAAGCAAATCTGCGACGTTGTGGCATGTGAAGGCGCAGACAGGGTAGAGCGGCATGAGAATCTGACTCAATGGCGGACTCGGTTCCACTCAGCTGGGTTTGACTCGGCTCCCTTAGGGTCTAACGCGTTCAAACAGGCCAGCATTTTGCTTGCTCTGTTTGGAAGCGGAGATGGGTATGGCGTAGAGGAGAGAAATGGGTGTCTGATGCTGGGCTGGCACAGTAGACCCCTCATCACCACCTCCGCATGGAGGGTGTCAGAGAGAGGAATATTGACTCAGTAA 1755 49.4 MKREHFQLNPQPAPSSMAGKSKLWEDGSQQDGGVDELLAVLGYEVRSSDMVDVAQKLEKLEEFMGNVQEDGLSYLASETVHYNPSDLSTWLESMIYELNPSPTFDFVVGPPAKSPLDGSFLPPAGSSTVTSIDFAEQRNQRLFEGSSNSDYDLKAIPGKAICNRNTQFQETWSREKKRLKPSSELESESESEQFSESLTRPAVLVDSQENGIQLVHTLMACAEAVHQNSLNLAEAFLKRVGYLAVSQTGAMRKVATYFAEALARRIYRLYPRNALDHSFSDSLQSHFYESCPYLKFAHFTANQAILEAFEGKKRVHVVDFSMNQGMQWPALLQVLALRPGGPPAFRLTGIGPPARDNSDYLQEVGWKLAQFAEMIHVKFEYRGFVANSLADLDLSMPQLRPSEDESVAVNSVFEFHKLLARPGAVGKVLSVVKQMKPSIVTVVEQEASHNGPSFIDRFTESLHYYSTLFDSLEGSVTANNQDKAMTEMYLGKQICDVVACEGADRVERHENLTQWRTRFHSAGFDSAPLGSNAFKQASILLALFGSGDGYGVEERNGCLMLGWHSRPLITTSAWRVSERGILTQ 584
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 54372487 54374241 - Bda004115.1 Bda01g01823 1823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g01823 584 MobiDBLite consensus disorder prediction 172 200 - -
Bda01g01823 584 Pfam Transcriptional regulator DELLA protein N terminal 35 102 IPR021914 -
Bda01g01823 584 Pfam GRAS domain family 214 575 IPR005202 -
Bda01g01823 584 ProSiteProfiles GRAS family profile. 205 575 IPR005202 -
Bda01g01823 584 MobiDBLite consensus disorder prediction 172 187 - -
Bda01g01823 584 PANTHER DELLA PROTEIN GAI1-RELATED 14 576 IPR030006 GO:0003712|GO:0005634
Bda01g01823 584 Gene3D - 33 98 IPR038088 -
Bda01g01823 584 SMART DELLA_2 35 108 - -
Bda01g01823 584 MobiDBLite consensus disorder prediction 1 28 - -
Bda01g01823 584 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 14 576 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01823 Bda-Chr1:54372487 Bda13g01801 Bda-Chr13:41827051 0 dispersed
Bda04g00679 Bda-Chr4:55416044 Bda01g01823 Bda-Chr1:54372487 1.55E-51 transposed
Bda12g00998 Bda-Chr12:41328625 Bda01g01823 Bda-Chr1:54372487 6.84E-15 transposed
Bda14g00447 Bda-Chr14:3218135 Bda01g01823 Bda-Chr1:54372487 4.48E-72 transposed
Bda01g01823 Bda-Chr1:54372487 Bda11g00148 Bda-Chr11:1930930 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
15474 PF03514 GRAS 1.60E-133 CL0063 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g01823 K14494 - csv:101204164 823.157