Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g01881 ATGGCAAGTATTGATCCAAGAAATGGGGAGGAGATAGGAAGAGTTGCAGAAGGAGACAAAGAAGATGTTGATTTAGCAGTCCAGTCTGCGAGAGAAGCTTTTGATCATGGCTCCTGGCCTCGCATGCCCGCTTTCGAAAGAGGAAGGATACTACTAAAGCTAGCAGATTTAATTGAAGAAAATGCAGAAGAAATAGCTACTTTAGACGCCATTGACGCCGGAATTTTGTTCAGCATGTCCATAGGATTGAACGTTTCTCATACGGTCCAAATTCTCCGGTACTACGCCGGAGCAGCCGATAAAGTTACCGGTGAAGTGTTTAAAATGTCGAGTGAGTTTCACGGCTACACATTGCTCGAGCCAATAGGAGTGGTCGGCCTCATCATCCCGTGGAATTTTCCATTGGCCATGCTCTTTATCAAGCTTAGCCCTGCCCTTGCAGCCGGCTGCACCGTCGTTGTCAAGCCAGCCGAGAAGACGCCTCTATCGGCTCTCTATTGTGCTCATCTTGCAAAACTGGCCGGAGTGCCAGATGGGGTAGTCAACGTTGTCAATGGGTTTGGACCAACAGCTGGAGCAGCAATCAGCTCACATATGAATATTGACGCAGTGAGTTTTACTGGGTCTACCGAGGTTGGGCGTAAGATAATGGAGGCTGCAGCAAGAAGCAACCTAAAGACAGTTTCGCTTGAACTGGGAGGCAAATCACCTCTCATCATTTTTGATGATGCAGACGTAGAAAAAGCTGCTGAAACTGCACTTCTTGGTGTTGTTTTCAATAAGGGAGAGGTTTGTGTGGCTGGGTCTAGAGTGTATGTTCAAGAAGGAATCTATGATGAGGTTGTGAAGAAGCTTGTGGAGAAGGCTAAGAACTGGGTGGTTGGAGACCCATTTGATCCTACTGCTCAACAAGGACCCCAGGTGGACAAGAATCATTTTGAGAAGATACTTTCCTACATTGATCATGGAAAAAGAGAGGGAGCCACTTTGTTGACAGGTGGAAACTCCATTGGCTTCAAGGGTTATTACATACAGCCCACCATTTTCACTGATGTGAAGGATGACATGGTTATAGCCCGGGAGGAGATATTTGGACCTGTAATGGCACTTATGAAATTCAAGGAAGTGGAAGAAGTTGTGAAAAGGGCAAACTGCACAAAATATGGGTTAGCTGCAGGGATCATGACAAACAACATTGACATAGCCAACACAGTTTCAAGGTCAATCAGGGCAGGATGTGTTTGGATCAATTGCTATTTTGTTGTGGACATTGGAATGCCTTTTGGTGGCTTTAAGATGAGTGGATTTGGCAAGGACTATGGAATGGAAGGTCTCAAAAAGTATCTCCAAGTTAAATCTGTTGTTGCTCCTCTTTATAACTCTCCTTGGCTTTGA 1395 45.45 MASIDPRNGEEIGRVAEGDKEDVDLAVQSAREAFDHGSWPRMPAFERGRILLKLADLIEENAEEIATLDAIDAGILFSMSIGLNVSHTVQILRYYAGAADKVTGEVFKMSSEFHGYTLLEPIGVVGLIIPWNFPLAMLFIKLSPALAAGCTVVVKPAEKTPLSALYCAHLAKLAGVPDGVVNVVNGFGPTAGAAISSHMNIDAVSFTGSTEVGRKIMEAAARSNLKTVSLELGGKSPLIIFDDADVEKAAETALLGVVFNKGEVCVAGSRVYVQEGIYDEVVKKLVEKAKNWVVGDPFDPTAQQGPQVDKNHFEKILSYIDHGKREGATLLTGGNSIGFKGYYIQPTIFTDVKDDMVIAREEIFGPVMALMKFKEVEEVVKRANCTKYGLAAGIMTNNIDIANTVSRSIRAGCVWINCYFVVDIGMPFGGFKMSGFGKDYGMEGLKKYLQVKSVVAPLYNSPWL 464
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 54992407 54996606 - Bda004180.1 Bda01g01881 1881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g01881 464 SUPERFAMILY ALDH-like 2 459 IPR016161 GO:0016491
Bda01g01881 464 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 234 423 IPR016163 GO:0016620
Bda01g01881 464 Pfam Aldehyde dehydrogenase family 2 454 IPR015590 GO:0016491
Bda01g01881 464 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER C4-LIKE 3 464 - -
Bda01g01881 464 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 2 452 IPR016162 GO:0016491
Bda01g01881 464 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 3 464 - -
Bda01g01881 464 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 230 237 IPR029510 GO:0016491
Bda01g01881 464 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 258 269 IPR016160 GO:0016491
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g01881 Bda09g01144 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01881 Bda-Chr1:54992407 Bda11g01261 Bda-Chr11:13221454 0 dispersed
Bda13g00775 Bda-Chr13:9260330 Bda01g01881 Bda-Chr1:54992407 2.08E-44 dispersed
Bda04g01143 Bda-Chr4:62246512 Bda01g01881 Bda-Chr1:54992407 1.08E-43 transposed
Bda13g00863 Bda-Chr13:10245442 Bda01g01881 Bda-Chr1:54992407 3.37E-39 transposed
Bda01g01881 Bda-Chr1:54992407 Bda11g00121 Bda-Chr11:1644231 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g01881 K12355 - jre:108997881 707.212