Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g01894 ATGGACAACAGCCTCGAAGATTACAATCTTTACTGGGAAACAAACACCCTCTTCCAAACTCAAGACCTCGACGACAGTTGGGAATTGGACCCATTCTTCACCCCAAACTACGACTCTAGCTCATCGGACGGCGCAACTTTATCGCCGGTGGTAGCCTCCAAGAACATTGTTTGCGAGAGGAACAGGAGGAAGAAGCTAAACGACAGGCTTCTAGCTCTTAGAGTGGTCATGGACAAGGCTTCTATAATCAAAGATGCAATAAAGTACATACAAGAACTGCACGAGGAAGAGAAGAAAATACAGGAGGAGATTAGGGAGCTGGAAAATGGGAGATTGATTGAGAGAACTTCTTGTGATGTTCTTGATGATTATCCCCTTCCTCTGGTCTTGTTCAGATCAGAGAAGGAGAAGAGGGGACAGATTTTGAATTCTGATGCAGAAAAGAGCTCTCCCATTGACGTTCTTGAATTGAGTGTGACGAACGGGAGCGAGAAGACAGTGGTAGTGAAGTTGAGATGCAGAAACAGAAGAAGAACCACAGTTCAAATCTGCCAAGTATTTGAATCGTTAAAGCTGAAAGTGGTGACGTCCACCATTACTTATTTCTCAGACACCCTGGTGAAGACTGCATTCATCGAGGTCAGTGCTGTTCTGTTCTTCCATTTGTTCTACATTTCCTTTACGTTCCATAATCAGTCAGAAGAACTGAACTGGATCCAAGAAAAAGACGAGTGA 735 44.08 MDNSLEDYNLYWETNTLFQTQDLDDSWELDPFFTPNYDSSSSDGATLSPVVASKNIVCERNRRKKLNDRLLALRVVMDKASIIKDAIKYIQELHEEEKKIQEEIRELENGRLIERTSCDVLDDYPLPLVLFRSEKEKRGQILNSDAEKSSPIDVLELSVTNGSEKTVVVKLRCRNRRRTTVQICQVFESLKLKVVTSTITYFSDTLVKTAFIEVSAVLFFHLFYISFTFHNQSEELNWIQEKDE 244
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 55110866 55112031 + Bda004194.1 Bda01g01894 1894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g01894 244 Gene3D - 52 113 IPR036638 GO:0046983
Bda01g01894 244 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 6 215 - -
Bda01g01894 244 SMART finulus 56 99 IPR011598 GO:0046983
Bda01g01894 244 Coils Coil 83 110 - -
Bda01g01894 244 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 43 108 IPR036638 GO:0046983
Bda01g01894 244 PANTHER TRANSCRIPTION FACTOR BHLH35 6 215 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g01894 Bda02g00261 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01894 Bda-Chr1:55110866 Bda02g00262 Bda-Chr2:40879425 3.01E-57 dispersed
Bda01g01894 Bda-Chr1:55110866 Bda09g00218 Bda-Chr9:3035966 1.38E-09 transposed
Bda01g01894 Bda-Chr1:55110866 Bda04g00147 Bda-Chr4:4033405 1.12E-09 transposed
Bda01g01894 Bda-Chr1:55110866 Bda07g00648 Bda-Chr7:7818050 1.41E-09 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g01894 - - qlo:115965323 199.519