Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g01911 ATGTTAATCTTCTCTTTTGCAGGCAAAAGTAAAAAAGGAGAGCTAAGTATTTTCCCCAAATCGTTTAATGTCCTATCTCATTGTTTGCATATGATGCCAAGGCAGAAAGCTGGCCCAGTTTCTGAGAGTACAAAGGTAGATAAATCTATAGTATGGATCCCGGGCTCTGCAAGGAATCCTGAAACCTATGTTTTAAAAGACCAGGAAACTCGCTATCGTCAACGATACCTTGATTTGATGTTAAACCCAGAGGTGCGTCAAATTTTCAGAACAAGATCCAAGGTCATTCAATATGTAAGAAAATTCCTTGATGAGCTTGATTTCTTGGAGGTTGAAACACCAATGATGAACATGATTGCTGGTGGAGCTGCAGCTCGACCATTTGTAACTCACCACAATGAGCTAAACATGAAACTGTTCATGCGCATTGCACCAGAACTCTACCTTAAAGAATTGGTTGTAGGTGGACTGGACCGGGTATATGAGATCGGTAAACAGTTTAGAAATGAGGGTATTGATTTGACGCATAACCCTGAATTCACCACCTGTGAATTTTACATGGCGTTTGCAGACTACAATGATTTGATGGAGCTCACTGAAAAAATGTTAAGTGGGATGGTCAAAGAACTTACTGGGGGTTACAAAGTTAAATTTCACTCAAATGGGCTTGATAAGGATCCTATAGAGATTGACTTCACTCCCCCATTCAGAAGGATTGATATGATTGAAGATTTGGAAAAGATAGCAAATCTAAATATACCAAAGGACTTGTCCAGTGATGAAACTAATAAATATCTAAGAGAAACATGCAAGAAGTTTGAGATCAATTGTCCTCCTCCTGAAACTACAACTCGTTTGTTGGACAAGCTTGTGGGGCACTTTCTTGAAGATACATGTGTAAATCCAACTTTTATCATCAATCATCCTGAGATAATGAGTCCTTTGGCAAAGTGGCATAGATCAAGACCAGGCTTGACTGAACGTTTTGAATTGTTTGTCAACAAACATGAAGTTTGTAATGCATACACTGAGTTGAATGATCCTGTGGTACAAAGGCAGCGATTCGCAGAACAACTCAAGGATCGACAGTCTGGTGATGATGAAGCAATGGCTTTAGATGAAACCTTTTGTATGGCTCTTGAGTATGGTTTGCCTCCTACTGGGGGTTGGGGGATGGGCATAGATAGACTGGCTATGTTGTTAACGGATTCTCCTAATATTAAGGAAAGCAAGATTCTGAAATTTTTAGGATTCATGTGGAATCCTCTTTCATGGGTGATGGAGGCTGCTGCTATAATGGCTATTGCTTTAGCTAATGGTGGGGTTCTTAGGGATGGAAAATGGAGCGAACAAGATGCTGCAATTTTAGTTCCAGGAGATGTCATTAGCGTTAAATTGGGGGATATCATCCCAGCTGATGCTCGTCTTCTTGAGGGCGATCCATTAAAAATTGACCAATCTGCCCTCACTGGAGAATCACTTCCAGTGACCAAATATCCTGGGGATGAAGTTTTCTCTGGTTCAACGTGCAAGCAGGGAGAGATTGAAGCTGTCGTTATTGCCACTGGTGTTCATACGTTCTTTGGCAAGGCTGCTCATCTCGTTGATAGCACCAATCAAGTTGGTCACTTTCAGAAGGTTCTCACTGCTATCGGGAACTTCTGTATATGTTCTATCGCAGTTGGAATGTTGATAGAACTTATTGTCATGTACCCGATTCAGCACCGACAGTATCGTGATGGAATTGACAATCTTCTCGTTCTTTTGATCGGAGGAATTCCTATTGCCATGCCTACTGTTTTATCTGTCACAATGGCAATTGGGTCGCACAAGCTATCCCAGCAGGGTGCAATCACCAAGCGGATGACTGCAATAGAAGAAATGGCTGGCATGGATGTTCTTTGCAGCGACAAAACTGGGACACTCACTCTTAACAAACTTAGTGTCGATAAGAGTTTAATTGAGGTATTTGCCAAAGGTGTTGATAAAGAGCATGTCATTTTATTAGCGGCAAGGGCATCAAGGACAGAAAACCAAGATGCCATTGATGCCGTCTTTGTTGGAATGCTTGCTGATCCAAAGGAGGCACGAGCGGGCATAACAGAAGTGCACTTCTTGCCGTTCAATCCTGTCGATAAAAGAACTGCATTGACTTATATTGATTCAAACGGAAATTGGCATCGAGCTAGCAAGGGTGCTCCCGAACAAATTATAGCTCTTTGCAATTGCAAAGAAGACGTGAGGAAGAAAGTTCATAATATAATTGACAAATTTGCTGAACGTGGCCTCCGATCGTTAGCTGTAGCCAGACAGGTAGTGCCCGAGAAAAGTAAGGAAAGTTCTGGTGCTCCATGGGAATTTGTTGGTTTATTGCCTCTCTTTGATCCACCAAGACATGACAGTGCAGAGACCATACGAAGAGCTCTCCATCTTGGCGTGAACGTCAAGATGATTACGGGTAACTTGATTCATGTTGATACGAAATTAGGACAAGGATATGCTTTGGAAGTATTAATATTTAATGATTTATATGTAGGTGATCAACTTGCCATAGCAAAGGAAACTGGCCGCCGTCTGGGAATGGGAACAAACATGTATCCCAGCGCTTCCTTACTTGGCCAACACAAGGACGAAAGCATAGCTGGCCTTCCGGTAGAAGAGCTTATAGAGAAAGCAGATGGATTTGCTGGAGTCTTCCCAGAGCACAAATATGAAATTGTTAAGAAGTTGCAAGAGCGAAAACACATATGTGGAATGACGGGAGATGGTGTGAACGATGCTCCTGCTTTAAAGAAAGCAGATATTGGTATTGCTGTTGCTGATGCTACTGATGCAGCACGAAGTGCATCGGATATTGTTCTTACTGAACCTGGTTTGAGTGTCATCATTAGTGCAGTCCTCACAAGCCGAGCTATTTTTCAAAGAATGAAGAACTATACGGTTTTATGCCTTAATTTTTTCATTGTGATTTTACAGTTTGGTTTCATGTTGATTGCCCTCATATGGAAATTTGATTTCTCTCCATTCATGGTTTTAATTATTGCAATTCTAAACGATGGTACGATAATGACGATATCGAAGGATAGAGTGAAGCCGTCTCCATTGCCTGATAGCTGGAAGTTAAAAGAAATATTTGCTACTGGAATTGTGCTTGGAGGCTACTTGGCATTGATGACTGTCGTATTCTTCTGGTTAATAAAAGACACTGATTTCTTCACGGATAAATTTGGTGTAAAATCAATTAGGAATAGCCCTGAAGAGATGATGGCTGCTTTATACCTCCAAGTTAGTATAGTTAGCCAGGCCCTCATTTTTGTGACTCGCTCTCGTAGCTGGTCATTTGTCGAACTCCCCGGCCTTCTTTTATTGACGGCCTTTTTAATCGCACAACTGGTTGCAACTGTCATAGCTGTATATGCTCACTGGAATTTTGCAAAAATAAAGGGAGTTGGATGGGGGTGGGCTGGTGTCATCTGGCTTTACAGTGTCGTCTTCTACTTTCCGCTTGACTTAATGAAGTTTGCTATTCGATATATCTTGAGTGGGAAAGCATGGGTTAACTTGCTCGAAAACAAGACTGCCTTCACCACCAAGAAAGACTACGGAAAAGAGGAAAGAGAAGCTCAATGGGCTCTTGCTCAAAGAACCCTCCATGGCCTTCAGCCGCCACAAGCAACTGACCTTTTCACCGAAAAGAGTAGCTATCGAGAACTTTCCGAGATCGCCGAGCAAGCTAAGAGAAGAGCTGAGATTGCAAGTTTGAGAAACATGGTATCTAAATGCGCTCTTGAAAAATACTTTGTAAATAACAAAATATTGACAAGTTTATTTGTTGGGATTTTTAGGCTTCGAGAGCTTCACACGCTCAAGGGTCACGTAGAGTCAGTAGTGAAGCTCAAAGGGCTAGACATCGATACGATCCAGCAGCATTACACCGTGTGA 3942 41.88 MLIFSFAGKSKKGELSIFPKSFNVLSHCLHMMPRQKAGPVSESTKVDKSIVWIPGSARNPETYVLKDQETRYRQRYLDLMLNPEVRQIFRTRSKVIQYVRKFLDELDFLEVETPMMNMIAGGAAARPFVTHHNELNMKLFMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEFTTCEFYMAFADYNDLMELTEKMLSGMVKELTGGYKVKFHSNGLDKDPIEIDFTPPFRRIDMIEDLEKIANLNIPKDLSSDETNKYLRETCKKFEINCPPPETTTRLLDKLVGHFLEDTCVNPTFIINHPEIMSPLAKWHRSRPGLTERFELFVNKHEVCNAYTELNDPVVQRQRFAEQLKDRQSGDDEAMALDETFCMALEYGLPPTGGWGMGIDRLAMLLTDSPNIKESKILKFLGFMWNPLSWVMEAAAIMAIALANGGVLRDGKWSEQDAAILVPGDVISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKYPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGMLIELIVMYPIQHRQYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHKLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFAKGVDKEHVILLAARASRTENQDAIDAVFVGMLADPKEARAGITEVHFLPFNPVDKRTALTYIDSNGNWHRASKGAPEQIIALCNCKEDVRKKVHNIIDKFAERGLRSLAVARQVVPEKSKESSGAPWEFVGLLPLFDPPRHDSAETIRRALHLGVNVKMITGNLIHVDTKLGQGYALEVLIFNDLYVGDQLAIAKETGRRLGMGTNMYPSASLLGQHKDESIAGLPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTVLCLNFFIVILQFGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGIVLGGYLALMTVVFFWLIKDTDFFTDKFGVKSIRNSPEEMMAALYLQVSIVSQALIFVTRSRSWSFVELPGLLLLTAFLIAQLVATVIAVYAHWNFAKIKGVGWGWAGVIWLYSVVFYFPLDLMKFAIRYILSGKAWVNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPQATDLFTEKSSYRELSEIAEQAKRRAEIASLRNMVSKCALEKYFVNNKILTSLFVGIFRLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 1313
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 55264693 55283158 - Bda004212.1 Bda01g01911 1911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g01911 1313 Gene3D Bira Bifunctional Protein; Domain 2 63 414 IPR045864 -
Bda01g01911 1313 SFLD p-type atpase 617 971 IPR044492 -
Bda01g01911 1313 Gene3D - 632 823 IPR023214 -
Bda01g01911 1313 SUPERFAMILY HAD-like 628 974 IPR036412 -
Bda01g01911 1313 PRINTS H+-transporting ATPase (proton pump) signature 1093 1114 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda01g01911 1313 PRINTS H+-transporting ATPase (proton pump) signature 751 769 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda01g01911 1313 SUPERFAMILY Class II aaRS and biotin synthetases 67 409 IPR045864 -
Bda01g01911 1313 PANTHER PLASMA MEMBRANE ATPASE 442 831 - -
Bda01g01911 1313 PANTHER PLASMA MEMBRANE ATPASE 406 441 - -
Bda01g01911 1313 Gene3D - 441 522 - -
Bda01g01911 1313 PANTHER CALCIUM-TRANSPORTING ATPASE 442 831 - -
Bda01g01911 1313 SFLD Haloacid Dehalogenase 617 971 - -
Bda01g01911 1313 Gene3D - 958 1148 - -
Bda01g01911 1313 Gene3D - 523 631 - -
Bda01g01911 1313 Pfam haloacid dehalogenase-like hydrolase 631 934 - -
Bda01g01911 1313 SUPERFAMILY Calcium ATPase, transduction domain A 442 535 IPR008250 -
Bda01g01911 1313 PANTHER PLASMA MEMBRANE ATPASE 838 1263 - -
Bda01g01911 1313 Gene3D - 647 794 IPR023299 GO:0000166
Bda01g01911 1313 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 444 655 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda01g01911 1313 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 895 1002 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bda01g01911 1313 Coils Coil 1235 1255 - -
Bda01g01911 1313 ProSitePatterns E1-E2 ATPases phosphorylation site. 637 643 IPR018303 -
Bda01g01911 1313 PANTHER CALCIUM-TRANSPORTING ATPASE 838 1263 - -
Bda01g01911 1313 PANTHER CALCIUM-TRANSPORTING ATPASE 406 441 - -
Bda01g01911 1313 SUPERFAMILY Calcium ATPase, transmembrane domain M 408 1180 IPR023298 -
Bda01g01911 1313 Gene3D - 846 957 IPR023214 -
Bda01g01911 1313 Gene3D - 1279 1313 - -
Bda01g01911 1313 Gene3D - 1233 1263 - -
Bda01g01911 1313 TIGRFAM lysS_bact: lysine--tRNA ligase 57 409 IPR002313 GO:0004824|GO:0005524|GO:0006430
Bda01g01911 1313 Pfam E1-E2 ATPase 442 614 - -
Bda01g01911 1313 PRINTS P-type cation-transporting ATPase superfamily signature 485 499 - -
Bda01g01911 1313 PRINTS P-type cation-transporting ATPase superfamily signature 635 649 - -
Bda01g01911 1313 PRINTS P-type cation-transporting ATPase superfamily signature 943 955 - -
Bda01g01911 1313 PRINTS P-type cation-transporting ATPase superfamily signature 920 939 - -
Bda01g01911 1313 PRINTS P-type cation-transporting ATPase superfamily signature 811 821 - -
Bda01g01911 1313 PRINTS P-type cation-transporting ATPase superfamily signature 789 800 - -
Bda01g01911 1313 Pfam tRNA synthetases class II (D, K and N) 67 409 IPR004364 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Bda01g01911 1313 CDD P-type_ATPase_H 408 1174 IPR006534 GO:0008553|GO:0016021|GO:0120029
Bda01g01911 1313 ProSiteProfiles Aminoacyl-transfer RNA synthetases class-II family profile. 89 422 IPR006195 -
Bda01g01911 1313 CDD LysRS_core 82 409 IPR018149 GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01911 Bda-Chr1:55264693 Bda11g00095 Bda-Chr11:1127918 0 dispersed
Bda04g01199 Bda-Chr4:62654015 Bda01g01911 Bda-Chr1:55264693 7.04E-96 dispersed
Bda06g01152 Bda-Chr6:40604394 Bda01g01911 Bda-Chr1:55264693 2.96E-15 dispersed
Bda04g01279 Bda-Chr4:63264067 Bda01g01911 Bda-Chr1:55264693 2.13E-16 transposed
Bda01g01911 Bda-Chr1:55264693 Bda11g00094 Bda-Chr11:1088773 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g01911 K01535 - tcc:18589272 1464.51