Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g01916 ATGGAGGAGAAGAGAGAATTGGTTTATGAAATATCTAAGTGGCCACACGGTGCATCTGAAATACTGCAGTCTTGGAGTCGCCAAGAAATTTTACAAATCCTGTGTGCAGAGATGGGAAAAGAAAGGAAATATACTGGCTTGACAAAATTGAAAATAATAGAAAATCTTCTTAAAATTGTATCTGAAAAGCATTCAGGAGAATCAGATGTCATACAGTTCTCAGCTGCGTTGGGTCATAAAACAACCAAAAGGCAGAAGAAAACTGATCACCCATCTCAGCTACCAGTTCCTTCGAGCAGTGGTTTTGTCACCGATGGTGGTGGCAATTCTAAAAAGATGATCTACTGCAAAAACTCAGCCTGTAAAGCAACCTTAAATCAAGGAGATACATTTTGTAGAAGGTGTTCTTGCTGCATTTGCCATCAGTATGACGACAACAAAGATCCCAGTCTATGGTTAAGTTGCAGTTCGGAGCGGCCATTTCTAGGTTATTCATGTGGAATGTCATGCCATCTTGAATGTGCGATGAAACACGAGAGTTCTGGCATTACAAAAAAACATCAGCCAGAGACGGATGGAACTTTTCACTGTGTATCATGTGGCAAGTTGAATGATTTTCTCGGATGCTGGAGAAAACAATTGATAATTGCAAAGGAGACCAGAAGGGTGGACATACTCTGTTATCGTGTTTCCTTGACTCAAAAGCTCATCAACGGAAGTGAAAAGTATGAAAAACTTCATCAGTTGGTAGATGAAGCTGTGGAGAAGCTCGAAACTGAAGTGGGCCCGTTAACTGGCCTACCTGTTAAGATGAGTCGAGGTATTGTGAATAGACTTTCTTCGGGACAAGAGGTTCAAAAACTCTGCGCATCTGCAGAGAAATTACTCGATGAAATAATCCATTCCCTATCCAATGCTATTAAACAAGATTTAAATTTAATTACTCCAAATTTTGTCAAATTTGAAGAAGTCCAAGCAACTTCGCTTACTCTAGTTTTGGGTTGTGAAGATATGCCCCCTGAGAGTACTATTAGTATCTGGCATCGGAAGTCGTTCCATAACTATTACCCTTTTGATCCAACTTTTACACAATTCGCACCGAATGGAAGGTTTATTTTCACAGGATTAATGCCCGCTTCAGACTACATTTTCAAAGTTTTAGTGTATAATGGAGATAAAGAGATGGTTAGGTGTGAAGCTCAATGCTCAACGAGCAGGGATGAAGTCAATGAGACGATGGTGATGGAAAGAACTCAAAGTCTGGCCACCATTTGCAGTGACCTTTCAAATCCTTCTTCCATGGAAGATGAGACTAACAACACTTTACCTGATCATGACCGGGACAATAACCAAGCCAATAAGTATCTTTCTTACTGCACCAACAATGAGAAGAGTGTCTATGCTAATTTATCGAATGGTGATACGAACTGCACTGAGACGGGTGGAGAAAGAAAGCCAGTTGATAAAGGTTCTTTGTTGGGCAATGAACACTCCAATGGAATCGCGGCCGAGTTTTCAAAGCTCGAGAAGAACTCATCGGAGGGTCAACTGGATGAGGATATGGACACAGCAAATGGGTCTGAATCTCCTGTCCAGACGGGAATGGAATGTGTGCCATTTAGTTCTTCTGAAGAAGCTTGCTTACCCATAACTCCTTGCAAATTGGAACTGATAAAGTACGGCCTCGTAAAAAGTGGACGGTCCAAATCGAACAGCAAAGAAAAAATGGAGGAGCTTCAAGGTGGGAGGTCAGCAAAGAAAAGAAATGGAGAAAGTCAAGAAGATGAATACGCGGGAAATGGTGTTTCGGATCGAGATTTCGAATACTACGTGAAGGTGATTCGATGGTTAGAGTGCGAAGGACACATTGAGAAGAATTTCCGGCAGAAATTCTTGACTTGGTACAGCTTGAGAGCATCCCAAGAGGAAATAAAAATTGTAAAGGTGTTTGTAGATACCTTCATTGAAGACCCATCTTCTCTGGCCGAGCAACTCGTCGACACTTTCTCGGAAAGTATATCCTGCAGCAAAAACTCTATGGTCCCGCCTGGATTCTGCATGAAACTCTGGCATTGA 2076 41.62 MEEKRELVYEISKWPHGASEILQSWSRQEILQILCAEMGKERKYTGLTKLKIIENLLKIVSEKHSGESDVIQFSAALGHKTTKRQKKTDHPSQLPVPSSSGFVTDGGGNSKKMIYCKNSACKATLNQGDTFCRRCSCCICHQYDDNKDPSLWLSCSSERPFLGYSCGMSCHLECAMKHESSGITKKHQPETDGTFHCVSCGKLNDFLGCWRKQLIIAKETRRVDILCYRVSLTQKLINGSEKYEKLHQLVDEAVEKLETEVGPLTGLPVKMSRGIVNRLSSGQEVQKLCASAEKLLDEIIHSLSNAIKQDLNLITPNFVKFEEVQATSLTLVLGCEDMPPESTISIWHRKSFHNYYPFDPTFTQFAPNGRFIFTGLMPASDYIFKVLVYNGDKEMVRCEAQCSTSRDEVNETMVMERTQSLATICSDLSNPSSMEDETNNTLPDHDRDNNQANKYLSYCTNNEKSVYANLSNGDTNCTETGGERKPVDKGSLLGNEHSNGIAAEFSKLEKNSSEGQLDEDMDTANGSESPVQTGMECVPFSSSEEACLPITPCKLELIKYGLVKSGRSKSNSKEKMEELQGGRSAKKRNGESQEDEYAGNGVSDRDFEYYVKVIRWLECEGHIEKNFRQKFLTWYSLRASQEEIKIVKVFVDTFIEDPSSLAEQLVDTFSESISCSKNSMVPPGFCMKLWH 691
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 55343656 55346462 - Bda004218.1 Bda01g01916 1916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g01916 691 Coils Coil 240 260 - -
Bda01g01916 691 MobiDBLite consensus disorder prediction 518 535 - -
Bda01g01916 691 MobiDBLite consensus disorder prediction 427 452 - -
Bda01g01916 691 PANTHER VIN3-LIKE PROTEIN 2-RELATED 1 691 IPR044514 GO:0010048|GO:0040029
Bda01g01916 691 MobiDBLite consensus disorder prediction 81 102 - -
Bda01g01916 691 Pfam PHD - plant homeodomain finger protein 116 234 IPR032881 -
Bda01g01916 691 MobiDBLite consensus disorder prediction 569 599 - -
Bda01g01916 691 PANTHER VIN3-LIKE PROTEIN 2-RELATED 1 691 - -
Bda01g01916 691 MobiDBLite consensus disorder prediction 472 496 - -
Bda01g01916 691 MobiDBLite consensus disorder prediction 509 535 - -
Bda01g01916 691 CDD PHD_VIN3_plant 136 200 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00908 Bda-Chr1:42078232 Bda01g01916 Bda-Chr1:55343656 6.28E-55 dispersed
Bda01g01916 Bda-Chr1:55343656 Bda09g01163 Bda-Chr9:42460490 2.02E-26 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g01916 - - zju:107428695 854.358