Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g01923 ATGGGAAGTCCTTCAGCAACCCCGCCTTCACCTCCCACCTTCTCTCCCGGACTTAGTCCTGGTTCGACTGATGAGACGCCACGTGTGAAGTTTCTATGTAGTTTTCTAGGAAGTATAATGTCTCGCCCACAAGACGGAAAGCTTCGCTATGTTGGTGGAGAGACTCGAATTGTTAGTGTGTCCAGAGACATTACTTACGAGGAGTTAATGAATAAGATGAAGGAAATTTATGAAGGAGCATCGCTTCTCAAGTATCAGCAACCAGATGAAGATCTTGATGCTCTTGTGTCCATTGTGAATGATGATGATGTAATTAATATGATGGAGGAATATGACAAATTGGGTTCAGGTGATGGATTCATTAAGCTTAGGATGTTTTTATCTTCTCACTCTGATCTAGATGGTTCTTCTGCTTTTATTGATGGAGATGAGAGGGATAATGAGAGAAGATATGTCGATGCTCTTAATAATTTAAACGATGCTACTGATTTTAGGAAACAACTGCTTCCTGATTCTCCTGTGATTGGCCCTCTAGAGGATATATATGGGTCTGACCAGTATTTCAATCCATCAGGTCTTGATGGAAGCTTCCATAGCCAAAGGAATTTCGATCCCTTGTCACAATATAATCTCTGTCACCTTGCAATGCCTCAGCAATCTGTTTCTCAGAGGTATAATGAAATGGAAGCTCCATGGAGTCCTGCTTACTATTCTCCTAGGCATCATGGGCCCCAGGATTCAAGGTCAATGCCTGAATTTCCGTCTTCTCCTTCTTCCATGAGGTATAGAATGCCGTTTGCAGATTTACCTTCTGAAGACTATGTTCTGCAGTCGGTGAACCACCTGCCTACATTTGAACACCAGCCACAATTTTCAGAGAATGTTGTGTGGCTGCAAAATGGAGTTGTAACTTGTGAAAAGTCAGGTTTTCCTGGTAATATTCTTCATAGTCACAGTGTTTTCGATGGGGGCAGTATTTGTGAGCATTGCCGGATGAATTTTCAAAGAAATCAACCCCATTTGGAGCACACCAATGTAGTTAATGGACATGCTCAAGTTGGAAATCCATGCCTTGAATGCATTCCTAGTCGGGAAATTGTCATGGTAAATTCAGATGCAAGAATTTTCTCCAATGATGCGAATAATGATACTCAAAATCACGAGAGAGGATGGATTTTGCAGCATCAGTTGAATATGCGAGTTGACGATCCAAGAGTACATGCATCTGGTGCAGGAAGAATGAATGATCAATATGTAATGGATGGTCCAAATTTGAATTTCCCTATCGGGCAAAATAATTTTATCGATGGTCATTATGTATCCACAAATTTACGACAATGTGCTAGGTCAGAAATGGGAAATGATGTATATAATGATCAAGCAGTTCCTATCACATCACAGTTGCACATTACAACACCAGATGAACAAGTTCGATATGGATATATGCCATACGTATATGGTGGAGACAATCCGCACCCATCAATTTCACATAGTCATGTACCTGGAAATGTTGTGTGGAGAAATATTACAAATCCAATGCATGTTGCTCCTTCTCCCTCTTACGAAGCATCCAATTCTCATCAAGTGAATGGTATAGTTAATTCAGGATATGTGAGGGGTGTAAGAGAAGGCACTGTACAGTTTTGTACTGGCATCGACAATCAAAATCCCTTGCTTGATTCCTCTCAAAACATTGGGTTTCAGGGAACTGGCTGTTCGGAATACTTGTATGAAAAGGCTTTGAGAATCAATACAAACTCTATGTGCCAGGAAAATAACAATTGTCCCGGTCTAGATGATGTTCGATCAACACCCGATAAAAGAAATGTTGAGCAATCAGACTCATCGTCTCTATTGGATAACGATAAATTGGTACTTTCTACTACTCCTATTCTGAATCCACAATCAAATATTGATGTCAATTTAACAGAAAATATGAGGTTGGAGATCTCAAATATCCCAGGAGAAGAGGCAAGTTCTTTAGTAAGAGTTGACAATGGTGATGCCCAGTCTGTTGAATGTTCAGAGCATCACAAATTAGTAGATGATAGCTCCCCAGTGGTACCTTTTGATTTTCCAATATGCTTAAATGAACCAGAAAAGAATGGTGGTGTTAAGAAACCAGTTGGAGAAGATGTTATTGCTACTGAAGAATTGAGTATCTCTGTCAACCATATGAATTTCTTACCTGACTTAATTGCTTCGGTAAAGCAAGTAGCATTAGAAGAAGCTGAAGAGGTCACAACGGAAGTCTCTGAAAGTGCGGCAACAAAGCCTGACTCAGTGGCGAAAGAAGAAATGTCAAATGAGTTAGAAACAACGAATGCCTTAGGAGGGTCAGAGCAGGAAGCTGATAATGACTATTTAAAACCATCGAAAATTGAGCCAACAAAGGCTGAGGCAGAAGCCATTGCCAGGGGATTGCAGACGATTAAAAATGATGATCTGGAGGAGATCCGAGAACTTGGATCTGGGACATATGGGTCTGTTTATCATGGAAAATGGAGAGGTTCTGACGTAGCAATAAAGAGAATTAAAGCCAGTTGCTTTGCTGGGCGACCGTCTGAAAGAGAACGCTTGATTGCAGATTTCTGGAAGGAGGCTTTGATATTAAGTTCTTTACATCACCCAAATGTTGTTTCTTTTTATGGCATTGTCCGTGATGGTCCTGATGGGTCCTTAGCGACTGTAACAGAGTTCATGATAAATGGATCCTTAAAACAGTTTTTGCAGAAGAAGGACAGAACCATTGATCGTCGGAAGAGACTCATCATTGCTATGGATGCTTCATTTGGAATGGAGTATTTGCATGGAAAGAACATTGTACATTTTGATTTGAAATGTGAAAATCTTTTAGTGAACATGAGGGATCCACAAAGACCCGTATGCAAGATTGGCGATTTAGGCTTATCAAAGGTGAGACAGCACACTTTAGTCTCCGGGGGTGTTCGGGGAACTTTACCGTGGATGGCTCCCGAGCTTCTTAGTGGAAAAAGTAACATGGTTACTGAAAAGGTGAAGCTACCTGAAAGTTACTGGAGAAGAAGAGAATTCTTTTCGAGAAAAGAGAAATTATTAGCCAAATTAGCTGCAAATCAATACAGAGCAAATCTACGATCTGAAGAAGAGTTGAAGGGTGCCGTTGCCCTCATTTTTGCAAACAAGCAGGATCTTCCTGGTGCGCTTGATGATGCTGCAGTAACTGAGGCCTTAGAGTTGCACAAGATAAAAAACCGCCAATGGTCCATTTTTAAAACTTCTGCTATAAAAGGAGAAGGTCTCTTTGAGGGTTTGGATTGGTAA 3303 40.75 MGSPSATPPSPPTFSPGLSPGSTDETPRVKFLCSFLGSIMSRPQDGKLRYVGGETRIVSVSRDITYEELMNKMKEIYEGASLLKYQQPDEDLDALVSIVNDDDVINMMEEYDKLGSGDGFIKLRMFLSSHSDLDGSSAFIDGDERDNERRYVDALNNLNDATDFRKQLLPDSPVIGPLEDIYGSDQYFNPSGLDGSFHSQRNFDPLSQYNLCHLAMPQQSVSQRYNEMEAPWSPAYYSPRHHGPQDSRSMPEFPSSPSSMRYRMPFADLPSEDYVLQSVNHLPTFEHQPQFSENVVWLQNGVVTCEKSGFPGNILHSHSVFDGGSICEHCRMNFQRNQPHLEHTNVVNGHAQVGNPCLECIPSREIVMVNSDARIFSNDANNDTQNHERGWILQHQLNMRVDDPRVHASGAGRMNDQYVMDGPNLNFPIGQNNFIDGHYVSTNLRQCARSEMGNDVYNDQAVPITSQLHITTPDEQVRYGYMPYVYGGDNPHPSISHSHVPGNVVWRNITNPMHVAPSPSYEASNSHQVNGIVNSGYVRGVREGTVQFCTGIDNQNPLLDSSQNIGFQGTGCSEYLYEKALRINTNSMCQENNNCPGLDDVRSTPDKRNVEQSDSSSLLDNDKLVLSTTPILNPQSNIDVNLTENMRLEISNIPGEEASSLVRVDNGDAQSVECSEHHKLVDDSSPVVPFDFPICLNEPEKNGGVKKPVGEDVIATEELSISVNHMNFLPDLIASVKQVALEEAEEVTTEVSESAATKPDSVAKEEMSNELETTNALGGSEQEADNDYLKPSKIEPTKAEAEAIARGLQTIKNDDLEEIRELGSGTYGSVYHGKWRGSDVAIKRIKASCFAGRPSERERLIADFWKEALILSSLHHPNVVSFYGIVRDGPDGSLATVTEFMINGSLKQFLQKKDRTIDRRKRLIIAMDASFGMEYLHGKNIVHFDLKCENLLVNMRDPQRPVCKIGDLGLSKVRQHTLVSGGVRGTLPWMAPELLSGKSNMVTEKVKLPESYWRRREFFSRKEKLLAKLAANQYRANLRSEEELKGAVALIFANKQDLPGALDDAAVTEALELHKIKNRQWSIFKTSAIKGEGLFEGLDW 1100
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 55428825 55438734 + Bda004226.1 Bda01g01923 1923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g01923 1100 Gene3D - 47 130 - -
Bda01g01923 1100 Pfam Protein tyrosine and serine/threonine kinase 817 999 IPR001245 GO:0004672|GO:0006468
Bda01g01923 1100 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1037 1100 IPR027417 -
Bda01g01923 1100 ProSitePatterns Serine/Threonine protein kinases active-site signature. 941 953 IPR008271 GO:0004672|GO:0006468
Bda01g01923 1100 MobiDBLite consensus disorder prediction 592 617 - -
Bda01g01923 1100 Pfam PB1 domain 44 127 IPR000270 GO:0005515
Bda01g01923 1100 Pfam ADP-ribosylation factor family 1037 1100 IPR006689 GO:0003924|GO:0005525
Bda01g01923 1100 MobiDBLite consensus disorder prediction 1 25 - -
Bda01g01923 1100 PANTHER SERINE-THREONINE PROTEIN KINASE 20 1006 - -
Bda01g01923 1100 SUPERFAMILY Protein kinase-like (PK-like) 804 1002 IPR011009 -
Bda01g01923 1100 MobiDBLite consensus disorder prediction 747 787 - -
Bda01g01923 1100 SMART arf_sub_2 944 1100 - -
Bda01g01923 1100 CDD PB1_UP2 32 127 - -
Bda01g01923 1100 SMART PB1_new 43 128 IPR000270 GO:0005515
Bda01g01923 1100 Gene3D Transferase(Phosphotransferase) domain 1 902 1007 - -
Bda01g01923 1100 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 20 1006 - -
Bda01g01923 1100 ProSitePatterns Protein kinases ATP-binding region signature. 822 843 IPR017441 GO:0005524
Bda01g01923 1100 Gene3D - 1020 1100 IPR027417 -
Bda01g01923 1100 MobiDBLite consensus disorder prediction 1 16 - -
Bda01g01923 1100 SMART serkin_6 816 1077 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g01923 1100 ProSiteProfiles Protein kinase domain profile. 816 1100 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g01923 1100 Gene3D Phosphorylase Kinase; domain 1 802 901 - -
Bda01g01923 1100 SUPERFAMILY CAD & PB1 domains 45 133 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01923 Bda-Chr1:55428825 Bda13g00024 Bda-Chr13:450224 4.88E-26 dispersed
Bda01g01923 Bda-Chr1:55428825 Bda01g01930 Bda-Chr1:55558419 0 proximal
Bda11g00006 Bda-Chr11:110002 Bda01g01923 Bda-Chr1:55428825 2.23E-09 transposed
Bda01g01923 Bda-Chr1:55428825 Bda11g00996 Bda-Chr11:9741100 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69464 PF07714 PK_Tyr_Ser-Thr 1.10E-35 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g01923 - - tcc:18589217 1184.86