Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g01926 ATGGGTTCCCTGTCCAACCAGCATGAATTCATTTTCCGGTCGAAACTCCCCGATATTTACATCCCCAACCATCTCCCTCTCCACTCTTACTGCTTCGAAAACATATCCGAGTTTGAAGATCGCCCATGTTTGATCAATGGCGCCACCGGCGAGACGTTTACGTACGCCTCCGTCGAGCTGACTTCCAGGAAAGTCGCCGCCGGACTGAGCAAGGTCGGGGTCGGAAAGGGTGACGTCATAATGCTTATGCTCCAAAACAGCTCTGAATTCGTGTTTGCTTTTCTCGGGGCTTCTCATCTGGGAGCAATAAGTACGACGGCGAACCCGTTCTACACTCCAGCGGAGGTGACGAAGCAGGCGAAATCGGCGGCCGTGAAGCTGATCATTACCCAGTCAGCGTACGTAGAAAAAGTAAGGGATTTCGCGAAGGAAAATGGCGTTAAGTTGATGTGTATAGACTCGCCGCCGGACGGGGTCATGCATTTTTCGGAGCTGACTCAGGCGGACGAGAGAGACATTCCGGCGGTGAAAATCAACGCAGACGACGTCGTTGCGTTGCCTTATTCGTCCGGAACGACAGGACTTCCTAAAGGAGTAATGCTTACCCACAAAGGACTCGTCACTAGCGTTGCTCAACAGGTTGACGGAGAAAACCCTAACTTGTACTTTCACAAAAATGATGTGATACTCTGTACACTACCAATGTTTCACATCTACTCTCTGAACTCCGTTCTGCTCTGTGCTCTCCGAGTAGGAGCCGCCATTTTAATCGTTCAGAAGTACGACATCAAAGGTTTGCTTGAGCTTGTTGAGAAATATAAGGTGACGATAGCTCCGTTGGTCCCTCCGATTGTGCTAGACATAGCAAAGAGCGCAGAAATCGATAAATACGATTTGTCGACGATAAGAATTGTGATGTCCGGCGCTGCTCCGATGGGGAAGGAGCTTGAAGACACTGTCAGTGCTAAGCTTCCTAATGCCAAGCTAGGCCAGGGGTATGGAATGACAGAGGCTGGGCCAGTGCTATCAATGTGCTTGGCCTTTGCGAAGGAACCGTTCGAGATCAAATCAGGTGCGTGCGGGACCGTGGTAAGAAATGCTGAGATGAAGATCATTGACCCTGAAACTGGACTCTCTCTTCCAAAGAATCAATCAGGAGAGATCTGCATCAGAGGCAGCCAGATCATGAAAGGTTACTTGAACGACGGGGAGGCCACGAAGAGAACCATCGACGGCGACGGGTGGCTCCACACCGGCGACGTGGGATACATTGATGATGACGATGAGGTTTTTATAGTGGACCGGCTGAAAGAGTTGATCAAGTACAAAGGGTTTCAGGTTGCCCCGGCTGAGCTCGAGGCCTTACTGGCTGCTCATCCTAAGATATCTGCTGCTGCTGTTGTGTCCATGAAAGATGAGACTGCGGGAGAGATTCCAGTTGCTTTTGTTGTTAAATCAAATGGTTGGAAGATCAGTGAGGATGATATCAAGAAGTACATCTCAGATCAGGTGGTGTTCTACAAGAGAATAAGAAGAGTGTTCTTTGTGGAGTCGATTCCAATAGCTCCATCAGGGAAGATCTTGAGAAAGAATTTAAGAGCAAGGCTTGCAGAGATGGAGGCCTAA 1626 49.38 MGSLSNQHEFIFRSKLPDIYIPNHLPLHSYCFENISEFEDRPCLINGATGETFTYASVELTSRKVAAGLSKVGVGKGDVIMLMLQNSSEFVFAFLGASHLGAISTTANPFYTPAEVTKQAKSAAVKLIITQSAYVEKVRDFAKENGVKLMCIDSPPDGVMHFSELTQADERDIPAVKINADDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHKNDVILCTLPMFHIYSLNSVLLCALRVGAAILIVQKYDIKGLLELVEKYKVTIAPLVPPIVLDIAKSAEIDKYDLSTIRIVMSGAAPMGKELEDTVSAKLPNAKLGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTVVRNAEMKIIDPETGLSLPKNQSGEICIRGSQIMKGYLNDGEATKRTIDGDGWLHTGDVGYIDDDDEVFIVDRLKELIKYKGFQVAPAELEALLAAHPKISAAAVVSMKDETAGEIPVAFVVKSNGWKISEDDIKKYISDQVVFYKRIRRVFFVESIPIAPSGKILRKNLRARLAEMEA 541
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 55508683 55511183 + Bda004230.1 Bda01g01926 1926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g01926 541 ProSitePatterns Putative AMP-binding domain signature. 186 197 IPR020845 -
Bda01g01926 541 PANTHER 4-COUMARATE--COA LIGASE 2-LIKE 6 537 - -
Bda01g01926 541 Gene3D - 437 539 IPR045851 -
Bda01g01926 541 Pfam AMP-binding enzyme 33 442 IPR000873 -
Bda01g01926 541 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 6 537 - -
Bda01g01926 541 Gene3D - 3 436 IPR042099 -
Bda01g01926 541 CDD 4CL 21 532 - -
Bda01g01926 541 Pfam AMP-binding enzyme C-terminal domain 451 526 IPR025110 -
Bda01g01926 541 SUPERFAMILY Acetyl-CoA synthetase-like 9 539 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g01926 Bda02g00282 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01926 Bda-Chr1:55508683 Bda02g00282 Bda-Chr2:41425929 0 dispersed
Bda04g01132 Bda-Chr4:62114168 Bda01g01926 Bda-Chr1:55508683 1.84E-68 dispersed
Bda07g00643 Bda-Chr7:7773464 Bda01g01926 Bda-Chr1:55508683 3.28E-122 dispersed
Bda01g01922 Bda-Chr1:55391381 Bda01g01926 Bda-Chr1:55508683 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g01926 K01904 - qsu:111992978 874.774