Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g01928 ATGCAGAGACAGACTAGGTTAATGGAGAGGACGAACTCTATGAGAGGAAAAAGGAGCTTGGAGGGTGGCGATGAGGAGCAACAGGAGCGAAAGCGGCCTGCCCTTGCCAGTGTGATTGTGGAAGCGCTGAAGGTGGATAGTTTGCAGAAGCTGTGCTCATCTTTGGAGCCTATCCTCCGAAGAGTTGTGAGTGAGGAAGTGGAACGTGCTTTGGCAAAGTTAGCTCCTGCTAGACTTAGTGGAAGGTCTTCTCCAAAACGAATTGAAGGTCCTGATGGAAGAAATTTACAACTGCAGTTTAAATCTAGATTATCTCTTCCCTTGTTCACTGGAGGTAAAGTGGAAGGCGAGCAGGGTGCCACAATTCATATTGTTCTACTTGATGTCAACAGTGGACGTGTTGTAACTATAGGTCCTGAAGCATCGGCAAAACTAGATGTTGTTGTCCTTGAAGGTGATTTCAACAACGAAGATGATGAAGACTGGACAGTGGAAGAATTTGAAAGTCATGTGGTCAAGGAGCGTGAAGGAAAAAGGCCTTTATTAACTGGGGATCTCCAAGTTACTTTGAAAGAAGGAGTTGGAACATTAGGAGATCTCACTTTCACTGATAATTCAAGCTGGATCAGGAGCAGAAAGTTTAGACTTGGCTTGAGGATTTCTGCTGGAATGTTTGATGGCACACGGATACGTGAGGCAAAGACCGAAGCATTTACTGTTAAAGATCACAGAGGAGAATTGTACAAGAAACATTATCCTCCAGCATTAAATGATGAAGTATGGAGATTAGAAAAGATTGGGAAAGATGGTTCATTCCATAAAAGACTAAATGCTAACGGAATATTTTCTGTTCAAGACTTCCTTCGATTGGTTGTTCGAGACTCACAAAAGCTACGAACCATTCTTGGGAGTGGAATGTCAAACAAGATGTGGGAAGCTCTCTTAGAGCATGCTAAAACATGTGTGCTTAGTGAGAAGCTTTATATTTACTATTCTGAGGATACAAGAAATGTTGGAGTTGTGTTCAACAATATCTATGAGCTAAGTGGCCTAATTGCAGGAGATCAATATCATTCTGCCGACTCGCTTTCTGACAGTCAGAAGGTCTTTGTTGATGCACAGGTGAAAAAAGCATATGATCAGAAGCTGTGCTCATCTTTGGAGCCTATCCTCCGAAGAGTTTTTAAATCTAGATTATCTCTTCCCTTGTTCACTGGAGGTAAAGTGGAAGGCGAGCAGGGTGCCACAATTCATATTGTTCTACTTGATGTCAACAGTGGACGTGTTGTAACTATAGGTCCTGAAGCATCGGCAAAACTAGATGTTGTTGTCCTTGAAGGTGATTTCAACAACGAAGATGATGAAGACTGGACAGTGGAAGAATTTGAAAGTCATGTGGTCAAGGAGCGTGAAGGAAAAAGGCCTTTATTAACTGGGGATCTCCAAGTTACTTTGAAAGAAGGAGTTGGAACATTAGGAGATCTCACTTTCACTGATAATTCAAGCTGGATCAGGAGCAGAAAGTTTAGACTTGGCTTGAGGATTTCTGCTGGAATGTTTGATGGCACACGGATACGTGAGGCAAAGACCGAAGCATTTACTGTTAAAGATCACAGAGGAGAATTGTACAAGAAACATTATCCTCCAGCATTAAATGATGAAGTATGGAGATTAGAAAAGATTGGGAAAGATGGTTCATTCCATAAAAGACTAAATGCTAACGGAATATTTTCTGTTCAAGACTTCCTTCGATTGGTTGTTCGAGACTCACAAAAGCTACGAACCATTCTTGGGAGTGGAATGTCAAACAAGATGTGGGAAGCTCTCTTAGAGCATGCTAAAACATGTGTGCTTAGTGAGAAGCTTTATATTTACTATTCTGAGGATACAAGAAATGTTGGAGTTGTGTTCAACAATATCTATGAGCTAAGTGGCCTAATTGCAGGAGATCAATATCATTCTGCCGACTCGCTTTCTGACAGTCAGAAGGTCTTTGTTGATGCACAGGTGAAAAAAGCATATGATAATTGGGATCAAGTTATCGAGTATGATGGGAAGTCACTTTTTAGCTTCAAGCATAATACAAAGAAGTCAAGCATTTCCAGGAATGAACATCATGCTGGCCATCTTGATTTCTCAAATACTGTAGAGCATGAAATGCCACTTTCACGTCTGCCTGTGTCAGTACCATCCGAACAGGCTTTAGTAGAATCAGGTCTGCCTGTTGGAGGTTTTGTTTATAATGATAGCATGGCCACAAGATATTCAAACCAGTCACAGGTTGCGAATTCAACAAATTCTCGTTCCCGATTTGTAAATACTGGATATGCACAGAACGAGTTGGTTAATAATGCTCACCAAACTGAGAACACGAGAAATGCTCAAACTTCTTTCAGTTTGGCTCTTGGCCCACCCCAATCGTCCATGTCTGGCTTTCAAACTATTGGTTCATCCAGTCAGCAATCTAACATCAATCCATTTGATGATTGGTCAAACAACCGAGAGAAAGGTGTCGACCACTTCCTTTCAGAGGAAGAGATTCGTCTTAGAAGTCATGAAATGCTTGAAAATGAAGATATGCAGCATTTACTACAAATGTTCAGTATGGGCGGTCATGCATCTGTAAATATGCCCGACGACGGATATGCATTTCCTCCATTTATGTCATCTCCAATGCCTCATTTTGAGGAAGATCGAGGCCGGTCTGGAAGAGCTGTAGTCGGGTGGTTGAAAATCAAAGCAGCTATGAGGTGGGGATTCTTTATACGGAAAAAAGCCGCAGAGAGGCGAGCTCAGATTGTTGAGTTGGAAGAATGA 2817 41.82 MQRQTRLMERTNSMRGKRSLEGGDEEQQERKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKLAPARLSGRSSPKRIEGPDGRNLQLQFKSRLSLPLFTGGKVEGEQGATIHIVLLDVNSGRVVTIGPEASAKLDVVVLEGDFNNEDDEDWTVEEFESHVVKEREGKRPLLTGDLQVTLKEGVGTLGDLTFTDNSSWIRSRKFRLGLRISAGMFDGTRIREAKTEAFTVKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNANGIFSVQDFLRLVVRDSQKLRTILGSGMSNKMWEALLEHAKTCVLSEKLYIYYSEDTRNVGVVFNNIYELSGLIAGDQYHSADSLSDSQKVFVDAQVKKAYDQKLCSSLEPILRRVFKSRLSLPLFTGGKVEGEQGATIHIVLLDVNSGRVVTIGPEASAKLDVVVLEGDFNNEDDEDWTVEEFESHVVKEREGKRPLLTGDLQVTLKEGVGTLGDLTFTDNSSWIRSRKFRLGLRISAGMFDGTRIREAKTEAFTVKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNANGIFSVQDFLRLVVRDSQKLRTILGSGMSNKMWEALLEHAKTCVLSEKLYIYYSEDTRNVGVVFNNIYELSGLIAGDQYHSADSLSDSQKVFVDAQVKKAYDNWDQVIEYDGKSLFSFKHNTKKSSISRNEHHAGHLDFSNTVEHEMPLSRLPVSVPSEQALVESGLPVGGFVYNDSMATRYSNQSQVANSTNSRSRFVNTGYAQNELVNNAHQTENTRNAQTSFSLALGPPQSSMSGFQTIGSSSQQSNINPFDDWSNNREKGVDHFLSEEEIRLRSHEMLENEDMQHLLQMFSMGGHASVNMPDDGYAFPPFMSSPMPHFEEDRGRSGRAVVGWLKIKAAMRWGFFIRKKAAERRAQIVELEE 938
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 55536200 55548697 - Bda004233.1 Bda01g01928 1928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g01928 938 MobiDBLite consensus disorder prediction 10 31 - -
Bda01g01928 938 MobiDBLite consensus disorder prediction 1 31 - -
Bda01g01928 938 PANTHER OS02G0177800 PROTEIN 7 381 IPR012416 GO:0005516
Bda01g01928 938 Pfam Calmodulin binding protein-like N-terminal domain 394 538 IPR046831 -
Bda01g01928 938 Pfam Calmodulin binding protein-like N-terminal domain 96 243 IPR046831 -
Bda01g01928 938 PANTHER CALMODULIN-BINDING PROTEIN 60 B 7 381 - -
Bda01g01928 938 Pfam Calmodulin binding protein central domain 550 616 IPR046830 -
Bda01g01928 938 Pfam Calmodulin binding protein central domain 255 321 IPR046830 -
Bda01g01928 938 PANTHER OS02G0177800 PROTEIN 395 937 IPR012416 GO:0005516
Bda01g01928 938 Pfam Calmodulin binding protein C-terminal domain 621 683 IPR046829 -
Bda01g01928 938 Pfam Calmodulin binding protein C-terminal domain 326 381 IPR046829 -
Bda01g01928 938 PANTHER CALMODULIN-BINDING PROTEIN 60 B 395 937 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g01928 Bda11g00995 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01928 Bda-Chr1:55536200 Bda01g01966 Bda-Chr1:56055490 1.47E-95 dispersed
Bda01g01928 Bda-Chr1:55536200 Bda11g00995 Bda-Chr11:9724837 0 wgd
Bda01g01928 Bda-Chr1:55536200 Bda11g00073 Bda-Chr11:912901 3.19E-71 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g01928 - - cmo:103494282 840.876