Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g01930 ATGGGAAGTCCTTCAGCAACCCCGCCTTCACCTCCCACCTTCTCTCCCGGACTTAGTCCTGGTTCGACTGATGAGACGCCACGTGTGAAGTTTCTATGTAGTTTTCTAGGAAGTATAATGTCTCGCCCACAAGACGGAAAGCTTCGCTATGTTGGTGGAGAGACTCGAATTGTTAGTGTGTCCAGAGACATTACTTACGAGGAGTTAATGAATAAGATGAAGGAAATTTATGAAGGAGCATCGCTTCTCAAGTATCAGCAACCAGATGAAGATCTTGATGCTCTTGTGTCCATTGTGAATGATGATGATGTAATTAATATGATGGAGGAATATGACAAATTGGGTTCAGGTGATGGATTCACTAAGCTTAGGATGTTTTTATCTTCTCACTCTGATCTAGATGGTTCTTCTGCTTTTATTGATGGAGATGAGAGGGATAATGAGAGAAGATATGTCGATGCTCTTAATAATTTAAACGATGCTACTGATTTTAGGAAACAACTGCTTCCTGATTCTCCTGTGATTGGCCCTCTAGAGGATATATATGGGTCTGACCAGTATTTCAATCCATCAGGTCTTGATGGAAGCTTCCATAGCCAAAGGAATTTCGATCCCTTGTCACAATATAATCTCTGTCACCTTGCAATGCCTCAGCAATCTGTTTCTCAGAGGTATAATGAAATGGAAGCTCCATGGAGTCCTGCTTACTATTCTCCTAGGCATCATGGGCCCCAGGATTCAAGGTCAATGCCTGAATTTCCGTCTTCTCCTTCTTCCATGAGGTATAGAATGCCGTTTGCAGATTTACCTTCTGAAGACTATGTTCTGCAGTCGGTGAACCACCTGCCTACATTTGAACACCAGCCACAATTTTCAGAGAATGTTGTGTGGCTGCAAAATGGAGTTGTAACTTGTGAAAAGTCAGGTTTTCCTGGTAATATTCTTCATAGTCACAGTGTTTTCGATGGGGGCAGTATTTGTGAGCATTGCCGGATGAATTTTCAAAGAAATCAACCCCATTTGGAGCACACCAATGTAGTTAATGGACATGCTCAAGTTGGAAATCCATGCCTTGAATGCATTCCTAGTCGGGAAATTGTCATGGTAAATTCAGATGCAAGAATTTTCTCCAATGATGCGAATAATGATACTCAAAATCACGAGAGAGGATGGATTTTGCAGCATCAGTTGAATATGCGAGTTGACGATCCAAGAGTACATGCATCTGGTGCAGGAAGAATGAATGATCAATATGTAATGGATGGTCCAAATTTGAATTTCCCTATCGGGCAAAATAATTTTATCGATGGTCATTATGTATCCACAAATTTACGACAATGTGCTAGGTCAGAAATGGGAAATGATGTATATAATGATCAAGCAGTTCCTATCACATCACAGTTGCACATTACAACACCAGATGAACAAGTTCGATATGGATATATGCCATACGTATATGGTGGAGACAATCCGCACCCATCAATTTCACATAGTCATGTACCTGGAAATGTTGTGTGGAGAAATATTACAAATCCAATGCATGTTGCTCCTTCTCCCTCTTACGAAGCATCCAATTCTCATCAAGTGAATGGTACAGTTAATTCAGGATATGTGAGGGGTGTAAGAGAAGGCACTGTACAGTTTTGTACTGGCATCGACAATCAAAATCCCTTGCTTGATTCCTCTCAAAACATTGGGTTTCAGGGAACTGGCTGTTCGGAATACTTGTATGAAAAGGCTTTGAGAATCAATACAAACTCTATGTGCCAGGAAAATAACAATTGTCCCGGTCTAGATGATGTTCGATCAACACCCGATAAAAGAAATGTTGAGCAATCAGACTCATCGTCTCTATTGGATAACGATAAATTGGTACTTTCTACTACTCCTATTCTGAATCCACAATCAAATATTGATGCCAATTTAACAGAAAATATGAGGTTGGAGATCTCAAATATCCCAGGAGAAGAGGCAAGTTCTTTAGTAAGAGTTGACAATGGCGATGCCCAGTCTGTTGAATGTTCAGAGCATCACAAATTAGTAGATGATAGCTCCCCAGTGGTACCTTTTGATTTTCCAATATGCTTAAATGAACCAGAAAAGAATGGTGGTGTTAAGAAACCAGTTGGAGAAGATGTTATTGCTACTGAAGAATTGAGTATCTCTGTCAACCATATGAATTTCTTACCTGACTTAATTGCTTCGGTAAAGCAAGTAGCATTAGAAGAAGCTGAAGAGGTCACAACGGAAGTCTCTGAAAGTGCGGCAACAAAGCCTGACTCAGTGGCGAAAGAAGAAATGTCAAATGAGTTAGAAACAACGAATGCCTTAGGAGGGTCAGAGCAGGAAGCTGATAATGACTATTTAAAACCATCGAAAATTGAGCCAACAAAGGCTGAGGCAGAAGCCATTGCCAGGGGATTGCAGACGATTAAAAATGATGATCTGGAGGAGATCCGAGAACTTGGATCTGGGACATATGGGTCTGTTTATCATGGAAAATGGAGAGGTTCTGACGTAGCAATAAAGAGAATTAAAGCCAGTTGCTTTGCTGGGCGACCGTCTGAAAGAGAACGCTTGATTGCAGATTTCTGGAAGGAGGCTTTGATATTAAGTTCTTTACATCACCCAAATGTTGTTTCTTTTTATGGCATTGTCCGTGATGGTCCTGATGGGTCCTTAGCGACTGTAACAGAGTTCATGATAAATGGATCCTTAAAACAGTTTTTGCAGAAGAAGGACAGAACCATTGATCGTCGGAAGAGACTCATCATTGCTATGGATGCTTCATTTGGGATGGAGTATTTGCATGGAAAGAACATTGTACATTTTGATTTGAAATGTGAAAATCTTTTAGTGAACATGAGGGATCCACAAAGACCCGTATGCAAGATTGGCGATTTAGGCTTATCAAAGGTGAGACAGCACACTTTAGTCTCCGGGGGTGTTCGGGGAACTTTACCATGGATGGCTCCCGAGCTTCTTAGTGGAAAAAGTAACATGGTTACTGAAAAGGTGAAGCTACCTATTGATGTGTACTCATTCGGTATTGTCATGTGGGAGGTGCTCACCGGAGATGAACCTTATGCAGATATGCACTGTGCTTCTATAATTGGTGGAATAGTGAACAATTCATTACGACCTCAAATTCCATCTTGGTGTGATCCGGAATGGAAGGCTTTGATGGAAAGTTGCTGGGACTCTGATCCAGCCAAGAGGCCATCATTTTCTGAAATCTCTCAAAAGCTGAGAAATATGGCTGCTGCAATGAACTTGAAATGA 3282 41.07 MGSPSATPPSPPTFSPGLSPGSTDETPRVKFLCSFLGSIMSRPQDGKLRYVGGETRIVSVSRDITYEELMNKMKEIYEGASLLKYQQPDEDLDALVSIVNDDDVINMMEEYDKLGSGDGFTKLRMFLSSHSDLDGSSAFIDGDERDNERRYVDALNNLNDATDFRKQLLPDSPVIGPLEDIYGSDQYFNPSGLDGSFHSQRNFDPLSQYNLCHLAMPQQSVSQRYNEMEAPWSPAYYSPRHHGPQDSRSMPEFPSSPSSMRYRMPFADLPSEDYVLQSVNHLPTFEHQPQFSENVVWLQNGVVTCEKSGFPGNILHSHSVFDGGSICEHCRMNFQRNQPHLEHTNVVNGHAQVGNPCLECIPSREIVMVNSDARIFSNDANNDTQNHERGWILQHQLNMRVDDPRVHASGAGRMNDQYVMDGPNLNFPIGQNNFIDGHYVSTNLRQCARSEMGNDVYNDQAVPITSQLHITTPDEQVRYGYMPYVYGGDNPHPSISHSHVPGNVVWRNITNPMHVAPSPSYEASNSHQVNGTVNSGYVRGVREGTVQFCTGIDNQNPLLDSSQNIGFQGTGCSEYLYEKALRINTNSMCQENNNCPGLDDVRSTPDKRNVEQSDSSSLLDNDKLVLSTTPILNPQSNIDANLTENMRLEISNIPGEEASSLVRVDNGDAQSVECSEHHKLVDDSSPVVPFDFPICLNEPEKNGGVKKPVGEDVIATEELSISVNHMNFLPDLIASVKQVALEEAEEVTTEVSESAATKPDSVAKEEMSNELETTNALGGSEQEADNDYLKPSKIEPTKAEAEAIARGLQTIKNDDLEEIRELGSGTYGSVYHGKWRGSDVAIKRIKASCFAGRPSERERLIADFWKEALILSSLHHPNVVSFYGIVRDGPDGSLATVTEFMINGSLKQFLQKKDRTIDRRKRLIIAMDASFGMEYLHGKNIVHFDLKCENLLVNMRDPQRPVCKIGDLGLSKVRQHTLVSGGVRGTLPWMAPELLSGKSNMVTEKVKLPIDVYSFGIVMWEVLTGDEPYADMHCASIIGGIVNNSLRPQIPSWCDPEWKALMESCWDSDPAKRPSFSEISQKLRNMAAAMNLK 1093
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 55558419 55563260 + Bda032986 Bda01g01930 1930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g01930 1093 SMART serkin_6 816 1089 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g01930 1093 ProSitePatterns Serine/Threonine protein kinases active-site signature. 941 953 IPR008271 GO:0004672|GO:0006468
Bda01g01930 1093 MobiDBLite consensus disorder prediction 592 617 - -
Bda01g01930 1093 Pfam Protein tyrosine and serine/threonine kinase 817 1083 IPR001245 GO:0004672|GO:0006468
Bda01g01930 1093 Gene3D Transferase(Phosphotransferase) domain 1 902 1092 - -
Bda01g01930 1093 CDD STKc_MAP3K-like 822 1083 - -
Bda01g01930 1093 Gene3D - 47 130 - -
Bda01g01930 1093 MobiDBLite consensus disorder prediction 1 25 - -
Bda01g01930 1093 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 20 1093 - -
Bda01g01930 1093 SUPERFAMILY CAD & PB1 domains 45 134 - -
Bda01g01930 1093 SUPERFAMILY Protein kinase-like (PK-like) 808 1081 IPR011009 -
Bda01g01930 1093 ProSiteProfiles Protein kinase domain profile. 816 1086 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g01930 1093 MobiDBLite consensus disorder prediction 748 787 - -
Bda01g01930 1093 CDD PB1_UP2 32 127 - -
Bda01g01930 1093 ProSitePatterns Protein kinases ATP-binding region signature. 822 843 IPR017441 GO:0005524
Bda01g01930 1093 Gene3D Phosphorylase Kinase; domain 1 802 901 - -
Bda01g01930 1093 PANTHER SERINE-THREONINE PROTEIN KINASE 20 1093 - -
Bda01g01930 1093 MobiDBLite consensus disorder prediction 1 16 - -
Bda01g01930 1093 SMART PB1_new 43 128 IPR000270 GO:0005515
Bda01g01930 1093 Pfam PB1 domain 44 127 IPR000270 GO:0005515
Bda01g01930 1093 PRINTS Tyrosine kinase catalytic domain signature 1054 1076 IPR001245 GO:0004672|GO:0006468
Bda01g01930 1093 PRINTS Tyrosine kinase catalytic domain signature 935 953 IPR001245 GO:0004672|GO:0006468
Bda01g01930 1093 PRINTS Tyrosine kinase catalytic domain signature 898 911 IPR001245 GO:0004672|GO:0006468
Bda01g01930 1093 PRINTS Tyrosine kinase catalytic domain signature 1010 1032 IPR001245 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g01930 Bda02g00332 CCT
Bda01g01930 Bda11g00996 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01930 Bda-Chr1:55558419 Bda02g00334 Bda-Chr2:43603977 3.66E-31 dispersed
Bda01g01923 Bda-Chr1:55428825 Bda01g01930 Bda-Chr1:55558419 0 proximal
Bda06g00238 Bda-Chr6:4222295 Bda01g01930 Bda-Chr1:55558419 9.88E-30 transposed
Bda13g00024 Bda-Chr13:450224 Bda01g01930 Bda-Chr1:55558419 1.27E-27 transposed
Bda01g01930 Bda-Chr1:55558419 Bda11g00996 Bda-Chr11:9741100 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69465 PF07714 PK_Tyr_Ser-Thr 3.90E-59 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g01930 - - tcc:18589217 1346.26