Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g01946 ATGTTGATTCTGAAAGAAGGGACTAGGCCACCATGGGTGGGATTGGGAGCTTCAGTTTGGGTGCAAATAGCAGCTGGAAATGCGTACAACTTTCCACTGTATTCTCACTCTTTGAAATCGGTTCTGGGTTTTAATCAACTCCAGCTTACTTTGCTTGGAGTGGCGAATGATATTGGTGAGAACGTGGGTATTCTTCCTGGGTTAGTTTCCAATAAGCTTCCTCCATGGATGGTGCTTTTGATTGGTGCTCTGGCCTGCTTCTTCGGCTATGGTGTGATTTGGCTTTCGTTAAGCCGAACAGTTCAATCTTTGCCTTTTTGGTTGTTATGGGTTGCACTTAGTGTTGCAACCAATAGTAGTGCCTGGTTTACCACTGCTGTGCTCGTAACCAATATGAGAAACTTCCCTCTAAGTCGAGGAATGGTTGCGGCTATTCTCAAAGGCTATGGCGGGCTCAGTGGTGCAGTTTTTACTGAGATCTTCAGCATAATTCTTCAGAACTCCTCTACGAATCTTTTGTTGTTCCTTGCACTTGGAGTTCCGCTTCTCTGTATCAGCATGATGTACTTTGTGAGACCTTGTACTCCAGCTTCCGGCGAAGACCCATCGGAAAAAGGACGTTTTCATTTCGTTCTAGCTGCTAGTGTCGTTCTTGGAATTTTTCTTCTCACAACCACAATTTTAAATGACATTCTTCATTTAAACACTCTTATTTCCTATGTTTTTGTTGGTGTAATGGTTCTGCTTCTCATGGCTCCCCTTACGATCCCTGTAAAGATGACATGGTGTCGTATGCCAGTTGGCACAGAGGAGAAAATTGTCCAGTCAGCTGAGTCTTTGGAGACTCGGATTCAAGAAAATAATGGAGGTGAATTGGAAGAACATCTATTGGTATCTTCATCCTCGAGAGTAAACTTGGAAAGCTCTGCTGAAAGTGAAGATGTATCAGAGGTGGCAATGCTCCTAGCTGAAGGAGAGGGGGCAGTGAAGAAGAAGAGAAGGCCTAAGAGAGGGGAGGATTTTACGTTTACTGAAGCTATAGTCAAGGCTGATTTTTGGCTTCTATTCTTAGTTTACTTTGTCAGTGTAGGCACCGGAGTCACTGCACTTAATAACCTGGCTCAAATTGGGATTGCTCAAGGTGTAAATGATACTACAAGCTTGCTGTCTCTTTTCAGCTTCTGCAATTTTGTGGGACGTCTTAGTGGCGGCGTTGTCTCGGAACACTTTGTCAGGACAAGAACAGTTCCTCGCACAATTTGGATGACACTGACACTGCTAGTAATGATCGTTACCTATCTTTTGTTTGCTTCTGCTATTGATGGTACTCTCTATCCGGCTACTGCTTTACTTGGGATCTGCTATGGTACTCAAATCTCAGTAATGGTTGCAACTGTCTCAGAAATTTTTGGGTTAAAACATTTTGGAGTACTCTATAATGTTATGTCATTAGGGAATCCTCTTGGTGCTTGTCTTTTCTCTGTCCTCCTAGCTGGGTACATTTATGATAATGAAGCATCAAAGCAGCATAAACTCGACCCAACGGGCTCTAATTTATCTTGCTTAGGTGCTAATTGTTTTAGAGTCACCTTCGAGGTTCTGGCTGGCGTCTGTGCTGTCGGTTGTATCTTGAGCATTATTTTAACTAGACGAATAAGGCCAGTCTACCAAATGCTTTACTCTGGTGGTTCTTTTCGGCTGCCTCAGAGTTCAAGTCGTTAA 1722 43.38 MLILKEGTRPPWVGLGASVWVQIAAGNAYNFPLYSHSLKSVLGFNQLQLTLLGVANDIGENVGILPGLVSNKLPPWMVLLIGALACFFGYGVIWLSLSRTVQSLPFWLLWVALSVATNSSAWFTTAVLVTNMRNFPLSRGMVAAILKGYGGLSGAVFTEIFSIILQNSSTNLLLFLALGVPLLCISMMYFVRPCTPASGEDPSEKGRFHFVLAASVVLGIFLLTTTILNDILHLNTLISYVFVGVMVLLLMAPLTIPVKMTWCRMPVGTEEKIVQSAESLETRIQENNGGELEEHLLVSSSSRVNLESSAESEDVSEVAMLLAEGEGAVKKKRRPKRGEDFTFTEAIVKADFWLLFLVYFVSVGTGVTALNNLAQIGIAQGVNDTTSLLSLFSFCNFVGRLSGGVVSEHFVRTRTVPRTIWMTLTLLVMIVTYLLFASAIDGTLYPATALLGICYGTQISVMVATVSEIFGLKHFGVLYNVMSLGNPLGACLFSVLLAGYIYDNEASKQHKLDPTGSNLSCLGANCFRVTFEVLAGVCAVGCILSIILTRRIRPVYQMLYSGGSFRLPQSSSR 573
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 55847066 55850041 - Bda004254.1 Bda01g01946 1946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g01946 573 SUPERFAMILY MFS general substrate transporter 12 195 IPR036259 -
Bda01g01946 573 SUPERFAMILY MFS general substrate transporter 204 554 IPR036259 -
Bda01g01946 573 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 2 572 - -
Bda01g01946 573 Gene3D MFS general substrate transporter like domains 349 554 IPR036259 -
Bda01g01946 573 Pfam Major Facilitator Superfamily 356 551 IPR011701 GO:0022857|GO:0055085
Bda01g01946 573 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 2 572 - -
Bda01g01946 573 CDD MFS_Mch1p_like 10 542 - -
Bda01g01946 573 Pfam Nodulin-like 11 258 IPR010658 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01946 Bda-Chr1:55847066 Bda12g00609 Bda-Chr12:24407476 0 dispersed
Bda01g01944 Bda-Chr1:55822860 Bda01g01946 Bda-Chr1:55847066 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g01946 - - pvy:116105435 826.624