Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda01g01959 | ATGTCCTTAACGATCACCAATGGGATCCGTACAGAGCCAGACTCTTTCATCGTCCCGTTACTGTCTTCTCAAAGATCGGCCACTAACTGTTCCTCTCAGGTTGCCATTGTCGGTGCTAAAGTATGCCCCATTGAGAGCCTCGACTACGAGATTTTTGAGAATGAAATCTTCAAGCAGGATTGGAGGAGCCGTAGGAAGTGGCAGATTTTTGAGTATACATTCATGAAGTGGATTTTGTGCTTCTTGATTGGTCTGATAGTTAGCGTTATTGGTTTCTGTAATAATCTTTCGGTTGAGAATATCGCTGGTGTGAAATTCGTTGTCACCTCCAATATGATGCTTGAGGATAGGTATTGGTTGGCCTTTCTTGTTTTTTCTATTTCCAATTTGGTTCTCACTCTATTTGCAGTAGTGATCACGGCATTGATCTCACCAGCAGCAGCTGGTTCGGGTATACCAGAAGTAAAAGCCTATTTGAATGGTGTAGATGCACCCAGAATTTTTTCAATAAAAACATTAGTAGTTAAGGTAGTAGGCAGCATTTCTGTTTCATCATCATCTTTGCTAGTAGGAAAGGCAGGACCTATGGTGCATACTGGTGCTTGCATTGCTTCTCTCCTAGGTCAGGGAGGGTCAACAAAATATCATTTGACGTGGAGATTTCTTAGATATTTCAAGAACGACAGAGATAGGCGCGATCTTATAACATGCGGAGCAGCTGCTGGAATTGCGGCTGCTTTTCGTGCTCCTGTGGGTGGTTTGCTGTTTGCTTTCGAAGAGATGGTATCTTGGTGGCGAAGTGCTCTTTTATGGCGAGCATTTTTCACGACTGCAGTAGTTGCGATTATATTGCGCTCTTTAATTGACGTGTGCTTTAGTGGAAAATGTGGACTATTTGGTACTGGGGGTCTGATAATGTTTGATGTCTATTCAGAAACTGTTTCATATCACCTACTGGATGTGCCTTCTGTGCTTGTCCTTGGAGTTGTAGGAGGTATACTTGGAAGCCTATTTAATTTCATTTTGGGTAAAGTCCTTCGAATTTACAGTCTCGTGAATGAGAAAGGCTTTGTATACAAGATACTGCTTGCTTGCGCAGTCTCAATTTTCACATCCTGTCTTCTTTTCGGATTACCTTGGCTTGCAACTTGCCAAGCTTGCCCAACTAGCTCGTCAGAAGAGTGTCCTACAATTGGACGATCAGGAAACTACAAGAAGTTTCAATGTCCAGCTCATCACTACAATGATCTTGCAAGTCTTATATTCAACACCAGCGATGACGCAATCAAAAATCTCTTCAGCAAAGATACCGACTCGGAGTTTCAATTCTCGTCAGTTATCATATTTTTCATTACTTGCTATTTCTTAAGCATCATCAGCTATGGAGTTGTTGCTCCAATTGGTCTATTCATCCCTGTTATTGTGACGGGTGCCTCCTATGGACGTTTAATCGGAATGGTACTTGGCTCACACTCAAAGCTTAACCATGGCCTTTTTGCTGTACTGGGTGCGGCTTCATTGCTTGGGGGTACGATGAGAATGACGGTTTCTCTCTCTGTCATCATCCTGGAACTGACCAACAATCTCTTATTGCTTCCTTTGATAATGGTGGTTTCTCTCATCGCCAAAACGGTAGCCGACGCTTTCAATAGTAATATTTACGATCAAATGTTGAAAGCCAAAGGGTTTCCTTATCTCGAAGCCCATGCAGAGCCGTACATGAGGCAGCTGATGGTCAGTGACGTTGTGATGGGCCCGCTTCAAATATTTCAAGGGATTGAGAAAGTGAGTAACATAGTACATGTTCTTAGAATGACAAGACATCATGGTTTTCCTGTCGTTGATGAGCCTCCTTTCTCCCAATCCCCTGTCCTGTTTGGCATCGTTCTTCGAGCCCATTTGATTACATTGTTAAAGAAGAAAGCTTTTATAGCTACAACAGTGCCAGTCGGTATCAGTGCCTATACGCAACTGTCGGCTGGGGATTTTGCGAAAAGAGGCTCGAATAACACCGAGAATATCGAGGATGTGGAGTTGACAGAGGAAGAGATGGAGATGTTCATCGACCTGCATCTGTTCAGTAATGCTTCACCTTATACTGTTGTTGAGACGATGTCGTTAGCAAAGGCGCTCATTCTTTTCCGTCAAGTTGGATTGAGGCATATGCTTGTCGTTCCCAAAGTTTCTGGGAGATCGCCAGTTGTGGGCATACTAACGAGGCACGATTTCATGTCGGAACACATATTGAGCTTGTATCCTTCACTCGTGAGAAGCAGGTGGAAGAGACTGCGAATTAAGATTCCGGACTTTTGGCAATACTTTAAATGA | 2328 | 43.3 | MSLTITNGIRTEPDSFIVPLLSSQRSATNCSSQVAIVGAKVCPIESLDYEIFENEIFKQDWRSRRKWQIFEYTFMKWILCFLIGLIVSVIGFCNNLSVENIAGVKFVVTSNMMLEDRYWLAFLVFSISNLVLTLFAVVITALISPAAAGSGIPEVKAYLNGVDAPRIFSIKTLVVKVVGSISVSSSSLLVGKAGPMVHTGACIASLLGQGGSTKYHLTWRFLRYFKNDRDRRDLITCGAAAGIAAAFRAPVGGLLFAFEEMVSWWRSALLWRAFFTTAVVAIILRSLIDVCFSGKCGLFGTGGLIMFDVYSETVSYHLLDVPSVLVLGVVGGILGSLFNFILGKVLRIYSLVNEKGFVYKILLACAVSIFTSCLLFGLPWLATCQACPTSSSEECPTIGRSGNYKKFQCPAHHYNDLASLIFNTSDDAIKNLFSKDTDSEFQFSSVIIFFITCYFLSIISYGVVAPIGLFIPVIVTGASYGRLIGMVLGSHSKLNHGLFAVLGAASLLGGTMRMTVSLSVIILELTNNLLLLPLIMVVSLIAKTVADAFNSNIYDQMLKAKGFPYLEAHAEPYMRQLMVSDVVMGPLQIFQGIEKVSNIVHVLRMTRHHGFPVVDEPPFSQSPVLFGIVLRAHLITLLKKKAFIATTVPVGISAYTQLSAGDFAKRGSNNTENIEDVELTEEEMEMFIDLHLFSNASPYTVVETMSLAKALILFRQVGLRHMLVVPKVSGRSPVVGILTRHDFMSEHILSLYPSLVRSRWKRLRIKIPDFWQYFK | 775 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 55980276 | 55985010 | - | Bda004272.1 | Bda01g01959 | 1959 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda01g01959 | 775 | Pfam | CBS domain | 697 | 745 | IPR000644 | - | |
Bda01g01959 | 775 | PANTHER | CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER | 19 | 767 | - | - | |
Bda01g01959 | 775 | SUPERFAMILY | CBS-domain pair | 570 | 745 | IPR046342 | - | |
Bda01g01959 | 775 | Gene3D | Clc chloride channel | 68 | 567 | - | - | |
Bda01g01959 | 775 | CDD | CBS_pair_voltage-gated_CLC_euk_bac | 569 | 746 | - | - | |
Bda01g01959 | 775 | SMART | cbs_1 | 586 | 639 | IPR000644 | - | |
Bda01g01959 | 775 | SMART | cbs_1 | 697 | 748 | IPR000644 | - | |
Bda01g01959 | 775 | Gene3D | - | 568 | 746 | IPR046342 | - | |
Bda01g01959 | 775 | PRINTS | Chloride channel signature | 240 | 259 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
Bda01g01959 | 775 | PRINTS | Chloride channel signature | 145 | 162 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
Bda01g01959 | 775 | PRINTS | Chloride channel signature | 465 | 485 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
Bda01g01959 | 775 | PRINTS | Chloride channel signature | 176 | 195 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
Bda01g01959 | 775 | PRINTS | Chloride channel signature | 553 | 567 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
Bda01g01959 | 775 | PRINTS | Chloride channel signature | 497 | 513 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
Bda01g01959 | 775 | PRINTS | Chloride channel signature | 515 | 534 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
Bda01g01959 | 775 | ProSiteProfiles | CBS domain profile. | 693 | 754 | IPR000644 | - | |
Bda01g01959 | 775 | Pfam | Voltage gated chloride channel | 133 | 547 | IPR001807 | GO:0005247|GO:0006821|GO:0016020|GO:0055085 | |
Bda01g01959 | 775 | PRINTS | Plant CLC chloride channel signature | 417 | 433 | IPR002251 | GO:0005247|GO:0006821|GO:0016020 | |
Bda01g01959 | 775 | PRINTS | Plant CLC chloride channel signature | 275 | 285 | IPR002251 | GO:0005247|GO:0006821|GO:0016020 | |
Bda01g01959 | 775 | PRINTS | Plant CLC chloride channel signature | 293 | 300 | IPR002251 | GO:0005247|GO:0006821|GO:0016020 | |
Bda01g01959 | 775 | PRINTS | Plant CLC chloride channel signature | 261 | 269 | IPR002251 | GO:0005247|GO:0006821|GO:0016020 | |
Bda01g01959 | 775 | PRINTS | Plant CLC chloride channel signature | 50 | 58 | IPR002251 | GO:0005247|GO:0006821|GO:0016020 | |
Bda01g01959 | 775 | SUPERFAMILY | Clc chloride channel | 54 | 569 | IPR014743 | - | |
Bda01g01959 | 775 | PANTHER | CHLORIDE CHANNEL PROTEIN | 19 | 767 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda01g01959 | Bda11g00025 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda01g01959 | Bda-Chr1:55980276 | Bda11g00025 | Bda-Chr11:340517 | 0 | dispersed | |
Bda01g01959 | Bda-Chr1:55980276 | Bda11g00061 | Bda-Chr11:731868 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda01g01959 | K05016 | - | jre:108995632 | 1160.98 |