Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g01966 AGGTCATCACCACCCAGAATACGAGAATCAGGAGGCAGAGAACTACAACTTCGTTTCATAACGAAAATGCCAGATCACCTGTTTGCTGGAAAGAAGGTTGAAGGAGAGGGAGGATCGGCAATTTATGTCATGTTGATAGACTTGACCGACAGCAGTGTCGTCAAAACAGGCCCAGAATCAACTGCAAAACTGAACGTCTTGGTGCTCCAAGGCGATTTCGATGAGGATTTTAATGATGGGTGGACACACGAGATCTTCAAAAGTCATCAAGTGAAAGAACGAGATGGAAAAGGCCCAATCCTGATTGGAGACATACAAGTGACGCTTAATGATGGAGTGGGAATTCTTGGTGATCTCTTATTCACGGACAACTCCAGCTGGACTCGAACGAAGAAATTCAGACTTGGTGTTGAGCTGGCCCCAGGATTCTGTGAGGGAACTTGTGTTATGGAAGCTAAAACAGAAGCGTTTGCAGTTTTAGATCAGAGGGGAGAATCTTACAAGAAACATTACCCACCTGCTCTGCAAGATGAAGTTTATAGATTGAAAGGTATAGCTAAGGGTAAACCCCTCCACGAGAAATTAGTCAAAGCTGGAATAATCACTGTTGAAGGTTTACTTCGTCTTCATGCCAAGGATTCGCAAAAGTTAAGAAATATGCTCGGGACCAGCACGACAGACAAAAAGTGGAAGAGTACAATTGAACATGCCATGACTTGTGATTTTTCAGGTGGGAAGTGTTATGTTTTCTATACTGATGGAAGTCAAAGTTCTGGAGTTCTGTTCAATCACATTCATGAGCTTAAAGGCCGTATAATTGATGGGAAAGTTCTACCTTTGGAATCACTTGCACAGACCAAAGAGGTAACCTATCTTGTGAAGAAAGCTTATGACAATTGGAAAGAAGTTATAGAATATGATGATCATGCCCTACAGTCATTCACGACTACAAAGGAAATAGAGACATGTCAGGAAGAAGAAGCCTGTTCTATAAATCACAATGTTACACATACTCCCATAAACCATCAATATTCAACTCCTGAGTCTATCCGGCAAAATCAATCAGATAATATGTCTGAGCAGCCACAATTCGGATTTCCACTTGTTAACACTAATCAAACATATATGGAGGTGCCATTCATCAACTCAGAAAGTTTCGTTGGAAGCTCTATTTATACAACAGGTGAAACTTCCGGAGCTGGATGCTCCAACAGTTTAAAAGACTGGTTGCAGCCAAATAATGGACAAGGATTGGAAAATTTTTCATATGACGAAATGATGGAGAAAGGTTTCTTCGACAGCTCTATGTATATAACGGGTGAAACTTCCGGAGCAGGATGCTCCTATAGTTCAGAAGACAGGTTACCGCCAAATAATAGTCCAAGGATGGGATATGTAGTAGATGATGAAATGGAGAATACTGAATTCAATTTTGGAGTCGGACTTGGAGAAGAAGTGGGATTAGCCGCTATATTCGGCCACTCTAACGAGCCTCATTACTCTTATGATAAGGAAGCCGAGCCTGAGTATGATGAGGCATTCGAGGTTGATCCATTTGCGGTGGAGAATGAAATGAACCGCGGAAAGGCTGTCATTGGATGGCTAAAGATAAAAGTTGCTCTAAGATGGGGAATAATGATGAGGAGGAGAGCTGCAGAGAGGAGAGCTCAACTCACTGAGTTACTCTGA 1689 42.04 RSSPPRIRESGGRELQLRFITKMPDHLFAGKKVEGEGGSAIYVMLIDLTDSSVVKTGPESTAKLNVLVLQGDFDEDFNDGWTHEIFKSHQVKERDGKGPILIGDIQVTLNDGVGILGDLLFTDNSSWTRTKKFRLGVELAPGFCEGTCVMEAKTEAFAVLDQRGESYKKHYPPALQDEVYRLKGIAKGKPLHEKLVKAGIITVEGLLRLHAKDSQKLRNMLGTSTTDKKWKSTIEHAMTCDFSGGKCYVFYTDGSQSSGVLFNHIHELKGRIIDGKVLPLESLAQTKEVTYLVKKAYDNWKEVIEYDDHALQSFTTTKEIETCQEEEACSINHNVTHTPINHQYSTPESIRQNQSDNMSEQPQFGFPLVNTNQTYMEVPFINSESFVGSSIYTTGETSGAGCSNSLKDWLQPNNGQGLENFSYDEMMEKGFFDSSMYITGETSGAGCSYSSEDRLPPNNSPRMGYVVDDEMENTEFNFGVGLGEEVGLAAIFGHSNEPHYSYDKEAEPEYDEAFEVDPFAVENEMNRGKAVIGWLKIKVALRWGIMMRRRAAERRAQLTELL 562
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 56055490 56058292 + Bda004281.1 Bda01g01966 1966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g01966 562 PANTHER CALMODULIN-BINDING PROTEIN 60 E-RELATED 4 557 - -
Bda01g01966 562 Pfam Calmodulin binding protein central domain 175 240 IPR046830 -
Bda01g01966 562 Pfam Calmodulin binding protein C-terminal domain 246 306 IPR046829 -
Bda01g01966 562 Pfam Calmodulin binding protein-like N-terminal domain 15 161 IPR046831 -
Bda01g01966 562 PANTHER OS02G0177800 PROTEIN 4 557 IPR012416 GO:0005516
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g01966 Bda11g00073 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01928 Bda-Chr1:55536200 Bda01g01966 Bda-Chr1:56055490 1.47E-95 dispersed
Bda01g01966 Bda-Chr1:56055490 Bda11g01700 Bda-Chr11:51182739 8.79E-64 dispersed
Bda01g01966 Bda-Chr1:56055490 Bda11g00995 Bda-Chr11:9724837 1.79E-112 wgd
Bda01g01966 Bda-Chr1:56055490 Bda11g00073 Bda-Chr11:912901 4.97E-92 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g01966 - - tcc:18587880 470.7