Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda01g01974 | ATGTGTACCACGGACCAAGAAAATGTTGGCCCAGAATTGAAGAATTTCGACAATAATCCCAGTTATTCTTGCCCTTGGCATTGTGAAGTTTTGAAACCTCAGATGAAGAATGAACCTGCAGCTGATCGGATTTGCGCTGGGAATTCATCGCCGCTGGGAAGCATTTCCGAAGAAACCACGGATTTAGACGGAAAACAGACCCCATTTAGTAATTTCCCGACCCATCGATTGGGAGAGTGGTCAGACATTGGTGGCCGTCCTTATATGGAGGATACTCATATATGCATCACTGACTTGGGTAAGAAGTTCGGCTCTAATTCGCTTGTTGAGGAAGTTGTCTCCTTTTATGGTATTAATTGGCTTGATGATAATCAGGTATTTGATGGTCACGAAGGAAAAGGAGCTGCCCATTTTGTCCGAGATCACTTGCCGAGAGCCATCGTCGAAGATGCTGACTTTCCTTTAGAGCTCGAGAAGGTTGTAACGAGGTCATTCGCGGAGACTGATATTGCATTTGCAAAGAAGTGTTCTATTGACTCTTCATTGTCGTCTGGTACAACTGCTCTAACTGCAATAATATTTGGAAGGTCTTTGTTAGTAGCCAATGCTGGGGATTGTCGAGCCGTATTGTCAAGAAGTGGAAATGCGGTAGAAATGTCAAAAGACCACAGACCTTGCTGCATAAAAGAAAGAACACGAATCGAGGCGTTGGGCGGGTACATAGACGATGGCTATGTAAACGGCCAATTAGGCGTGACGCGAGCATTTGGAGATTGGCACCTCGAAGGGATGAAAGGAACGGGCGAAAAAAGCGGACCGTTAATCGCCGAACCAGAGGTAAAAGTAACAATACTTACGAACGAAGACGAGTTTCTTATAATCGGGAGTGATGGAATATGGGACGTATTCACGAGCCAGAATGCCGTGGATTTTGCTAGGAAGAGACTTCAAGAGCACAATGATGTGAGACTGTGTTGCAAACAAGTGGTGGAAGAGGCCATTAAAAGAGGGGCAGTGGATAATTTGACTGTTGTAATGGTGAGATTTCAGTTGGAGCCACCTTTACAGATGGGGAGCTGTCCTAGAGCGGCAAGAGTGAGGAGAAGCATCTCTGCTGAGGGGCTTCAAAATCTCAAGTGTCTTTTAAAAGAACAGAATCAAGAGGCCTTCTATTCTTAA | 1179 | 45.12 | MCTTDQENVGPELKNFDNNPSYSCPWHCEVLKPQMKNEPAADRICAGNSSPLGSISEETTDLDGKQTPFSNFPTHRLGEWSDIGGRPYMEDTHICITDLGKKFGSNSLVEEVVSFYGINWLDDNQVFDGHEGKGAAHFVRDHLPRAIVEDADFPLELEKVVTRSFAETDIAFAKKCSIDSSLSSGTTALTAIIFGRSLLVANAGDCRAVLSRSGNAVEMSKDHRPCCIKERTRIEALGGYIDDGYVNGQLGVTRAFGDWHLEGMKGTGEKSGPLIAEPEVKVTILTNEDEFLIIGSDGIWDVFTSQNAVDFARKRLQEHNDVRLCCKQVVEEAIKRGAVDNLTVVMVRFQLEPPLQMGSCPRAARVRRSISAEGLQNLKCLLKEQNQEAFYS | 392 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 56115802 | 56117849 | - | Bda004291.1 | Bda01g01974 | 1974 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda01g01974 | 392 | Pfam | Protein phosphatase 2C | 124 | 341 | IPR001932 | - | |
Bda01g01974 | 392 | SUPERFAMILY | PP2C-like | 66 | 349 | IPR036457 | - | |
Bda01g01974 | 392 | ProSiteProfiles | PPM-type phosphatase domain profile. | 76 | 349 | IPR001932 | - | |
Bda01g01974 | 392 | SMART | PP2C_4 | 64 | 347 | IPR001932 | - | |
Bda01g01974 | 392 | CDD | PP2Cc | 78 | 349 | IPR001932 | - | |
Bda01g01974 | 392 | Gene3D | - | 57 | 352 | IPR036457 | - | |
Bda01g01974 | 392 | PANTHER | PROTEIN PHOSPHATASE 2C | 1 | 359 | IPR015655 | GO:0004722|GO:0006470 | |
Bda01g01974 | 392 | PANTHER | PROTEIN PHOSPHATASE 2C 27-RELATED | 1 | 359 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda01g01974 | Bda02g00336 | CCT | |
Bda01g01974 | Bda02g00336 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda01g00986 | Bda-Chr1:43467643 | Bda01g01974 | Bda-Chr1:56115802 | 1.43E-114 | dispersed | |
Bda01g01974 | Bda-Chr1:56115802 | Bda13g01275 | Bda-Chr13:35110645 | 2.56E-110 | dispersed | |
Bda01g01974 | Bda-Chr1:56115802 | Bda02g00336 | Bda-Chr2:43621997 | 2.63E-151 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
15489 | PF00481 | PP2C | 6.40E-65 | CL0238 | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda01g01974 | K14803 | - | jre:108982116 | 513.072 |