Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g01974 ATGTGTACCACGGACCAAGAAAATGTTGGCCCAGAATTGAAGAATTTCGACAATAATCCCAGTTATTCTTGCCCTTGGCATTGTGAAGTTTTGAAACCTCAGATGAAGAATGAACCTGCAGCTGATCGGATTTGCGCTGGGAATTCATCGCCGCTGGGAAGCATTTCCGAAGAAACCACGGATTTAGACGGAAAACAGACCCCATTTAGTAATTTCCCGACCCATCGATTGGGAGAGTGGTCAGACATTGGTGGCCGTCCTTATATGGAGGATACTCATATATGCATCACTGACTTGGGTAAGAAGTTCGGCTCTAATTCGCTTGTTGAGGAAGTTGTCTCCTTTTATGGTATTAATTGGCTTGATGATAATCAGGTATTTGATGGTCACGAAGGAAAAGGAGCTGCCCATTTTGTCCGAGATCACTTGCCGAGAGCCATCGTCGAAGATGCTGACTTTCCTTTAGAGCTCGAGAAGGTTGTAACGAGGTCATTCGCGGAGACTGATATTGCATTTGCAAAGAAGTGTTCTATTGACTCTTCATTGTCGTCTGGTACAACTGCTCTAACTGCAATAATATTTGGAAGGTCTTTGTTAGTAGCCAATGCTGGGGATTGTCGAGCCGTATTGTCAAGAAGTGGAAATGCGGTAGAAATGTCAAAAGACCACAGACCTTGCTGCATAAAAGAAAGAACACGAATCGAGGCGTTGGGCGGGTACATAGACGATGGCTATGTAAACGGCCAATTAGGCGTGACGCGAGCATTTGGAGATTGGCACCTCGAAGGGATGAAAGGAACGGGCGAAAAAAGCGGACCGTTAATCGCCGAACCAGAGGTAAAAGTAACAATACTTACGAACGAAGACGAGTTTCTTATAATCGGGAGTGATGGAATATGGGACGTATTCACGAGCCAGAATGCCGTGGATTTTGCTAGGAAGAGACTTCAAGAGCACAATGATGTGAGACTGTGTTGCAAACAAGTGGTGGAAGAGGCCATTAAAAGAGGGGCAGTGGATAATTTGACTGTTGTAATGGTGAGATTTCAGTTGGAGCCACCTTTACAGATGGGGAGCTGTCCTAGAGCGGCAAGAGTGAGGAGAAGCATCTCTGCTGAGGGGCTTCAAAATCTCAAGTGTCTTTTAAAAGAACAGAATCAAGAGGCCTTCTATTCTTAA 1179 45.12 MCTTDQENVGPELKNFDNNPSYSCPWHCEVLKPQMKNEPAADRICAGNSSPLGSISEETTDLDGKQTPFSNFPTHRLGEWSDIGGRPYMEDTHICITDLGKKFGSNSLVEEVVSFYGINWLDDNQVFDGHEGKGAAHFVRDHLPRAIVEDADFPLELEKVVTRSFAETDIAFAKKCSIDSSLSSGTTALTAIIFGRSLLVANAGDCRAVLSRSGNAVEMSKDHRPCCIKERTRIEALGGYIDDGYVNGQLGVTRAFGDWHLEGMKGTGEKSGPLIAEPEVKVTILTNEDEFLIIGSDGIWDVFTSQNAVDFARKRLQEHNDVRLCCKQVVEEAIKRGAVDNLTVVMVRFQLEPPLQMGSCPRAARVRRSISAEGLQNLKCLLKEQNQEAFYS 392
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 56115802 56117849 - Bda004291.1 Bda01g01974 1974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g01974 392 Pfam Protein phosphatase 2C 124 341 IPR001932 -
Bda01g01974 392 SUPERFAMILY PP2C-like 66 349 IPR036457 -
Bda01g01974 392 ProSiteProfiles PPM-type phosphatase domain profile. 76 349 IPR001932 -
Bda01g01974 392 SMART PP2C_4 64 347 IPR001932 -
Bda01g01974 392 CDD PP2Cc 78 349 IPR001932 -
Bda01g01974 392 Gene3D - 57 352 IPR036457 -
Bda01g01974 392 PANTHER PROTEIN PHOSPHATASE 2C 1 359 IPR015655 GO:0004722|GO:0006470
Bda01g01974 392 PANTHER PROTEIN PHOSPHATASE 2C 27-RELATED 1 359 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g01974 Bda02g00336 CCT
Bda01g01974 Bda02g00336 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00986 Bda-Chr1:43467643 Bda01g01974 Bda-Chr1:56115802 1.43E-114 dispersed
Bda01g01974 Bda-Chr1:56115802 Bda13g01275 Bda-Chr13:35110645 2.56E-110 dispersed
Bda01g01974 Bda-Chr1:56115802 Bda02g00336 Bda-Chr2:43621997 2.63E-151 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
15489 PF00481 PP2C 6.40E-65 CL0238 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g01974 K14803 - jre:108982116 513.072