Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bda01g01982 | ATGGGAAAAGAAGTCCTTAACAAGAATCAACAGCAGCAGCTGCCACAGCAAACGTCGTACACGGTGGAGCAGATGGTTGCCGTGAATCCCTACAACCCCGACATTCTTTCTGATCTCGAAAACTACGTTAACGAGCAGGTTGCATCTCAATCATACAGTCTGGACGCTAATCTATGCCTTCTTCGCCTATATCAGTTTGAGCCGGAGCGAATGAGTACCCAGATAGTTGCACGCATTCTTGTTAAGGCCTTGATGGCGATGCCAGCTCCTGATTTCAGTCTTTGCCTCTTTTTGATTCCTGAAAGAGTGCAAATGGAAGAGCAGTTCAAGATTCTGATTGTTCTTTCACACTACTTGGAGACTGGACGGTTTCAACAATTCTGGGATGAAGCTGCTAAGAGCCGGAATATATTGGAAGCTGTGCCCGGTTTCGAGCAAGCCATCCAAGCCTATGCAATTCACGTACTTTCCTTGACCTATCAAAAGATCCCTAGGCCTGTACTTGCTGAGGCAATGAATATCGAGGGTCTATCTTTAGACAAATTCCTTGATCACCAGGTGGCAAACTGTGGTTGGAATCTCGAAAAAAGTCAAGGGAAGAGCCAACTCATTAACTTACCTCGCAACGAATACAACCATCCTGAACTGAAGAAGAACTCTGAAGATAACATCCAATTAGAACTCGTCACCCGAATTTTCCCAATTCTCAGCTGA | 714 | 45.24 | MGKEVLNKNQQQQLPQQTSYTVEQMVAVNPYNPDILSDLENYVNEQVASQSYSLDANLCLLRLYQFEPERMSTQIVARILVKALMAMPAPDFSLCLFLIPERVQMEEQFKILIVLSHYLETGRFQQFWDEAAKSRNILEAVPGFEQAIQAYAIHVLSLTYQKIPRPVLAEAMNIEGLSLDKFLDHQVANCGWNLEKSQGKSQLINLPRNEYNHPELKKNSEDNIQLELVTRIFPILS | 237 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 56192554 | 56194614 | - | Bda004299.1 | Bda01g01982 | 1982 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bda01g01982 | 237 | SUPERFAMILY | ARM repeat | 15 | 140 | IPR016024 | - | |
| Bda01g01982 | 237 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT K | 16 | 236 | - | - | |
| Bda01g01982 | 237 | Gene3D | - | 133 | 235 | IPR036388 | - | |
| Bda01g01982 | 237 | Gene3D | ARM repeat; domain 1 | 12 | 130 | IPR016020 | GO:0003743|GO:0005852|GO:0006446|GO:0043022 | |
| Bda01g01982 | 237 | ProSiteProfiles | PCI domain profile. | 52 | 237 | IPR000717 | - | |
| Bda01g01982 | 237 | SUPERFAMILY | Winged helix DNA-binding domain | 142 | 234 | IPR036390 | - | |
| Bda01g01982 | 237 | Hamap | Eukaryotic translation initiation factor 3 subunit K [EIF3K]. | 13 | 237 | IPR009374 | GO:0003743|GO:0005737|GO:0005852 | |
| Bda01g01982 | 237 | Pfam | CSN8/PSMD8/EIF3K family | 72 | 198 | IPR033464 | - | |
| Bda01g01982 | 237 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 11 | 16 | 236 | IPR009374 | GO:0003743|GO:0005737|GO:0005852 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bda01g01982 | K15028 | - | qsu:112019837 | 395.201 |