Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g01985 ATGGATGAAAACGGGGGCAACAAGTTGAGGGGAATAAGGCAGATCGTGAGGCTCAAGGAACTCCTGCAAAAATGGCAGTCTGTGACGCTTGGTTCAAAGCCAAACTCTCCGACCAATGAAAACCAAGTAGGCTCCATTTCTCATCCCTCCATTAACAAAAGGCTCACGACTGTGGTATGTTGTGATTTAGACGAGGACAGCTGCCAGAGCCCTGAGCATTCACACTCAGACATCCCCAAAGGATATTTGGCTGTTTATGTTGGGCCGGAGCTCCGGAGATTTATCATCCCCACCACCTATCTTAGCCATTCTCTCTTCAAGGTGTTGCTTGAAAAGGTCGAGGAGGAGTTCGGATTTAATCACACCGGCGGCCTGACCATCCCTTGTGATATCGAGATCTTCAAGTATCTTCTGAAATGCATGGAAAACCATCACAATTCTCTTACCGATCAAACTGACTACACAAATCCAGGTATGCCTCTTTCAATTGCTTACTTCTGTGGATCTTCTGCATCTATTCGATCTTACTGA 531 46.33 MDENGGNKLRGIRQIVRLKELLQKWQSVTLGSKPNSPTNENQVGSISHPSINKRLTTVVCCDLDEDSCQSPEHSHSDIPKGYLAVYVGPELRRFIIPTTYLSHSLFKVLLEKVEEEFGFNHTGGLTIPCDIEIFKYLLKCMENHHNSLTDQTDYTNPGMPLSIAYFCGSSASIRSY 176
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
1 56217982 56218512 - Bda004303.1 Bda01g01985 1985
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bda01g01985 176 PANTHER AUXIN-INDUCED PROTEIN 15A 7 146 - -
Bda01g01985 176 Pfam Auxin responsive protein 59 140 IPR003676 GO:0009733
Bda01g01985 176 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 7 146 IPR003676 GO:0009733
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00364 Bda-Chr1:29528743 Bda01g01985 Bda-Chr1:56217982 5.64E-18 dispersed
Bda01g01985 Bda-Chr1:56217982 Bda11g00888 Bda-Chr11:8712257 1.18E-21 dispersed
Bda01g01984 Bda-Chr1:56214751 Bda01g01985 Bda-Chr1:56217982 1.33E-07 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g01985 K14488 - cpap:110808074 218.394