Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bda01g01985 | ATGGATGAAAACGGGGGCAACAAGTTGAGGGGAATAAGGCAGATCGTGAGGCTCAAGGAACTCCTGCAAAAATGGCAGTCTGTGACGCTTGGTTCAAAGCCAAACTCTCCGACCAATGAAAACCAAGTAGGCTCCATTTCTCATCCCTCCATTAACAAAAGGCTCACGACTGTGGTATGTTGTGATTTAGACGAGGACAGCTGCCAGAGCCCTGAGCATTCACACTCAGACATCCCCAAAGGATATTTGGCTGTTTATGTTGGGCCGGAGCTCCGGAGATTTATCATCCCCACCACCTATCTTAGCCATTCTCTCTTCAAGGTGTTGCTTGAAAAGGTCGAGGAGGAGTTCGGATTTAATCACACCGGCGGCCTGACCATCCCTTGTGATATCGAGATCTTCAAGTATCTTCTGAAATGCATGGAAAACCATCACAATTCTCTTACCGATCAAACTGACTACACAAATCCAGGTATGCCTCTTTCAATTGCTTACTTCTGTGGATCTTCTGCATCTATTCGATCTTACTGA | 531 | 46.33 | MDENGGNKLRGIRQIVRLKELLQKWQSVTLGSKPNSPTNENQVGSISHPSINKRLTTVVCCDLDEDSCQSPEHSHSDIPKGYLAVYVGPELRRFIIPTTYLSHSLFKVLLEKVEEEFGFNHTGGLTIPCDIEIFKYLLKCMENHHNSLTDQTDYTNPGMPLSIAYFCGSSASIRSY | 176 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 56217982 | 56218512 | - | Bda004303.1 | Bda01g01985 | 1985 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bda01g01985 | 176 | PANTHER | AUXIN-INDUCED PROTEIN 15A | 7 | 146 | - | - | |
| Bda01g01985 | 176 | Pfam | Auxin responsive protein | 59 | 140 | IPR003676 | GO:0009733 | |
| Bda01g01985 | 176 | PANTHER | AUXIN-INDUCED PROTEIN-LIKE-RELATED | 7 | 146 | IPR003676 | GO:0009733 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bda01g00364 | Bda-Chr1:29528743 | Bda01g01985 | Bda-Chr1:56217982 | 5.64E-18 | dispersed | |
| Bda01g01985 | Bda-Chr1:56217982 | Bda11g00888 | Bda-Chr11:8712257 | 1.18E-21 | dispersed | |
| Bda01g01984 | Bda-Chr1:56214751 | Bda01g01985 | Bda-Chr1:56217982 | 1.33E-07 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bda01g01985 | K14488 | - | cpap:110808074 | 218.394 |