Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g01993 ATGGCCAGGATCCTCTGGATTGTCTCTCTTTCGCTTTTTCTGCCATTTGTTGTGGCTAAGAAAACTTACATTGTGCAGACAGATCACAGTTCAAAGCCATCTTCGTTCAAAACCCACCATGACTGGTACTCTGCTCACCTTATGTCCATTTCCTCATCCTCCGATTCACTGCTTTACACCTACAGTACAGCCTACCATGGTTTTGCTGCTGCCCTAGAACCCCAAGAAGCAGAAGCCCTCCGGAAGATTCGTTCAGTTCTGGGTGTCTTCGAAGACACCGTTTACACCCTCCACACCACTCGTACACCTGAATTTCTCGGCCTAGACACGAACTTTGGATTCTCTGAAGGTCACAATAATGGAGAATTTGATAAATATTATGATGTTATCATTGGAGTTCTCGATACAGGGGTCTGGCCGGAGTCAAAGAGCTTTGACGATTCAGGAATAGAAGACATTCCGGTCAGGTGGCGAGGGGAGTGCGAATTGACACCTGATTTTAACCGTTCCCTCTGCAACAAGAAGCTAATTGGAGCCCGGAGCTTTTCAAGGGGCTACAGAATAGCGTCTGGCGGAGGTTTTACAAAAAAACAGGGAGATATATATTCACCTCGAGACAGAGATGGCCATGGGACGCATACGGCTAGCACTGCGGCTGGTTCGCTCGTGGCGAACGCGAGCTTACGAGGATATGCGAGGGGGACTGCTCGTGGGATGGCGACAATGGCTCGTCTTTCTATTTATAAGGTGTGTTGGCCCGACGGATGTTTTGGTTCTGATATTCTCGCCGGAATAGAAAGAGCCATCGAAGACGGCGTTGATATTCTCTCGCTCTCGTTAGGAGGTGGGTCTGCGCCATACTACCAAGACACCATAGCCATCGGAGCATTCTCGGCTATGGAGAAAGGTATTTTCGTCTCCTGCTCCGCCGGAAACAGTGGGCCAAATAGAGCGTCGCTGGCCAATGTAGCGCCGTGGATCATGACCGTCGGGGCGGGGACATTGGACCGGGACTTTCCGGCTTATGTTCGTCTTGGAAACCATCTCCGGTTCACCGGCGTTTCGTTATACAGTGGGAAAGGGATGGGGTTTGAACCGGTTGAACTTTTTTACGGTTCGGGTTCTAATAACGGCTCGAGCAACATGTGCTTGCCCGGTTCGCTGGAACCGAGAAAGGTCCGTGGTAAGGTAGTGGTTTGTGAGAGGGGGATAAACGCACGAGTGGAAAAGGGTGGGGTTGTGCGGGACGCCGGAGGAGTGGGGATGATACTGGCGAACACGGCGTTGAACGGTGAGGAATTAGTGGCGGACAGCCACTTACTACCGGCTGTTGCCGTGGGGAGGAAAGTGGGGAATCGAATCAGAAAGTATGCGCTCTCTGATCTTAAACCCACGGCAGTTTTGAGCTTTGGGGGGACGGTATTGAACGTCCGTCCGTCGCCGGTTGTGGCGGCATTTAGTTCGAGAGGGCCAAACACGGTGACCCCACAAATCCTCAAACCGGATGTTATCGGTCCTGGAGTCAATATCTTAGCTGCATGGTCGGAGGCGATCGGCCCCAGTGGTCTTGCCGGAGATCTGAGGAAGACTCTCTTTAACATAATGTCGGGTACTTCAATGTCATGTCCACACATCAGCGGTTTAGCGGCGTTACTCAAAGGGGCTCACCCAGATTGGAGTCCAAGCGCCATTAAATCGGCGCTGATGACGACCGCCTACACCAGAGACAACACCGGTCACCATCTCCGGGACGCAGCAGCCGGAGCTTCCCATTCCAACCCATTAGCTCAAGGGTCTGGTCACGTAGACCCGCACAAAGCCCTCTCTCCCGGCCTCGTCTACGACATTTCCCCCCGCGACTACACTGTCTTCCTCTGCTCCTTAAACTACTCCTCCAACCAGCTTCGCCTCATCGTGAAACGCTCCAACATTTCCTGCTCCCGAAAATTCTCCGATCCCGGCCAGCTCAATTACCCATCGTTTTCTGTCGTGTTCGGGGAACAGAGGGTCTTCAGATACACCCGAGTAGTGAAAAATGTCGGGGAGGGAAGTACGGTCTACGAGGTGGCCGTCAAAGCTCCGGCGACGGTGAGCGTTACAGTGCATCCGGCGAAGCTTGCATTTAGTAAAGTGGGCGAGAAGAAGAGTTACACAGTAACGTTTGTAGCGGCGGCGGCGAGCTACGGCGGCGAGAGATTCCGTTACGGGTCAATCGAGTGGAGCAATGGGCACCACAAAGTCAGGAGCCCCATCGCATTTTCTTGGAGGCGCCATTAA 2277 52.88 MARILWIVSLSLFLPFVVAKKTYIVQTDHSSKPSSFKTHHDWYSAHLMSISSSSDSLLYTYSTAYHGFAAALEPQEAEALRKIRSVLGVFEDTVYTLHTTRTPEFLGLDTNFGFSEGHNNGEFDKYYDVIIGVLDTGVWPESKSFDDSGIEDIPVRWRGECELTPDFNRSLCNKKLIGARSFSRGYRIASGGGFTKKQGDIYSPRDRDGHGTHTASTAAGSLVANASLRGYARGTARGMATMARLSIYKVCWPDGCFGSDILAGIERAIEDGVDILSLSLGGGSAPYYQDTIAIGAFSAMEKGIFVSCSAGNSGPNRASLANVAPWIMTVGAGTLDRDFPAYVRLGNHLRFTGVSLYSGKGMGFEPVELFYGSGSNNGSSNMCLPGSLEPRKVRGKVVVCERGINARVEKGGVVRDAGGVGMILANTALNGEELVADSHLLPAVAVGRKVGNRIRKYALSDLKPTAVLSFGGTVLNVRPSPVVAAFSSRGPNTVTPQILKPDVIGPGVNILAAWSEAIGPSGLAGDLRKTLFNIMSGTSMSCPHISGLAALLKGAHPDWSPSAIKSALMTTAYTRDNTGHHLRDAAAGASHSNPLAQGSGHVDPHKALSPGLVYDISPRDYTVFLCSLNYSSNQLRLIVKRSNISCSRKFSDPGQLNYPSFSVVFGEQRVFRYTRVVKNVGEGSTVYEVAVKAPATVSVTVHPAKLAFSKVGEKKSYTVTFVAAAASYGGERFRYGSIEWSNGHHKVRSPIAFSWRRH 758
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 56279235 56281511 - Bda004312.1 Bda01g01993 1993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g01993 758 ProSiteProfiles Serine proteases, subtilase domain profile. 94 608 - -
Bda01g01993 758 Gene3D - 336 475 - -
Bda01g01993 758 SUPERFAMILY Protease propeptides/inhibitors 21 97 - -
Bda01g01993 758 CDD Peptidases_S8_3 95 573 IPR034197 -
Bda01g01993 758 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 98 IPR037045 -
Bda01g01993 758 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 13 755 IPR045051 -
Bda01g01993 758 CDD PA_subtilisin_like 342 466 - -
Bda01g01993 758 Pfam PA domain 383 454 IPR003137 -
Bda01g01993 758 PANTHER - 13 755 - -
Bda01g01993 758 Pfam Subtilase family 128 583 IPR000209 GO:0006508|GO:0008236
Bda01g01993 758 Pfam Peptidase inhibitor I9 22 98 IPR010259 -
Bda01g01993 758 ProSitePatterns Serine proteases, subtilase family, serine active site. 537 547 IPR023828 -
Bda01g01993 758 PRINTS Subtilisin serine protease family (S8) signature 536 552 IPR015500 -
Bda01g01993 758 PRINTS Subtilisin serine protease family (S8) signature 206 219 IPR015500 -
Bda01g01993 758 PRINTS Subtilisin serine protease family (S8) signature 126 145 IPR015500 -
Bda01g01993 758 Gene3D - 625 755 - -
Bda01g01993 758 SUPERFAMILY Subtilisin-like 97 612 IPR036852 GO:0004252|GO:0006508
Bda01g01993 758 Gene3D Peptidase S8/S53 domain 128 621 IPR036852 GO:0004252|GO:0006508
Bda01g01993 758 Pfam Fibronectin type-III domain 655 752 IPR041469 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01993 Bda-Chr1:56279235 Bda02g00365 Bda-Chr2:44053097 0 dispersed
Bda01g01993 Bda-Chr1:56279235 Bda02g00348 Bda-Chr2:43818577 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g01993 - - csv:101209781 1102.04