Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g02021 ATGGGGAAGAAGAGAGAAGAGGGAGATTTGGGACTACTCCTTGATGGTGTGATAGAGGGTATGCCTCTATATGTTAAGGAGCTCGTCGCCGGAGGAGTTGCTGGTGGTATTGCGAAGACGGCCGTTGCTCCGCTTGAGCGCATCAAAATTTTGTTTCAGACAAGAAGAGACGAGTTTCAGAGCATGGGAGTGTTAAAATCCATTAAATGGATCAAAAAGACAGAAGGATATCCAGGGTTCTACCGAGGGAATGGAGCAAGTATAGCTCGAATTGTTCCTTATGCAGCTCTTCACTACATGGTTTATGAGCAATACAGAAGATGGATCATCCTCACTTTTCCGAATGTCAATCGAGGCCCCGTCCTCGATCTTGTGGCGGGATCATTTTCTGGGGCAACCGCCGTTCTTTTCACTCATCCTCTAGATTTAGTCCGGACGAGATTGGCTTACCAGATTGTGGATCCGTCGAAGTTGAGCATTCAATGTGTGGTTAATTCCGACCAAGTTTATAAAGGAATTCTCGATTGTTTCTCGAAGACCTTTAAGAAGGCAGGAATCCGAGGTCTCTACCGCGGAGTGGCCCCATCGCTTTATGGAATCTTCCCGTATGCGGGTTTGAAGTTTTATTTCTACGAGAAGATGAAATTATACGTCCCTGAGAATAAGAAGAATGATATAACGTTCAAACTCGTTTGTGGATCGGTTGCTGGCTTACTAAGCCAAACATTTACTTACCCACTTGATGTTGTTAGGCGACAAATGCAGGTTCAACAGGTTTTGTTGTCAAATAAGGCTGAGGTGAAAGGTACTTTCGAAACAGTCGCTTTGATTGCTCAATCGCAAGGATGGAAGCCATTATTCTCAGGGTTAAGCATCAACTATCTCAAGGTTGTACCTTCCGTAGCAATTGGATTTACAGTCTATGATGTTATGAAATCGTACCTCAGAGTTCCATCTAGGGATGAAGCTGTGATAGAAGTTGCAACAAGTAAAAGAAATACACATAACCAGACATCTTCCATTAGCCAATAA 1032 43.7 MGKKREEGDLGLLLDGVIEGMPLYVKELVAGGVAGGIAKTAVAPLERIKILFQTRRDEFQSMGVLKSIKWIKKTEGYPGFYRGNGASIARIVPYAALHYMVYEQYRRWIILTFPNVNRGPVLDLVAGSFSGATAVLFTHPLDLVRTRLAYQIVDPSKLSIQCVVNSDQVYKGILDCFSKTFKKAGIRGLYRGVAPSLYGIFPYAGLKFYFYEKMKLYVPENKKNDITFKLVCGSVAGLLSQTFTYPLDVVRRQMQVQQVLLSNKAEVKGTFETVALIAQSQGWKPLFSGLSINYLKVVPSVAIGFTVYDVMKSYLRVPSRDEAVIEVATSKRNTHNQTSSISQ 343
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 56536860 56538522 - Bda004343.1 Bda01g02021 2021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g02021 343 Gene3D Mitochondrial carrier domain 23 317 IPR023395 -
Bda01g02021 343 ProSiteProfiles Solute carrier (Solcar) repeat profile. 22 108 IPR018108 -
Bda01g02021 343 ProSiteProfiles Solute carrier (Solcar) repeat profile. 118 217 IPR018108 -
Bda01g02021 343 SUPERFAMILY Mitochondrial carrier 24 310 IPR023395 -
Bda01g02021 343 PANTHER SOLUTE CARRIER FAMILY 25 17 324 - -
Bda01g02021 343 PANTHER GRAVES DISEASE MITOCHONDRIAL SOLUTE CARRIER PROTEIN-LIKE 17 324 - -
Bda01g02021 343 ProSiteProfiles Solute carrier (Solcar) repeat profile. 224 314 IPR018108 -
Bda01g02021 343 PRINTS Mitochondrial carrier protein signature 190 208 IPR002067 GO:0055085
Bda01g02021 343 PRINTS Mitochondrial carrier protein signature 40 54 IPR002067 GO:0055085
Bda01g02021 343 PRINTS Mitochondrial carrier protein signature 83 103 IPR002067 GO:0055085
Bda01g02021 343 PRINTS Mitochondrial carrier protein signature 27 40 IPR002067 GO:0055085
Bda01g02021 343 PRINTS Mitochondrial carrier protein signature 233 255 IPR002067 GO:0055085
Bda01g02021 343 PRINTS Mitochondrial carrier protein signature 133 151 IPR002067 GO:0055085
Bda01g02021 343 PRINTS Graves disease carrier protein signature 221 240 IPR002167 GO:0005743
Bda01g02021 343 PRINTS Graves disease carrier protein signature 19 39 IPR002167 GO:0005743
Bda01g02021 343 PRINTS Graves disease carrier protein signature 277 297 IPR002167 GO:0005743
Bda01g02021 343 PRINTS Graves disease carrier protein signature 44 64 IPR002167 GO:0005743
Bda01g02021 343 Pfam Mitochondrial carrier protein 229 315 IPR018108 -
Bda01g02021 343 Pfam Mitochondrial carrier protein 120 219 IPR018108 -
Bda01g02021 343 Pfam Mitochondrial carrier protein 24 109 IPR018108 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g02021 Bda11g00163 CCT
Bda01g02021 Bda11g00163 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g02021 Bda-Chr1:56536860 Bda11g00222 Bda-Chr11:2727681 8.10E-60 dispersed
Bda01g02021 Bda-Chr1:56536860 Bda13g01598 Bda-Chr13:39523926 4.94E-119 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g02021 - - csv:101207889 513.457