Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda01g02034 | ATGAGGATCGAGTATTTGGAGGACCAGGCGTCTGACGGGGACGATGAAGTTTTTGATACTCAAATTGCCAAGGCTGATGCTAAGAGAGCTTTAGTTGGAGCGGGAGCGAGGATCCTGTTTTATCCGACTCTTTTGTATAATGTGGTTCGGAATAAGATTGAATCTGAATTCAGATGGTGGGATGAAGTTGATCAGTTTCTTCTTTTAGGTGCTGTTCCCTTTCCTAAAGATGTTCCTCGGCTGAAGCAGCTGGGTGTTGGTGGCGTCATCACTCTGAACGAATCTTATGAAACTCTCGTTCCATCATCCTTGTATCATAGCCATGGTATTGACCATTTAACGATTCCGACAAGAGATTATTGTTTTGCTCCTAAATTTGCAGATATAAGCCGAGCAGTTGACTTTATTCATAAAAATGCATCTTGTGGGAAAACCACATACGTTCATTGCAAAGCAGGAAGAGGGAGGAGCACGACTATTGTCCTCTGCTATTTGGTTAAGTATAAAGACATGACACCTGTCGGGGCCTTAGATTATGTTCGATCGAGGAGGCCTCGTGTTTTGTTGGCACCCTCGCAATGGGAGGTAGGAAAATCTTTTTTTCAAGAATATAGCAATCGCCTCCCCCCAACAGGCGCATACTCTCCCTCGAGAGATGCAGTTCTCGTCACAAAAGCTGACCTCGACGGCTATTATGCAAATGGCACTGACGTTTCTAGTAAAGAGTTGGCACTTGTCCCTATCGTGGCAAAAACTAAACCAATGATAGCCAAGCTGTCTTGTCTTTTTGCATCCTTGAAAGTTAATGGGAGCGGCTCAGTCGCAAGACGGATGCCTGTGTCGGAAGCTCGAGCTTGCTGA | 861 | 45.18 | MRIEYLEDQASDGDDEVFDTQIAKADAKRALVGAGARILFYPTLLYNVVRNKIESEFRWWDEVDQFLLLGAVPFPKDVPRLKQLGVGGVITLNESYETLVPSSLYHSHGIDHLTIPTRDYCFAPKFADISRAVDFIHKNASCGKTTYVHCKAGRGRSTTIVLCYLVKYKDMTPVGALDYVRSRRPRVLLAPSQWEVGKSFFQEYSNRLPPTGAYSPSRDAVLVTKADLDGYYANGTDVSSKELALVPIVAKTKPMIAKLSCLFASLKVNGSGSVARRMPVSEARAC | 286 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 56631957 | 56634031 | - | Bda004356.1 | Bda01g02034 | 2034 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda01g02034 | 286 | CDD | PTPMT1 | 59 | 203 | IPR044596 | GO:0004721 | |
Bda01g02034 | 286 | ProSiteProfiles | Dual specificity protein phosphatase domain profile. | 59 | 206 | IPR020422 | GO:0006470|GO:0008138 | |
Bda01g02034 | 286 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 127 | 195 | IPR000387 | GO:0016311|GO:0016791 | |
Bda01g02034 | 286 | Gene3D | Protein tyrosine phosphatase superfamily | 59 | 207 | IPR029021 | - | |
Bda01g02034 | 286 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 52 | 204 | IPR029021 | - | |
Bda01g02034 | 286 | Pfam | Dual specificity phosphatase, catalytic domain | 81 | 194 | IPR000340 | GO:0008138|GO:0016311 | |
Bda01g02034 | 286 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 148 | 158 | IPR016130 | GO:0016311|GO:0016791 | |
Bda01g02034 | 286 | SMART | dsp_5 | 62 | 203 | IPR020422 | GO:0006470|GO:0008138 | |
Bda01g02034 | 286 | PANTHER | OS01G0739200 PROTEIN | 14 | 286 | - | - | |
Bda01g02034 | 286 | PANTHER | - | 14 | 286 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda01g02034 | Bda-Chr1:56631957 | Bda07g00455 | Bda-Chr7:5872294 | 2.28E-99 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda01g02034 | - | - | mnt:21390393 | 436.032 |