Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g02034 ATGAGGATCGAGTATTTGGAGGACCAGGCGTCTGACGGGGACGATGAAGTTTTTGATACTCAAATTGCCAAGGCTGATGCTAAGAGAGCTTTAGTTGGAGCGGGAGCGAGGATCCTGTTTTATCCGACTCTTTTGTATAATGTGGTTCGGAATAAGATTGAATCTGAATTCAGATGGTGGGATGAAGTTGATCAGTTTCTTCTTTTAGGTGCTGTTCCCTTTCCTAAAGATGTTCCTCGGCTGAAGCAGCTGGGTGTTGGTGGCGTCATCACTCTGAACGAATCTTATGAAACTCTCGTTCCATCATCCTTGTATCATAGCCATGGTATTGACCATTTAACGATTCCGACAAGAGATTATTGTTTTGCTCCTAAATTTGCAGATATAAGCCGAGCAGTTGACTTTATTCATAAAAATGCATCTTGTGGGAAAACCACATACGTTCATTGCAAAGCAGGAAGAGGGAGGAGCACGACTATTGTCCTCTGCTATTTGGTTAAGTATAAAGACATGACACCTGTCGGGGCCTTAGATTATGTTCGATCGAGGAGGCCTCGTGTTTTGTTGGCACCCTCGCAATGGGAGGTAGGAAAATCTTTTTTTCAAGAATATAGCAATCGCCTCCCCCCAACAGGCGCATACTCTCCCTCGAGAGATGCAGTTCTCGTCACAAAAGCTGACCTCGACGGCTATTATGCAAATGGCACTGACGTTTCTAGTAAAGAGTTGGCACTTGTCCCTATCGTGGCAAAAACTAAACCAATGATAGCCAAGCTGTCTTGTCTTTTTGCATCCTTGAAAGTTAATGGGAGCGGCTCAGTCGCAAGACGGATGCCTGTGTCGGAAGCTCGAGCTTGCTGA 861 45.18 MRIEYLEDQASDGDDEVFDTQIAKADAKRALVGAGARILFYPTLLYNVVRNKIESEFRWWDEVDQFLLLGAVPFPKDVPRLKQLGVGGVITLNESYETLVPSSLYHSHGIDHLTIPTRDYCFAPKFADISRAVDFIHKNASCGKTTYVHCKAGRGRSTTIVLCYLVKYKDMTPVGALDYVRSRRPRVLLAPSQWEVGKSFFQEYSNRLPPTGAYSPSRDAVLVTKADLDGYYANGTDVSSKELALVPIVAKTKPMIAKLSCLFASLKVNGSGSVARRMPVSEARAC 286
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 56631957 56634031 - Bda004356.1 Bda01g02034 2034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g02034 286 CDD PTPMT1 59 203 IPR044596 GO:0004721
Bda01g02034 286 ProSiteProfiles Dual specificity protein phosphatase domain profile. 59 206 IPR020422 GO:0006470|GO:0008138
Bda01g02034 286 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 127 195 IPR000387 GO:0016311|GO:0016791
Bda01g02034 286 Gene3D Protein tyrosine phosphatase superfamily 59 207 IPR029021 -
Bda01g02034 286 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 52 204 IPR029021 -
Bda01g02034 286 Pfam Dual specificity phosphatase, catalytic domain 81 194 IPR000340 GO:0008138|GO:0016311
Bda01g02034 286 ProSitePatterns Tyrosine specific protein phosphatases active site. 148 158 IPR016130 GO:0016311|GO:0016791
Bda01g02034 286 SMART dsp_5 62 203 IPR020422 GO:0006470|GO:0008138
Bda01g02034 286 PANTHER OS01G0739200 PROTEIN 14 286 - -
Bda01g02034 286 PANTHER - 14 286 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g02034 Bda-Chr1:56631957 Bda07g00455 Bda-Chr7:5872294 2.28E-99 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g02034 - - mnt:21390393 436.032