Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g02038 ATGTTTAACTTCAGGACTGCAAGTGGCACCTTTCACGATGGAGATCTATTATTAAACCAGAAAGGCCTGCGGCTTATTTCTGAAGAAAAGGAATCTCGTATTTTTTTTTCTATGTTTCAACAGCATTCGGACAGCAAGGAGCTTGATTGTGATTTCTCACTAGAAGACCTCGAGACTATGAATGTCATCGGAAAAGGAAGTGGTGGTGTTGTACAACTTGTTCGTCATAAATGGCTAGGAAAACTATTTGCTTTAAAGGTTGTCATCCAGATGAACATACAAGAAAATATACGAAAACAGATAGTCCAGGAGTTGAAAATAAATCAAACAGCCCAGTGTCCACAGGTGGTGGTATGCTACCACTCATTCTACCACAATGGGGCTATTTCTCTTGTCCTAGAATACATGGATCGCGGATCTTTGGCGGATGTGATTCGACAAGTGAAAACAATTCTTGAACCATATCTGGCTGTTGTATGTAAACAGGTAGTGTTATTGGGTCTTGTGTACTTGCATCATGAACGACATGTCATACATAGGGACATAAAGCCATCCAATCTGCTAGTGAACCACAAAGGGGAGGTGAAAATTACTGATTTTGGTGTTAGTGCTGTGCTAGCTAGCTCTATGGGCCAGCGAGATACTTTTGTAGGAACTTACAACTACATGGCGCCAGAGAGAATTAGTGGGAGTACCTATGACTGCAGTAGCGATATTTGGAGCTTAGGCATGGTGGTACTTGAGTGTGCTATAGGACGGTTTCCCTACACGCAATCTGAAGATCAGAAGAGTTGGCCAAGCTTTTATGAGCTTTTAACAGCAATTGTGTCAAGCCCACCTCCCTCTGCTCCACCAGATCAGTTCTCTCCAGAATTTTGTTCATTTATATCTGCTTGCATTCAAAAGGAACCGCATAGGAGATCATCATCTTTGGACCTCTTGGGTCATCCTTTCATCAAAAAGTTTGAAAACAAAGACATTGATCTGGGAATACTTGTTGGCAGCTTGGAACCACCTTTAAATTTCTCCAGGTAG 1035 41.84 MFNFRTASGTFHDGDLLLNQKGLRLISEEKESRIFFSMFQQHSDSKELDCDFSLEDLETMNVIGKGSGGVVQLVRHKWLGKLFALKVVIQMNIQENIRKQIVQELKINQTAQCPQVVVCYHSFYHNGAISLVLEYMDRGSLADVIRQVKTILEPYLAVVCKQVVLLGLVYLHHERHVIHRDIKPSNLLVNHKGEVKITDFGVSAVLASSMGQRDTFVGTYNYMAPERISGSTYDCSSDIWSLGMVVLECAIGRFPYTQSEDQKSWPSFYELLTAIVSSPPPSAPPDQFSPEFCSFISACIQKEPHRRSSSLDLLGHPFIKKFENKDIDLGILVGSLEPPLNFSR 344
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 56647120 56656777 + Bda004360.1 Bda01g02038 2038
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g02038 344 CDD PKc_MAPKK_plant_like 55 324 - -
Bda01g02038 344 ProSiteProfiles Protein kinase domain profile. 57 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g02038 344 SMART serkin_6 57 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g02038 344 ProSitePatterns Protein kinases ATP-binding region signature. 63 86 IPR017441 GO:0005524
Bda01g02038 344 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE 6 3 343 - -
Bda01g02038 344 Pfam Protein kinase domain 58 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g02038 344 Gene3D Transferase(Phosphotransferase) domain 1 139 334 - -
Bda01g02038 344 ProSitePatterns Serine/Threonine protein kinases active-site signature. 177 189 IPR008271 GO:0004672|GO:0006468
Bda01g02038 344 Gene3D Phosphorylase Kinase; domain 1 24 137 - -
Bda01g02038 344 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 3 343 - -
Bda01g02038 344 SUPERFAMILY Protein kinase-like (PK-like) 55 327 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g02038 Bda-Chr1:56647120 Bda11g01036 Bda-Chr11:10100335 1.86E-142 dispersed
Bda07g01729 Bda-Chr7:32401743 Bda01g02038 Bda-Chr1:56647120 1.06E-70 transposed
Bda01g02038 Bda-Chr1:56647120 Bda02g00383 Bda-Chr2:44203814 3.46E-138 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69468 PF00069 Pkinase 6.10E-64 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g02038 K04368 - zju:107432800 582.022