Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g02040 ATGGCTTATAATAGGCTGTTTGTGCCTATGAAACTGCCTTCGAATTTTACGCAGTTAAGAAAATTGACGTATTTGTTTATGCGTCAATCAAATTTGATCGGTGAACTCCCCGAATCAATTGGAGACATGGCTGCTTTGGAGTTCTTGGATTTTTCCGGCAATAGCTTAACCGGAAAGTTACCAAGTGGTTTGTTCACATTGAAGAATCTCAGTGAATTGTATTTGTACAACAACCATCTGTCCGGCGAAATCCCCTCAGTAATTGAAACTACAAAGATAACGCAGCTCGATCTTTCCGAGAACAATTTGACAGGGACATTACCGGATGATTTTGGAAAGCTTCAGCTACTGACGAAGCTATCTTTGTTCATAAATCAATTTTCTGGTGAGATCCCACCTAGAATCGGCCGTCTTCCTGCGCTGGTAGAACTAAAATTGTTCGACAACAATTTCTCCGGCGCATTGCCTGCTGATTTGGGGAGGTATTCAGCGCTCAAAGTCCTCGACGTCGCAATAAACAGACTAGCAGGAAGCATACCGGAGCACTTGTGCAGCGGCGGTGAGTTCGTCGGGTTGGCAGCTTACGACAATAATCTTAGTGGAGAACTACCAAAATCCTTCGGAAACTGCAGTAGTTTGTATATCGTCAATGTATATAATAATAACTTGTCCGGCATACCTCCCAGCGGTTTTTGGACGGCGTTAAATCTCACTACAGTCCTTCTATACAACAATTCTCTCACTGGCGAGCTTCCGGCGCGAGTATCAGCGAATCTTTCTCGATTGGAGATCAGCAACAACAAGTTTTCCGGTATCATTCCGCCACAGATATCATCTTGGAGAAACTTGCAGGTGTTCTACGCGAGTAACAACCAACTTACAGGCTCAATTCCTCAAGAACTGACTTCTCTTCCAGCTCTGAACGCCCTTGCGCTTGATCAGAACCAGTTATCCGGCAACCTTCCGGTGGATAAAAATTCGTTTAAGTCATTAACTTTTCTTAACCTCAACCATAATCAGCTCTCCGGAGAAATCCCTGAAGAAATTGGTCTTCTCCCAGATCTTACACATCTGGACCTATCCGTAAATCAATTTTCTGGGCAGATTCCGGCTCAACTTGGCCGGTTAATGTTCAATTTTCTCAATCTTTCTTCTAATCATCTTACAGGGATGATACCAACCGAGCTAGAAAACTCAGCTTATGATAACAGCTTCTTGAATAATCCTGGTCTGTGCTCAAGCAACTCACTTCTCAACATCAACGTCTGCAATTCCCGACTGGAAAATTCGAGCAAACTATCTTCCCACCATCTAGCTTTGATCATAAGTTCAACAGTTGCAGTTTTTGTGTTATCAGTCATATGCTTACTCTTCCTGATCAGGTTCTACAAAAACAGAAATCTGGGAGTTGATTCGATATGGAAGTTGACGGCTTTCCAGAAGCTGAACTTTACAGAATCAACGATTTCGTCAGGATTGACAGAGAAGAACCTTATCGGAAGTGGAGGATCCGGGAAAGTTTACTGTGTGCCGGTGAGTCCTCAGGACGATGTGGTTGCCGTGAAAAGGATATGGAATAACAGGAAAGTTGATCAGAGATTGGAGAAACAATTCATGGCAGAAGTTGAGATTCTGAGTTCAATACGCCATTGCAACATCGTCAAGCTACTCTGCGTTATTTCAAACGACAAGACAAAGCTTCTGGTCTATGAATACCTGACAAACCAGAGCCTGGACAAATGGCTGCACAGAAAAACCAGACCCTCGGACTTCTCCGTTCTAGATTGGTCGAAGAGAATTCAGATTGCCGTGGGAGCTGCCAGAGGCCTCTGTTACATGCACTTTGACTGCTCTCCTCCTGTAATTCATCGAGACTTGAAATCCAGCAACATTTTATTGGATTCAGAATTCCACGCAAAAATTGCAGATTTCGGTCTTGCCCAGATCTTAATCAAGCAAGGTGAAGCCGTAACAATGTCCGCCGTAGCTGGCTCTTTCGGCTACATAGCGCCAGAATATGCTCGGACTACAAGGGTAAACGAGAAAATTGACGTCTACAGCTTTGGAGTAATTCTCTTAGAGCTTGTGACCGGAAAAGAAGCCCATGATGGAGACGAAAGCACTAACCTTGCAGATTGGGCGTGGCGCCATATTCAGCGGGGAAAAGCCATAGTAGAAGCTCTGGACGAGGAAATAAAAGAGCCACTTTATGTCGAAGAAATGAGCTGTGTTTTTAAGCTTGGGATATTATGTACAGCTACTCAGCCCTCCTCGAGGCCTTCCATGAAAGATGTTCTGCAAATACTCCAACGCTTGAGCGGTTATATTCGACAGTGGGTGGATGATAACGTCCTCAACCATGTCAGTGAAGAAAAGAATGCTCAAAGCTTGTGGAAAAAGCTTGAGGAATTGTACGCTCGGAAGACCGGCAACAACAAATTATTTTTGATCAAGCAGCTTCTAGGGTTGAAGTATCAAAATGGCAAAGCAATGACCGATCACTTGAACACATTTCAGGGAATTATCAATCAATTGGCTGGAATGAAAATCAATTTTGATGAGGAAGTTGATTCGCAGCTCTATGATCAAGAGCATGATGTCCTCCTAGCGCTTAAGGAATTCTGGAAAGACCCTCCGGCGATTAGGCATTGGAGTTCAACGTCCGGTTCTCACTGTAGCTGGGACGAAATCCGATGCACTAATAACTCCGTCACTGTCCTTTCTCTCGTTAGTAAAAACATCACCGATATAATTCCTTTCTTCATTTCTGATCTTCGAAATCTCACTTTTCTCGATCTGAGTTGGAATTACATACCTGGTGGATTTCCTCGAGTGCTTTACAATTGTTCTAAGCTTCAGTTCTTGGATCTTTCACATAATTATTTCGTTCGTCCCATTCCCGAGGATGTTGATCGATTAAGTCGTCTTCAACATCTGAACCTTTCCGCCAACAACTTCTCCGGCGAACTCCCCGAATCAATTGGAGACATGGCTGCTTTGGAGTTCTTGGACTTATCCGGCAATATCTTAACCGGAAAGTTACCGAGTGGTTTGTTCACATTGAAGAATCTCAGTGAATTGTATTTGTACAACAACCATCTGTCCGGCGAAATCCCCTCAGTAATTGAAACTACAAAGATAACGCAGCTCGATATTTCCGGTAACAATTTGACCGGGATATTACCGGCTGATTTTGGAAAGCTTCAGCTATTGACGAAGCTATCTTTGTTCACGAATCAATTTTTCGGTGAGATTCCACCTAGCATCGGCCGTCTTCCTGCGTTAATATTCCTAAAATTGTTGAACAACAGTTTCTCCGGATCATTGCCTCCTGATTTGGGGAGGGTTGGACGATCTGATTCGATTTTTGAGTCGGACGTTCCCCGTTCTGTCTCGGGTCCCCTTTGGGTCGTGACATATTCAGCGCTCAAAATCCTCGACGTCGCAAAAAACAGACTAACTGGAAGCCTACCGGAGCACTTGTGCAGCGGCGGTGAGTTCAGCGCGTTGGCAGCTTACGACAATAATCTTAGTGGAGAACTACCAAAATCCTTTGGAAACTGCAGTAGTTTGTATATCGTCAATGTATATAATAATAACTTGTCCGGCAAACCTCCCAGTGGTTTTTGGACGGCGTTAAATCTCACTACAGTCCTTCTATACAACAATTTTCTCACTGGCGAGCTTCCGGCGCGAGTATCAGCGAATCTTTCTCGATTGGAGATCAGGAACAACAAATTTTCCGGTATAATTTCGCCACAGATATCATCTTGGAGAAACTTGCAGGTGTTCTTCGCGAGTAACAACCTACTTACAGGCCCAATTCCTCAAGAACTGACTTCTCTTCCAGCTCTGAACGCCCTTGCGCTTGATCAGAACCAGTTATCAGGCAACCTTCCGGTGGATAAAAATTCATTAAAGTCATTAACTTTTCTTAACCTCAGCCATAATCAGCTCTCCGGAGAAATCCCAGAAGAAATTGGTCTTCTCCCAGATCTTACAGATCTGGACCTATCGGTAAATCAATTTTCTGGGCAGATTCCGGCTCAACTTGGCCAGTTGATGTTCAATTTTCTTAATCTTTCTTCTAATCATCTTACAGGGATGATACCAACCGAGCTAGAAAACTCAGCTTATGATAACAGCTTCTTGAATAATCCTGGTCTGTGCTCAAGCAACACACTTCTCAACATCAACGTCTGCAATTCCCGACTAGATAATTCGAGCAAACTATCTTGCCACCATCTAGCTTTGATCATAAGTTCAACAGTTGCAGTTTTTGTGTTATCAGTCATATGTTTACTCTTCCTGATCAGGTTCTACAAAAACAGAAATCTGGGAGTTGATTCGATATGGAAGTTGACGGCTTTCCAGAAGCTGAACTTTACAGAATCAACGATTTCGTCAGGATTGACAGAGAAGAACCTTATCGGAAGTGGAGGATCCGGGGAAGTTTACTGTGTTCCGGTGAGTCCTCGGGACGATGTGGTTGCCGTGAAAAGGATATGGAATAACAGGAAAGTTGAGCAGAGACTGGAGAAACAATTCATGGCGGAAGTTGAGATTCTGAGTTCAATCCGCCATTGCAACATCGTCAAGCTCCTCTGCGTTATTTCAAACAACAATACAAAGCTTCTGGTCTATGAATACCTGACAAACCAGAGCCTGGACAAATGGCTGCACAGAAAAACCAGACCCTCCGACTTTTCCGTTCTAGATTGGTCGAAGAGAATTCAGATAGCCGTGGGAGCTGCCAGAGGCCTCTGTTACATGCACTTTGACTGCTATCCTCCTGTAATTCATCGAGACTTGAAATCCAGCAACATTTTATTGGATTCAGAATTCCACGCAAAAATTGCAGATTTCGGTCTTGCCCAGATCTTAATCAAGCAAGGTGAAGCCGTAACAATGTCCGCCGTAGCTGGTTCTTTCGGCTACATAGCGCCAGAATATGCTCAGACTGCGAGGGTAAACGAGAAAATTGACGTCTACAGCTTTGGAGTAATTCTCTTAGAGCTTGTGACCGGAAAAGAAGCCCATGATGGAGACGAAAGCACTAACCTTGCAGATTGGGCGTGGCGCCATATTCAGGGGGGAAAAGCCATAGTAGAAGCTCTGGACGAGGAAATAAAAGAGCCACTTTATGTCGAAGAAATGAGCTGTGTTTTTAAGCTTGGGATATTATGTACAGCTACTCAGCCCTCCTCGAGGCCTTCCATGAAAGATGTTCTGCAAATACTCCAACGCTGCAACACCCATCAAAGCTCCGGCAGAGAAGAAGATCAAGGCTGA 5292 44.01 MAYNRLFVPMKLPSNFTQLRKLTYLFMRQSNLIGELPESIGDMAALEFLDFSGNSLTGKLPSGLFTLKNLSELYLYNNHLSGEIPSVIETTKITQLDLSENNLTGTLPDDFGKLQLLTKLSLFINQFSGEIPPRIGRLPALVELKLFDNNFSGALPADLGRYSALKVLDVAINRLAGSIPEHLCSGGEFVGLAAYDNNLSGELPKSFGNCSSLYIVNVYNNNLSGIPPSGFWTALNLTTVLLYNNSLTGELPARVSANLSRLEISNNKFSGIIPPQISSWRNLQVFYASNNQLTGSIPQELTSLPALNALALDQNQLSGNLPVDKNSFKSLTFLNLNHNQLSGEIPEEIGLLPDLTHLDLSVNQFSGQIPAQLGRLMFNFLNLSSNHLTGMIPTELENSAYDNSFLNNPGLCSSNSLLNINVCNSRLENSSKLSSHHLALIISSTVAVFVLSVICLLFLIRFYKNRNLGVDSIWKLTAFQKLNFTESTISSGLTEKNLIGSGGSGKVYCVPVSPQDDVVAVKRIWNNRKVDQRLEKQFMAEVEILSSIRHCNIVKLLCVISNDKTKLLVYEYLTNQSLDKWLHRKTRPSDFSVLDWSKRIQIAVGAARGLCYMHFDCSPPVIHRDLKSSNILLDSEFHAKIADFGLAQILIKQGEAVTMSAVAGSFGYIAPEYARTTRVNEKIDVYSFGVILLELVTGKEAHDGDESTNLADWAWRHIQRGKAIVEALDEEIKEPLYVEEMSCVFKLGILCTATQPSSRPSMKDVLQILQRLSGYIRQWVDDNVLNHVSEEKNAQSLWKKLEELYARKTGNNKLFLIKQLLGLKYQNGKAMTDHLNTFQGIINQLAGMKINFDEEVDSQLYDQEHDVLLALKEFWKDPPAIRHWSSTSGSHCSWDEIRCTNNSVTVLSLVSKNITDIIPFFISDLRNLTFLDLSWNYIPGGFPRVLYNCSKLQFLDLSHNYFVRPIPEDVDRLSRLQHLNLSANNFSGELPESIGDMAALEFLDLSGNILTGKLPSGLFTLKNLSELYLYNNHLSGEIPSVIETTKITQLDISGNNLTGILPADFGKLQLLTKLSLFTNQFFGEIPPSIGRLPALIFLKLLNNSFSGSLPPDLGRVGRSDSIFESDVPRSVSGPLWVVTYSALKILDVAKNRLTGSLPEHLCSGGEFSALAAYDNNLSGELPKSFGNCSSLYIVNVYNNNLSGKPPSGFWTALNLTTVLLYNNFLTGELPARVSANLSRLEIRNNKFSGIISPQISSWRNLQVFFASNNLLTGPIPQELTSLPALNALALDQNQLSGNLPVDKNSLKSLTFLNLSHNQLSGEIPEEIGLLPDLTDLDLSVNQFSGQIPAQLGQLMFNFLNLSSNHLTGMIPTELENSAYDNSFLNNPGLCSSNTLLNINVCNSRLDNSSKLSCHHLALIISSTVAVFVLSVICLLFLIRFYKNRNLGVDSIWKLTAFQKLNFTESTISSGLTEKNLIGSGGSGEVYCVPVSPRDDVVAVKRIWNNRKVEQRLEKQFMAEVEILSSIRHCNIVKLLCVISNNNTKLLVYEYLTNQSLDKWLHRKTRPSDFSVLDWSKRIQIAVGAARGLCYMHFDCYPPVIHRDLKSSNILLDSEFHAKIADFGLAQILIKQGEAVTMSAVAGSFGYIAPEYAQTARVNEKIDVYSFGVILLELVTGKEAHDGDESTNLADWAWRHIQGGKAIVEALDEEIKEPLYVEEMSCVFKLGILCTATQPSSRPSMKDVLQILQRCNTHQSSGREEDQG 1763
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 56668240 56689664 - Bda004362.3 Bda01g02040 2040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g02040 1763 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 985 1116 - -
Bda01g02040 1763 ProSitePatterns Serine/Threonine protein kinases active-site signature. 621 633 IPR008271 GO:0004672|GO:0006468
Bda01g02040 1763 SUPERFAMILY L domain-like 1045 1390 - -
Bda01g02040 1763 Pfam Leucine rich repeat N-terminal domain 863 899 IPR013210 -
Bda01g02040 1763 ProSiteProfiles Leucine-rich repeat profile. 330 352 IPR001611 GO:0005515
Bda01g02040 1763 PANTHER RECEPTOR-LIKE PROTEIN KINASE HSL1 985 1116 - -
Bda01g02040 1763 Gene3D Ribonuclease Inhibitor 1 89 IPR032675 -
Bda01g02040 1763 Gene3D Ribonuclease Inhibitor 861 1013 IPR032675 -
Bda01g02040 1763 Gene3D Ribonuclease Inhibitor 1123 1399 IPR032675 -
Bda01g02040 1763 ProSitePatterns Protein kinases ATP-binding region signature. 499 522 IPR017441 GO:0005524
Bda01g02040 1763 Gene3D Phosphorylase Kinase; domain 1 470 572 - -
Bda01g02040 1763 SUPERFAMILY L domain-like 12 253 - -
Bda01g02040 1763 ProSiteProfiles Protein kinase domain profile. 493 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g02040 1763 Gene3D Transferase(Phosphotransferase) domain 1 573 789 - -
Bda01g02040 1763 Gene3D Transferase(Phosphotransferase) domain 1 1551 1762 - -
Bda01g02040 1763 SUPERFAMILY L domain-like 193 398 - -
Bda01g02040 1763 ProSiteProfiles Leucine-rich repeat profile. 1308 1330 IPR001611 GO:0005515
Bda01g02040 1763 Pfam Leucine Rich repeat 1307 1322 IPR001611 GO:0005515
Bda01g02040 1763 Gene3D Ribonuclease Inhibitor 190 430 IPR032675 -
Bda01g02040 1763 SUPERFAMILY Protein kinase-like (PK-like) 1461 1749 IPR011009 -
Bda01g02040 1763 SMART serkin_6 1471 1746 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g02040 1763 SMART serkin_6 493 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g02040 1763 Gene3D Phosphorylase Kinase; domain 1 1454 1550 - -
Bda01g02040 1763 Pfam Leucine rich repeat 903 961 IPR001611 GO:0005515
Bda01g02040 1763 Pfam Leucine rich repeat 258 317 IPR001611 GO:0005515
Bda01g02040 1763 SMART LRR_typ_2 1330 1354 IPR003591 -
Bda01g02040 1763 SMART LRR_typ_2 925 949 IPR003591 -
Bda01g02040 1763 SMART LRR_typ_2 1068 1092 IPR003591 -
Bda01g02040 1763 SMART LRR_typ_2 1306 1329 IPR003591 -
Bda01g02040 1763 SMART LRR_typ_2 973 997 IPR003591 -
Bda01g02040 1763 SMART LRR_typ_2 210 233 IPR003591 -
Bda01g02040 1763 SMART LRR_typ_2 352 376 IPR003591 -
Bda01g02040 1763 SMART LRR_typ_2 328 351 IPR003591 -
Bda01g02040 1763 SMART LRR_typ_2 43 67 IPR003591 -
Bda01g02040 1763 SMART LRR_typ_2 1021 1045 IPR003591 -
Bda01g02040 1763 SMART LRR_typ_2 138 162 IPR003591 -
Bda01g02040 1763 Gene3D Ribonuclease Inhibitor 1014 1122 IPR032675 -
Bda01g02040 1763 Gene3D Ribonuclease Inhibitor 90 187 IPR032675 -
Bda01g02040 1763 ProSiteProfiles Protein kinase domain profile. 1471 1756 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g02040 1763 ProSitePatterns Protein kinases ATP-binding region signature. 1477 1500 IPR017441 GO:0005524
Bda01g02040 1763 PANTHER RECEPTOR-LIKE PROTEIN KINASE HSL1 1 778 - -
Bda01g02040 1763 PANTHER RECEPTOR-LIKE PROTEIN KINASE HSL1 856 997 - -
Bda01g02040 1763 Pfam gag-polypeptide of LTR copia-type 774 855 - -
Bda01g02040 1763 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 1139 1756 - -
Bda01g02040 1763 SUPERFAMILY Protein kinase-like (PK-like) 483 769 IPR011009 -
Bda01g02040 1763 Pfam Leucine Rich Repeat 1048 1068 IPR001611 GO:0005515
Bda01g02040 1763 Pfam Protein kinase domain 1472 1745 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g02040 1763 Pfam Protein kinase domain 494 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g02040 1763 PANTHER RECEPTOR-LIKE PROTEIN KINASE HSL1 1139 1756 - -
Bda01g02040 1763 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1599 1611 IPR008271 GO:0004672|GO:0006468
Bda01g02040 1763 SUPERFAMILY L domain-like 862 1115 - -
Bda01g02040 1763 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 1 778 - -
Bda01g02040 1763 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 856 997 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g02040 Bda-Chr1:56668240 Bda12g00350 Bda-Chr12:4028559 1.09E-13 dispersed
Bda09g01195 Bda-Chr9:42906226 Bda01g02040 Bda-Chr1:56668240 8.77E-09 dispersed
Bda01g02040 Bda-Chr1:56668240 Bda05g00872 Bda-Chr5:57171543 3.54E-28 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69469 PF00069 Pkinase 3.50E-47 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g02040 - - cam:101515509 1531.92