Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g02051 ATGGCCGACGCGTTCAAGTCAGTTACTGAGTCAAGTACTGCCAACTCGTCTACCTTCCCTAGCTCTTCTTCTTCTTCAGAACCCGACCCGAAGAAGAGTAAACGAACCCGAAATAGTGAAGGTAAACACCCGGTTTACAAAGGGGTCCGAATGCGGGCTTGGGGAAAATGGGTATCCGAAATCCGAGAACCCAGAAAGAAGAGCCGGATTTGGCTCGGAAGTTTCTCGACGCCGGAAATGGCGGCCAGGGCTCACGACGTCGCCGCTTTAACCATCAAAGGCAAAACGGCCAAACTCAACTTTCCGGAGATGGCCGGAATACTTCCTCGGCCGTCTTCGAACTCTCCCCGTGACGTTAAAGCCGCCGCTGCTCTGGCCGCTTCAATGGAGGTTCTTCCGGCGATTCCTCCAGAAGCGTCACATCCTCCGCCGTCCGGCGATTCCTCCTCATTTGACGTTCCGTATCCGAAGGAGCTAAGCGAGATAGTACAACTTCCGAGTTTAGGAACGAGCTGCGAATTGCCAGAGTCGCAATTCGTGCTCCATGACTCAGAAGATCGGTGGCTTTACACCGAGAATTACGAGTACTTCAGCGAATCAGATATCATTGGCGGAGACAGAAAGCTTCGATATTTTCTTGTGGCACCATTAATGGCGTCTCTGATCAATCCCCAGTTCAATTTGCTATAA 690 51.74 MADAFKSVTESSTANSSTFPSSSSSSEPDPKKSKRTRNSEGKHPVYKGVRMRAWGKWVSEIREPRKKSRIWLGSFSTPEMAARAHDVAALTIKGKTAKLNFPEMAGILPRPSSNSPRDVKAAAALAASMEVLPAIPPEASHPPPSGDSSSFDVPYPKELSEIVQLPSLGTSCELPESQFVLHDSEDRWLYTENYEYFSESDIIGGDRKLRYFLVAPLMASLINPQFNLL 229
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 56777298 56777987 - Bda004377.1 Bda01g02051 2051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g02051 229 CDD AP2 46 103 IPR001471 GO:0003700|GO:0006355
Bda01g02051 229 Gene3D AP2/ERF domain 45 104 IPR036955 GO:0003700|GO:0006355
Bda01g02051 229 Pfam AP2 domain 44 94 IPR001471 GO:0003700|GO:0006355
Bda01g02051 229 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 7 194 - -
Bda01g02051 229 MobiDBLite consensus disorder prediction 1 47 - -
Bda01g02051 229 SUPERFAMILY DNA-binding domain 45 102 IPR016177 GO:0003677
Bda01g02051 229 PRINTS Ethylene responsive element binding protein signature 46 57 IPR001471 GO:0003700|GO:0006355
Bda01g02051 229 PRINTS Ethylene responsive element binding protein signature 68 84 IPR001471 GO:0003700|GO:0006355
Bda01g02051 229 MobiDBLite consensus disorder prediction 1 27 - -
Bda01g02051 229 MobiDBLite consensus disorder prediction 28 47 - -
Bda01g02051 229 ProSiteProfiles AP2/ERF domain profile. 45 102 IPR001471 GO:0003700|GO:0006355
Bda01g02051 229 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 3-LIKE 7 194 - -
Bda01g02051 229 SMART rav1_2 45 108 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g02051 Bda-Chr1:56777298 Bda02g00418 Bda-Chr2:44826486 1.40E-58 dispersed
Bda03g01044 Bda-Chr3:10078884 Bda01g02051 Bda-Chr1:56777298 2.23E-11 dispersed
Bda01g02051 Bda-Chr1:56777298 Bda01g02052 Bda-Chr1:56783535 4.58E-98 tandem
Bda13g00507 Bda-Chr13:6045528 Bda01g02051 Bda-Chr1:56777298 4.42E-97 transposed
Bda01g02051 Bda-Chr1:56777298 Bda11g01093 Bda-Chr11:10692654 1.68E-74 wgd
Bda01g02051 Bda-Chr1:56777298 Bda02g00425 Bda-Chr2:44879849 1.06E-30 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
15499 PF00847 AP2 6.30E-13 CL0081 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g02051 K09286 - jre:108993210 206.838