Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g02061 ATGACTTCAACGCCACCAGCGTTATCTCCCTTCTCGTCAGGGATTTCTACAGAAATCGTGGTCGGAATCGCCATAGGAGGGGTAATTGTTATTGTAATGTTAAGTATTTTATGTCTCTGTTTCAGAAAGAAGACTAAGAAGAGGCGTCACGAAGATGATTACTATGCAAGACCTCCGACTGGGCCTAAAGATGAGCCTTATGGTGGTCTTCCCCAACAATGGCGACATAATATTCCACCATCTGACCCTGTAGTTGGTGTGGCATCTAAGCCATCTCCTCCTCCAGCATATGCCTCTCGGCCACCTCTCTCACCTCCGCCACCCCATTTTATGAGCAGCAGTGGAGGTTCTGCCTCCAACTACTCCGGCTCAGAAAATCTCGTTCCTCCACCGCCTCCTCCGCCTAGCTATGCCTTGGGTTTCTCAAGGAGTAGTTTTACCTACGAAGAATTGGCAATGGCGACAGATGGTTTCTCAGAAGCCAATCTCCTCGGACAAGGCGGGTTCGGCTATGTTCACAGAGGAGTCCTTCCAAATGGAAAGGAAGTTGCAGTGAAGCAGCTGAAAGCTGGAAGTGGGCAGGGAGAGCGAGAATTCCGAGCTGAAGTTGAGATTATCAGCAGAGTTCATCATAAACATCTTGTTTCCTTGGTCGGATATTGCATTACTGGGTCCCAGCGATTACTTGTCTATGAATTTGTTCCAAACAATACTTTGGAATTCCATTTACACGGGAGTGGACGGCCTACGATGGAATGGCCTACTAGACTGAAAATCGCGCTAGGATCTGCAAAAGGACTGGCATACCTTCACGAGGATTGTCATCCGAAAATCATTCATCGTGACATCAAAGCGTCCAATATTTTGTTGGATTTCAAGTTCGAGGCCAAGGTCGCCGACTTTGGACTTGCAAAGTTGTCTTCCGATGTCAATACCCATGTATCGACTCGTGTGATGGGAACTTTTGGATATCTGGCTCCGGAATACGCGTCGAGTGGGAAACTTACCGAGAAATCAGATGTTTTCTCCTTCGGTGTTATGCTTTTGGAGCTAATCACCGGGCGAAGACCTGTAGATGCGACGGAGGCATTCATGGAGGATAGTTTAGTAGATTGGGCGAGGCCTTTACTTAATCGAGCATTGGAAGATGGAATCCTCGATACTTTGGTCGATCCAAAGCTGCAAAATAATTACAACCATAATGAAATGTCTCGAATGGTTGCCTGTGCAGCTGCTTCGGTACGTCATTCCGCTAGGCGACGACCTCGGATGAGCCAGGTAGTTCGAGCTCTAGAAGGAGACGCCTCTCTCTCCGATTTAAACGAAAGAATCAGGCATGGACAGAGCTCACTTTTCAGCTCCCATGGAAGCTCAGATTATGACACCAACCGATACAACGAAGACTTAAGAAGGTTCAGGAAAATGGCGTTGGGTAGCCAGGAGTATGGGGCCAGTAGTGAATACAGTGGACAAACCAGTGAGTACGGCTTGAACCCGTCTGGCTCGAGCAGCGGCGAGGGCCAAAACACCCGAGAAATGGAGATGGGGACAGTGAAGAAAGACGGCCAAGGCTCCCATGAAAGCTCTTGA 1590 48.43 MTSTPPALSPFSSGISTEIVVGIAIGGVIVIVMLSILCLCFRKKTKKRRHEDDYYARPPTGPKDEPYGGLPQQWRHNIPPSDPVVGVASKPSPPPAYASRPPLSPPPPHFMSSSGGSASNYSGSENLVPPPPPPPSYALGFSRSSFTYEELAMATDGFSEANLLGQGGFGYVHRGVLPNGKEVAVKQLKAGSGQGEREFRAEVEIISRVHHKHLVSLVGYCITGSQRLLVYEFVPNNTLEFHLHGSGRPTMEWPTRLKIALGSAKGLAYLHEDCHPKIIHRDIKASNILLDFKFEAKVADFGLAKLSSDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDATEAFMEDSLVDWARPLLNRALEDGILDTLVDPKLQNNYNHNEMSRMVACAAASVRHSARRRPRMSQVVRALEGDASLSDLNERIRHGQSSLFSSHGSSDYDTNRYNEDLRRFRKMALGSQEYGASSEYSGQTSEYGLNPSGSSSGEGQNTREMEMGTVKKDGQGSHESS 529
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 56840481 56843128 - Bda004387.1 Bda01g02061 2061
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g02061 529 Pfam Protein tyrosine and serine/threonine kinase 162 377 IPR001245 GO:0004672|GO:0006468
Bda01g02061 529 Gene3D Transferase(Phosphotransferase) domain 1 234 449 - -
Bda01g02061 529 MobiDBLite consensus disorder prediction 513 529 - -
Bda01g02061 529 Gene3D Phosphorylase Kinase; domain 1 137 233 - -
Bda01g02061 529 SUPERFAMILY Protein kinase-like (PK-like) 132 431 IPR011009 -
Bda01g02061 529 ProSitePatterns Serine/Threonine protein kinases active-site signature. 278 290 IPR008271 GO:0004672|GO:0006468
Bda01g02061 529 ProSitePatterns Protein kinases ATP-binding region signature. 164 186 IPR017441 GO:0005524
Bda01g02061 529 MobiDBLite consensus disorder prediction 49 136 - -
Bda01g02061 529 SMART serkin_6 158 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g02061 529 MobiDBLite consensus disorder prediction 86 109 - -
Bda01g02061 529 MobiDBLite consensus disorder prediction 482 511 - -
Bda01g02061 529 PANTHER SERINE-THREONINE/TYROSINE-PROTEIN KINASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 3 511 - -
Bda01g02061 529 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 3 511 - -
Bda01g02061 529 MobiDBLite consensus disorder prediction 480 529 - -
Bda01g02061 529 ProSiteProfiles Protein kinase domain profile. 158 437 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g02061 529 MobiDBLite consensus disorder prediction 110 125 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g02061 Bda-Chr1:56840481 Bda10g00129 Bda-Chr10:3557155 0 dispersed
Bda11g01554 Bda-Chr11:48354708 Bda01g02061 Bda-Chr1:56840481 5.16E-82 dispersed
Bda13g01904 Bda-Chr13:43385738 Bda01g02061 Bda-Chr1:56840481 2.48E-59 dispersed
Bda14g01440 Bda-Chr14:18817693 Bda01g02061 Bda-Chr1:56840481 3.83E-93 dispersed
Bda04g00578 Bda-Chr4:54459367 Bda01g02061 Bda-Chr1:56840481 4.39E-81 transposed
Bda01g02061 Bda-Chr1:56840481 Bda11g01113 Bda-Chr11:11007129 0 wgd
Bda01g02061 Bda-Chr1:56840481 Bda02g00443 Bda-Chr2:45072971 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69471 PF07714 PK_Tyr_Ser-Thr 2.10E-45 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g02061 - - bhj:120079307 765.763