Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g02081 ATGGAGACGTTGGCGCAGGAGGTGGTAACGGCTTCACCGTCGGATAGAACTACGACGATGTTTGGATTCGTTTCCTGGGAGGAGGTGTTTGTGTCGAGCGATAAAGGGAGGAGAGAGGTCCATTATTATCTGAAGCGCGAAGACGGGAGCTCAGATCTGGCGGTGATAGGGAAGGAACGGAGCTTGAGGCACATGTCTTATGCGTATGCGATTCGTAATCGAGCTCTTGTTTCGCCCGGGCCGTTTTCGTCGCTCCCAAAACTTAAGTCCCGGAGAGACGTGATTGATTGGCTTGACTCCATTGTTTCAGGTATATACACCTCTCTTTCTTTTTCTCCTTCTCCTTCTCCTTCTTCTTCTCCTTTCTCCCTTATTTTAATATCTTCTCCGTTAGATATTCAATTACGGAAGTCAGGGCAGCATACTAGAGAATTTTCATGGTTAGGCTCTCCTTGGACATGCAGGAAAAGGCGCAGACATTTTCAGTCATTTTGTAGGAATGACATTGAAATCTCTGTTTACGATTTTGTTTATGTTCTTGCTGAGGAAGACCAACGACTTGTTGCTTACTTGGAAGATATGTATGAGGATTCTAGAGGCAGTAAAATGGTTGTGGTACGATGGTTTCACAAAATTGATGAGGTTGATATTGCTTTGCCTCGCCATTTTAATGACAGGGAGATTTTCTTTTCTCTGTGTCTTCAAGATCTCAGTATTGAGTGCATAGATGGATTGGCTGTGGTCCTCAGTCCCCAGCATTTTGAGAAATTTTTGAGTGAGGCAATAAGCACTAAGTTGGAACCATATCTCTGCAGAAAGCAATTTGACAATGATGATGTCAAGCCTTTTGATATTACCCAAGTTAAAGGCTATTGGAAGCAGGAAATTCTTAGATATATGTATACTCTCCCCTCTCTTAAGGCCGATGGAGCTTCAGAGCAGTCTGATGGTGCTGATGATGAAGAAATGGAAAATACTTTATGCGTCAGAGCTAAAAAGAGGCGGCTTTTAAGTGACGATGATATGAACCATGACAGCAAAAAGTGGAAGGACAGAGCTTCTCATCAACTTCAATATTTGACTAGTAGTGTGACGGATGATAAAGGTAGAACTGGAGCATCTAATCAGAACGGAGGTGTTTCTGCCAGAATTTTGGCTAGGAAAGAGACACAACAAAAGTCTCCTCTTTATTTAGCGGTGGGTTCTCAAGTTGAGGTCCTTTCGCAAGACAGTGGGATTAGAGGGTGTTGGTTTAGAGCGAAAATAATCAAGAAGCACAAGGACAAAATAAAGATTCAATATCAAGATCTTCAGGATGCAGATGATGAATCTAATAAACTCGTGGAATGGATTTCTGCAACCAGAGTTGCTACCCCGGATCACTTAGGTCTACGGATTAGTCGGAGGCCTACTATTCGCCCACCTCTTCAGTCTAACAAAGGCATTGTAGCCTTAAAGCTTGGTATTGGGTCAGTAGTTGATGTGTGGTGGCACGATGGATGGTGGGAAGGCATTGTGGTCCTGAGAGAATCCGAAGACAAGCTTCAAGTGCATTTCCCAGGAGAAAAGAAAGAGTCAACTTTTGGGCGAAGTGATTTGAGGCTTTCTCGAGAATGGCTGGGAAGTGGGTGGATGGATATTAAGGAAAGGCCGGATATTGCTGCCACTCTTTCAAGCGTAGAAAAACAAAAAGTTGGAGTCATTTGTGACACAAGCCAATCTAGAAAAGATGAATCTACATATAAAATTTCTTGCCTGGATACTGGATATGACAATAAAAAAGGGTTTTGTATGGTTCCTGATCTGTCAAAGGATAACTCGCTCAGTAAATTGAAGTGGAGTTCATCAAGAAAGCGAAGTCATATTAATGTGATCACTTTCCAGAAGCCACATTTTGACGTCAAGCGCAGTAGAAGCATTTTCCCATCTCGAACGAAGGAAAGCTTTTTTATTTCCACACCCTTGAAAGTTGATCATGAAAATTGCAAGCAAATTGAAGAGTTCCCGTTTTGTTCTTCCGTCGTGGCTCCTCTAACAAGCTTGGTAATGTCCAGGTGA 2058 42.76 METLAQEVVTASPSDRTTTMFGFVSWEEVFVSSDKGRREVHYYLKREDGSSDLAVIGKERSLRHMSYAYAIRNRALVSPGPFSSLPKLKSRRDVIDWLDSIVSGIYTSLSFSPSPSPSSSPFSLILISSPLDIQLRKSGQHTREFSWLGSPWTCRKRRRHFQSFCRNDIEISVYDFVYVLAEEDQRLVAYLEDMYEDSRGSKMVVVRWFHKIDEVDIALPRHFNDREIFFSLCLQDLSIECIDGLAVVLSPQHFEKFLSEAISTKLEPYLCRKQFDNDDVKPFDITQVKGYWKQEILRYMYTLPSLKADGASEQSDGADDEEMENTLCVRAKKRRLLSDDDMNHDSKKWKDRASHQLQYLTSSVTDDKGRTGASNQNGGVSARILARKETQQKSPLYLAVGSQVEVLSQDSGIRGCWFRAKIIKKHKDKIKIQYQDLQDADDESNKLVEWISATRVATPDHLGLRISRRPTIRPPLQSNKGIVALKLGIGSVVDVWWHDGWWEGIVVLRESEDKLQVHFPGEKKESTFGRSDLRLSREWLGSGWMDIKERPDIAATLSSVEKQKVGVICDTSQSRKDESTYKISCLDTGYDNKKGFCMVPDLSKDNSLSKLKWSSSRKRSHINVITFQKPHFDVKRSRSIFPSRTKESFFISTPLKVDHENCKQIEEFPFCSSVVAPLTSLVMSR 685
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 57022383 57025915 + Bda004409.1 Bda01g02081 2081

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g02081 685 Coils Coil 423 443 - -
Bda01g02081 685 ProSiteProfiles BAH domain profile. 169 286 IPR001025 GO:0003682
Bda01g02081 685 Pfam BAH domain 170 278 IPR001025 GO:0003682
Bda01g02081 685 SMART agenet_At_2 485 541 IPR014002 -
Bda01g02081 685 SMART agenet_At_2 396 462 IPR014002 -
Bda01g02081 685 Gene3D - 140 285 IPR043151 -
Bda01g02081 685 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 15 684 - -
Bda01g02081 685 SMART BAH_4 169 286 IPR001025 GO:0003682
Bda01g02081 685 PANTHER AGENET AND BROMO-ADJACENT HOMOLOGY (BAH) DOMAIN-CONTAINING PROTEIN 15 684 - -
Bda01g02081 685 MobiDBLite consensus disorder prediction 363 382 - -
Bda01g02081 685 MobiDBLite consensus disorder prediction 363 381 - -
Bda01g02081 685 Pfam Agenet domain 401 474 IPR008395 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g02081 - - - qsu:112026445 709.909
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g02081 Bda-Chr1:57022383 Bda07g00399 Bda-Chr7:4963223 4.09E-110 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g294 Blo01g00495 Blo16g01057 Bda01g02081 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Bpe02g02274 . . . . . . . . Car15g00849 . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004134 1 5 2 1 1 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 4 1 2 44