Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bda01g02102 | ATGGCTTCTGCCTTGCTTTCACAAATTCCACTTCTCTTCTTTGCCAGAGTTTCAGGTTTTTTGGTTGCTGTACTGGTTCTGCTCTGGGCTCTCGGCTTCAAATCTAGCTTTATTCCTCGCTCTTCCTCTCAAGAGGACCTCATTTATGCTGTTCTTCATCCTATATTTATGGTGATTGGTTTCATTCTCATCAGTGGAGAAGCTATTTTGGTTCATAGATGGTTTCCTGGTTCAAGAAATTTGAAGAAATCTGTACATTTATGCCTGCAAGGCGTGGCTTTGACTTCTGGGATTTTTGGAATTTGGACTAAATTTCATGGACAAGATGGGATTGTAGCTAATTTCTTTAGCCTCCATTCTTGGATGGGTCTCATTTGTGTCTCCCTCTTTGGAGCTCAGTGGATTATGGGCTTTCTAAGCTTTTGGCATCGAGGGGAGGGTCGAACTACGAGAATAAGAGTACTTCCCTGGCATATATTCCTGGGTCTATACACGTATGGTTTAGCAGTGGCGACAGCAGAGACTGGGCTGCTTGAGAAGTTGACATTTTTACAGGCAAAGAGGAATGGCCCCAGACACAATCCAGAGGCCATGGTTGTCAACAGTTTAGGATTGGGATTAGCTCTGCTCAGTGGGATTGTAATATTCAGCGCTGTTTCACCCAAACACCATAGCCGTGGAGCTAAACTAATATACTCAGATAACAAATCCCTCTCTTCTGAATAA | 726 | 43.39 | MASALLSQIPLLFFARVSGFLVAVLVLLWALGFKSSFIPRSSSQEDLIYAVLHPIFMVIGFILISGEAILVHRWFPGSRNLKKSVHLCLQGVALTSGIFGIWTKFHGQDGIVANFFSLHSWMGLICVSLFGAQWIMGFLSFWHRGEGRTTRIRVLPWHIFLGLYTYGLAVATAETGLLEKLTFLQAKRNGPRHNPEAMVVNSLGLGLALLSGIVIFSAVSPKHHSRGAKLIYSDNKSLSSE | 241 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 57119599 | 57121693 | - | Bda004430.1 | Bda01g02102 | 2102 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bda01g02102 | 241 | PANTHER | CYTOCHROME B561-RELATED | 3 | 239 | IPR043205 | GO:0016491 | |
| Bda01g02102 | 241 | SMART | 561_7 | 52 | 177 | IPR006593 | - | |
| Bda01g02102 | 241 | CDD | Cyt_b561_ACYB-1_like | 42 | 185 | - | - | |
| Bda01g02102 | 241 | PANTHER | TRANSMEMBRANE ASCORBATE FERRIREDUCTASE 4-RELATED | 3 | 239 | - | - | |
| Bda01g02102 | 241 | Pfam | Eukaryotic cytochrome b561 | 52 | 183 | IPR006593 | - | |
| Bda01g02102 | 241 | Gene3D | - | 1 | 229 | - | - | |
| Bda01g02102 | 241 | ProSiteProfiles | Cytochrome b561 domain profile. | 14 | 219 | IPR006593 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bda01g02102 | Bda-Chr1:57119599 | Bda07g01072 | Bda-Chr7:12566026 | 1.63E-57 | dispersed | |
| Bda01g02102 | Bda-Chr1:57119599 | Bda13g01762 | Bda-Chr13:40954428 | 2.18E-60 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bda01g02102 | K08360 | - | csin:114257102 | 374.785 |