Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g02112 ATGCACGTCCTTCCCGATTCCTTCAACTGTCTGAGTTCCCCTTGTTTGCCAGAAAATCCATGGAGGAGATTTCCTTTCACTACGTTCGTGGCGATGCTGTCGGCTCTGGTCACTTTGATGGTGGATTCGTTTTCCATGAGCTATTACAGAAAACGATTTCTTCGTCGGGGAAATGGAAATGGCGGCGAAAAGGGAAAGGAGATGAGAAAACTAGAATCGGATCGCGAAAACCACGGACACGGGATTATCACTGAAACTGAAGATGATGACCGCGAAAAGAGCTCGCAGTTGCTCCGGCATCGCGTGGTTGCTCAGGTACTGGAAATGGGGATAGTGGTGCATTCGGTGGTAATAGGGTTGTCGATGGGAGCGTCTGAGAATCCATGCACGATCAGGCCACTCATCGCTGCTCTTTGCTTCCATCAGCTCTTCGAAGGAATGGGCCTCGGAGGCTGCATTTTGCAGGCAGAGTACGGAAAGACGATGAAAGCCGTGATGGTGTTCTTCTTCTCGATCACAACGCCGGTGGGAATAGCGCTGGGAATAGGGCTGACGAAGGTGTACAGCGAGAGCAGCCCCGCGGCGCTCATAGTGGTGGGTCTGCTGAACGCATCGTCGGCTGGTTTGCTCAACTACATGGCTTTGGTTGATCTTCTGGCCTCTGATTTCATGGCTCCTAAGCTTCAATCAAGCTTCAAGCTTCAACTGTGGGCCTATTTCGCTGTCTTTTTAGGAGCTGGAGGGATGTCCGTCATGGCCATATGGGCCTAG 771 51.75 MHVLPDSFNCLSSPCLPENPWRRFPFTTFVAMLSALVTLMVDSFSMSYYRKRFLRRGNGNGGEKGKEMRKLESDRENHGHGIITETEDDDREKSSQLLRHRVVAQVLEMGIVVHSVVIGLSMGASENPCTIRPLIAALCFHQLFEGMGLGGCILQAEYGKTMKAVMVFFFSITTPVGIALGIGLTKVYSESSPAALIVVGLLNASSAGLLNYMALVDLLASDFMAPKLQSSFKLQLWAYFAVFLGAGGMSVMAIWA 256
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 57172365 57173322 - Bda004443.2 Bda01g02112 2112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g02112 256 MobiDBLite consensus disorder prediction 59 90 - -
Bda01g02112 256 Pfam ZIP Zinc transporter 1 253 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Bda01g02112 256 PANTHER ZINC TRANSPORTER 7 1 256 - -
Bda01g02112 256 PANTHER ZINC/IRON TRANSPORTER 1 256 - -
Bda01g02112 256 TIGRFAM zip: ZIP zinc/iron transport family 1 256 IPR004698 GO:0005385|GO:0016021|GO:0071577
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g02112 Bda-Chr1:57172365 Bda07g00889 Bda-Chr7:10399557 1.09E-111 dispersed
Bda01g02112 Bda-Chr1:57172365 Bda13g01602 Bda-Chr13:39575469 1.43E-67 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g02112 K14709 - mnt:21409177 366.696