Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda01g02113 | ATGGATTTAGGTGGGAAGGACGATTATGAACTAGAAAACAGAACTGAGAATTCTGTCAACTGTTCTCCAAGTATGTCCTCTGGGTGGCGATTTGGTGGAGCCCAGCTCTTGAAAACGTCAATGGGTTTGGTTAACCCCGCAAATTCCTCTGGGAAAGAGGATCTAATTTTTCCTCCATGTTCATCTGCTTCGATGGTGGATTCTTTTGGTCCAAACTTCAATGGTGGATTTTTTGATCTCTACAGTAACGTTAGTTCTTCAAACCCTGTTGGAATTAGCAGAGACAGTGCAGGTTCAATGAGAAGAACTTCTGATAGAACTCTTGATATGAGTTGGAACCCACCAAATCAAACGAGAGGAAGTAATTTACCCGTTTTCACTCAACCGAGCTTACCTCAATTTCCGGCTGATTCTGCATTCATCGAGCGGGCAGCTAGATTATCCTGCTTCAATGGTGGGAATCTTATGGAAATAGCTAATCCTTTCGGTATTCCTCAATCCATGGCTCTTTATTCTTGGAGTTCGGAGACGAATCGGGGCAATCAAGAAATTAACTCTATTGACGGGATGAGATTAGCTACTGTGGGGCAACCAAAAAAAAAAGGGATTAGTGATATAGGAGAAGCCTCCATGGATGTTTGTTTGGAGCATGGCTCTGAGAATCCTGAGAATGATGGAAAAAATGAGAACCTTCTCAGTCCTCACAATGAAGAAAAACGCACTATCGGCGGGTCAGGCGGTGAATCGGAAGACGAGATGAGTGGTGGTGCTCAAGATGAGCCGTCAACGGCAGAGGGTAGAGAAGAAGAACCTTCCGGCAAGGGAATCGGATCCAAAAAAAGGAAGAGGGTTAGGCAGAACACTGGGCTTGATCAAGCCAAAGATGGCGAATCTGCGAATGATGATAAGGAGATTGAACTGAAGGACGATCCAAACCCATATACAGTTGCCAACAAATCTACTGGAAAACACAGTAAACAAGGATCTCAAGCATCCGATCCGCCAAAGGAAGAATACATTCACGTTAGAGCACGAAGAGGCCAGGCGACAAACAGCCATAGTCTTGCCGAAAGGGTTAGAAGGGAGAAGATCAGTGAAAGGATGAAGTTTCTTCAAGATCTTGTTCCGGGTTGCAGCAAGGTCACCGGCAAGGCGGTGATGTTAGACGAAATAATAAATTACGTGCAGTCGCTCCAACGGCAAGTAGAATTTTTATCGATGAAACTCGCCACTGTCAATCCGAGGATGGATTTCAATATAGATGGGCTTGCCAAAGATATTCTTCAAGCAAGGGCTGGTTCATCATCTGCGTTGGGCTATTCTCCAGACATATCTATGGCTTATCCTCCATTACAACCATCTCAACACGGACTTCTTTCCTCGGGTGTTCACTGCATCGGGAGCTCTTCCCAGATTCTACGGAGAACGCTTTCTTCCCACTTGACGACGCCGATGACCGGTGGATTTAAGGAGCCCTCTCAGCTACCAAATGTGTGGGAGGATGAGCTCCACCACGTTTTCCAAATGAGCTATGCAACTGCTGCTGCTTCGAATAGCCAAAGTGTTGATGGTAAAATGTCTTAG | 1584 | 45.45 | MDLGGKDDYELENRTENSVNCSPSMSSGWRFGGAQLLKTSMGLVNPANSSGKEDLIFPPCSSASMVDSFGPNFNGGFFDLYSNVSSSNPVGISRDSAGSMRRTSDRTLDMSWNPPNQTRGSNLPVFTQPSLPQFPADSAFIERAARLSCFNGGNLMEIANPFGIPQSMALYSWSSETNRGNQEINSIDGMRLATVGQPKKKGISDIGEASMDVCLEHGSENPENDGKNENLLSPHNEEKRTIGGSGGESEDEMSGGAQDEPSTAEGREEEPSGKGIGSKKRKRVRQNTGLDQAKDGESANDDKEIELKDDPNPYTVANKSTGKHSKQGSQASDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMDFNIDGLAKDILQARAGSSSALGYSPDISMAYPPLQPSQHGLLSSGVHCIGSSSQILRRTLSSHLTTPMTGGFKEPSQLPNVWEDELHHVFQMSYATAAASNSQSVDGKMS | 527 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 57180782 | 57182913 | + | Bda004444.1 | Bda01g02113 | 2113 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda01g02113 | 527 | Gene3D | - | 345 | 417 | IPR036638 | GO:0046983 | |
Bda01g02113 | 527 | PANTHER | TRANSCRIPTION FACTOR BHLH49 | 44 | 526 | - | - | |
Bda01g02113 | 527 | Pfam | Helix-loop-helix DNA-binding domain | 351 | 399 | IPR011598 | GO:0046983 | |
Bda01g02113 | 527 | PANTHER | STEROL REGULATORY ELEMENT-BINDING PROTEIN | 44 | 526 | IPR024097 | GO:0006355 | |
Bda01g02113 | 527 | MobiDBLite | consensus disorder prediction | 218 | 246 | - | - | |
Bda01g02113 | 527 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
Bda01g02113 | 527 | MobiDBLite | consensus disorder prediction | 216 | 336 | - | - | |
Bda01g02113 | 527 | SMART | finulus | 354 | 404 | IPR011598 | GO:0046983 | |
Bda01g02113 | 527 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 346 | 417 | IPR036638 | GO:0046983 | |
Bda01g02113 | 527 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 348 | 398 | IPR011598 | GO:0046983 | |
Bda01g02113 | 527 | MobiDBLite | consensus disorder prediction | 262 | 277 | - | - | |
Bda01g02113 | 527 | MobiDBLite | consensus disorder prediction | 314 | 329 | - | - | |
Bda01g02113 | 527 | MobiDBLite | consensus disorder prediction | 284 | 310 | - | - | |
Bda01g02113 | 527 | CDD | bHLH_AtBPE_like | 338 | 423 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda01g02113 | Bda11g01162 | CCT | |
Bda01g02113 | Bda11g01162 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda01g02113 | Bda-Chr1:57180782 | Bda06g00931 | Bda-Chr6:25133007 | 4.67E-52 | dispersed | |
Bda06g00808 | Bda-Chr6:11320119 | Bda01g02113 | Bda-Chr1:57180782 | 1.84E-30 | dispersed | |
Bda01g01585 | Bda-Chr1:51700642 | Bda01g02113 | Bda-Chr1:57180782 | 3.91E-52 | transposed | |
Bda01g02113 | Bda-Chr1:57180782 | Bda11g01162 | Bda-Chr11:11889411 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
15508 | PF00010 | HLH | 6.70E-06 | No_clan | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda01g02113 | - | - | zju:107429134 | 565.074 |