Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g02122 ATGGATCAACGCCGGATCCGCTCGCCCAAATCGGAGCTGTACTCGACCGTTGTTATCCATTCTGATTCCGACTCCGATCACAATCAAAACGACCGGAAATCCGGCAAGACAGCCGGGAAAAAGACAGAGAAACAAGACCTATACGCTACTATGATTTACAAGAATGATGGGGATGAAGACGACGATGATTCTTCGCTCCCTCCCCTCCTCAAACGTCTTCCCAAGGACTTTGGTGGTGGATCTTCAATTGACTATGAAGAAGGTGGCGGTTACGAGTCTGATAGTTACGCGGGTGATTTCGGGACTATGATTGTGAAGACAGAACGGAATCGACCACAGAGAGGCGGTGTTGCTGATGGAGGCAGGAGCGGTAGCGATGACGAGGACGGCGACGACGGTGATAAGTTTTCGACCTTTGTGGTAAGGTCTACAATGAGGTCGAGCGCGAGAGAATCTGTGAGCGGTACTGTTTTGAGGACAGGTGATTCTGCAAGAGGAGAACTTGAAGGGTCAAATATGGGGATCGCTGTGGCGAGCATGCAGGAGCTCGGAGATGTGGGCATTGGTAAGCAGAGGAAAAGGAGCGGCTCCTACTCCTCGCTGGGTGAAGAGGGCGGTCGCCAACACTCGAAAGTATCTTCAAGTTCGATTCCTGACAGCGTTACCAGGGAAGATCCTTCAACTAAGTATGAATTACTCAATGAGCTCGGAAAAGGATCTTATGGGGCTGTTTACAAGGCCAGAGATGTTAAAACTTCTGAACTTGTTGCTATCAAAGTCATATCGTTATGTGAAGGAGAGGAAGGATATGAGGAAATTCGTGGTGAGATTGAGATGTTGCAGCAATGTAGTCATCCAAATGTTGTCCGTTACCTTGGAAGTTACCAAGGAGAAGAATACCTTTGGATAGTGATGGAGTATTGTGGTGGAGGAAGTGTTGCTGATTTGATGAATGCTACCGAGGAACCTTTAGAGGAGTACCAAATAGCATATATTTGCCGGGAAGCATTGAAGGGTCTTGCTTATCTGCACTCCATATTCAAGGTTCATAGAGATATTAAAGGTGGTAATATATTGCTAACGGAACAAGGAGATGTCAAATTAGGCGATTTTGGAGTTGCGGCACAACTAACTCGGACCATGTCAAAGCGTAACACATTCATTGGCACTCCTCATTGGATGGCTCCAGAAGTTATTCAGGAGAGCCGTTATGATGGGAAGGTGGATGTATGGGCTCTTGGTGTTTCAGCCATCGAAATGGCTGAGGGACTTCCTCCAAGATCTGCAGTGCATCCAATGAGGGTTCTGTTCATGATATCAATTGAGCCAGCTCCAATGCTCGAGGACAAAGAAAAATGGTCTCTGGTGTTCCATGACTTTATTGCAAAAAGCCTAACAAAGGAACCACGTTTACGTCCCACTGCAAGTGAGATGTTGAAGCACAAATTTATTGAGAAATGCAAAAGTGGGGCGTTGGCAATGCTGACTAAGATTGAAAAGGCTAGGGAAATTAGAGCTGCAATGGCACTGCAAGTGCAGAATTTTGTTCCAGCCGCTCCTGGAGATAGTACATTATTGCCTTCAAAAGTGAATGAGGATTATGGCGATACTGTTCCTTCCAGACCTCAGAATATTGGTATTCAAGGGGAAAATAAAGTACCTACAGTTAGTTCTTTGTCAAAGCAGCAGTTATCAGAAGGCACGGACCAATCCTCTGAAGGTAACTTTGCAACTATTATAATTCATGGTGGAGATGACTTAGATAACGCACCTTTTGAGACAATGGTTAACAATGCTGAAACTTCAACTGCTTGTGCAAATGATGAAAGCTCTTCTATCAGTGGCAATGGAGGCTTGATTAACTACAGTATTAACCAATTGTTTGGTATGCATTTCAGGCAGGATTTCACAAGTGCCAAGGCAAATATTGTCTCAAATGTAGAGTCTGATCCCCTTATGGCTGGCACACTGAACCAAAGTAATAGCACAAAAGATCATTCTCAAGCACAGATCGGCAGTCATGTTGGTCTCAACAGTAACACACTGAAGAATGAAACTGCAAGCCGAAAGGCCTTTGCATTGCAAGATAAACTCTGGTCTATATATGCAGCTGGTAATACTGTACCTATTCCATTCTTGCGGGCAACTGATATATCTCCTATAGCTCTCTTATCTGACAATGTTCTCGGAAACACGGATCGGGATGGTGCAGGAGCTTCAGCCATGGAAGCAATACATGAGCTTTTTACTGGAGATGGACAGTCCAAAAAGGGTCGTAGGGGACAAAACGAGATGCCCCTTCCTCCTAGTGTCTACCAAAGATTAACTTCAAGTTCAACCTTGTTAAATCTCGCACAGGCCTTAGCTTATCACAAAACGTGTTACGAAGATATGCCACTGCAGGATTTGCAAGCAACGCAGGAGCAACAAACGATTCAGAACCTTTGCGACACCCTTCGGACAATTCTTCGACTTATTGGGGACGGAGGCGACGGTGGCGGAGTTGTGTTGCAAGGTGTTCCATGGGGGGAGCAGGCTCTTTCTCTAGCCCATGATGTCCTGCTGCGATTTGCTGATGACATAAAACTATTCTCTTTTAAGACTACTCCTCGCGGATACATCTACGCGAGGCTTGATAAATTATACGGGTGTCCTACAATCGAAGAGCTCGAAAGCTTCAACAGAGAATTCAATAAAAGATTAGACGAAGCTGGCGAACGAGGAGAAATTCCAGATGATCTGGCTCTCGAGGTGTCGACCCCTGGTGCTGAGAGGCTCCTTAAGATACCAGACGAACTGGATCGATTTAAAGACATGCCAATGTGTGTACGATACAACGAAGGTGAGCTGTCGAAATTGGCAGAAAAAGATGGAATCTTCATGCTGGAATCTGTGGAAACAAGTTCAGAAATATGTGTGTGGAAGTTGGCAAACATAAAGGAAAATAGAGATCCTTTAAGTAAGGGTAGGCCGTTGAGCAGAAAACAGAGAGATTGGAGATTGAATCTTCCATTTGATATGCATAGAAAGGTGACTTTGTACCTTGAATGTTGA 3054 45.06 MDQRRIRSPKSELYSTVVIHSDSDSDHNQNDRKSGKTAGKKTEKQDLYATMIYKNDGDEDDDDSSLPPLLKRLPKDFGGGSSIDYEEGGGYESDSYAGDFGTMIVKTERNRPQRGGVADGGRSGSDDEDGDDGDKFSTFVVRSTMRSSARESVSGTVLRTGDSARGELEGSNMGIAVASMQELGDVGIGKQRKRSGSYSSLGEEGGRQHSKVSSSSIPDSVTREDPSTKYELLNELGKGSYGAVYKARDVKTSELVAIKVISLCEGEEGYEEIRGEIEMLQQCSHPNVVRYLGSYQGEEYLWIVMEYCGGGSVADLMNATEEPLEEYQIAYICREALKGLAYLHSIFKVHRDIKGGNILLTEQGDVKLGDFGVAAQLTRTMSKRNTFIGTPHWMAPEVIQESRYDGKVDVWALGVSAIEMAEGLPPRSAVHPMRVLFMISIEPAPMLEDKEKWSLVFHDFIAKSLTKEPRLRPTASEMLKHKFIEKCKSGALAMLTKIEKAREIRAAMALQVQNFVPAAPGDSTLLPSKVNEDYGDTVPSRPQNIGIQGENKVPTVSSLSKQQLSEGTDQSSEGNFATIIIHGGDDLDNAPFETMVNNAETSTACANDESSSISGNGGLINYSINQLFGMHFRQDFTSAKANIVSNVESDPLMAGTLNQSNSTKDHSQAQIGSHVGLNSNTLKNETASRKAFALQDKLWSIYAAGNTVPIPFLRATDISPIALLSDNVLGNTDRDGAGASAMEAIHELFTGDGQSKKGRRGQNEMPLPPSVYQRLTSSSTLLNLAQALAYHKTCYEDMPLQDLQATQEQQTIQNLCDTLRTILRLIGDGGDGGGVVLQGVPWGEQALSLAHDVLLRFADDIKLFSFKTTPRGYIYARLDKLYGCPTIEELESFNREFNKRLDEAGERGEIPDDLALEVSTPGAERLLKIPDELDRFKDMPMCVRYNEGELSKLAEKDGIFMLESVETSSEICVWKLANIKENRDPLSKGRPLSRKQRDWRLNLPFDMHRKVTLYLEC 1017
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 57248819 57260175 - Bda004453.1 Bda01g02122 2122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g02122 1017 Hamap Ribosome maturation factor RimP [rimP]. 779 1017 IPR003728 GO:0042274
Bda01g02122 1017 Pfam Protein kinase domain 230 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g02122 1017 SMART serkin_6 230 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g02122 1017 PANTHER SERINE/THREONINE-PROTEIN KINASE TAO 171 815 - -
Bda01g02122 1017 MobiDBLite consensus disorder prediction 106 168 - -
Bda01g02122 1017 MobiDBLite consensus disorder prediction 186 228 - -
Bda01g02122 1017 ProSiteProfiles Protein kinase domain profile. 230 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g02122 1017 PANTHER SERINE/THREONINE-PROTEIN KINASE TAO 171 815 - -
Bda01g02122 1017 MobiDBLite consensus disorder prediction 193 223 - -
Bda01g02122 1017 MobiDBLite consensus disorder prediction 24 43 - -
Bda01g02122 1017 Gene3D Transferase(Phosphotransferase) domain 1 226 514 - -
Bda01g02122 1017 CDD STKc_MAP4K3_like 229 484 - -
Bda01g02122 1017 ProSitePatterns Protein kinases ATP-binding region signature. 236 259 IPR017441 GO:0005524
Bda01g02122 1017 MobiDBLite consensus disorder prediction 1 94 - -
Bda01g02122 1017 MobiDBLite consensus disorder prediction 540 572 - -
Bda01g02122 1017 MobiDBLite consensus disorder prediction 140 159 - -
Bda01g02122 1017 Coils Coil 887 907 - -
Bda01g02122 1017 SUPERFAMILY Protein kinase-like (PK-like) 229 485 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g02122 Bda-Chr1:57248819 Bda07g00318 Bda-Chr7:4226532 3.58E-77 dispersed
Bda01g02122 Bda-Chr1:57248819 Bda01g01279 Bda-Chr1:48193562 1.42E-58 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69474 PF00069 Pkinase 1.70E-66 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g02122 - - mnt:21409099 1046.57