Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g02125 ATGGGAAACGGATTGACATGTTTCGCAGCTGGACGGACAATTCCGACGAAGAAATCCTCCAAGCGACCAACCTCGCGTTTCGACTTCTCCTCGGCTTTGTCGGACTTCTCCACTGGGGAAACTGTTTCAGCCTCTTCCTCCGCCATGAAAACAAATAATAACGGCGATGATTCTTTGAAAATAAACGAGGAGGCTCTCGTTGCAGCTATACTTCTGGCGGAGCAGCACCGGCGAAGTTCTCTCCAATTCAATCGCTCTGCCTCCGTCGCTCATCCACCGCAAACGGCGAAGAAGCAGAGGTTTCCGAGGAGTTCGAGTGCAAGGCAACAACCAAGCTCCGACCCTGTAATTCCCACTCATCGCTTTCCTCATCAGGATAGGAAGATGGATGGTTTAGAAACAAGACATTTTGTTCTCGTCCATGGCGGAGGTTATGGGGCTTGGTGTTGGTATAAAACGGTGACGCTTTTGGAAGAAAGTGGATATAAAGTTGATGCAATTGACCTAGCAGGCTCTGGAGTTCATCCTTCTAACTCCAGTTCCATCACTTCTCTTGCACACTATGCAGACCCTCTCACTCGTCTTCTCCGGCAATTAAACGAAGAAGATAAGGTGATTTTGGTTGGTCATGATGTTGGGGGAGCTTGTATTTCATATGCAATGGAGATGTTTCCAAGTAAAATCTCAAAAGCCATATTCATTGCAGCTACAATGTTGACAAATGGGCAGTCTGCTCTCCACTTATTATCCAAACAGGCAGAAATGAATGATCTGATGCAAAATGCTCAAGTATTTGAGTATGCAAATGGGCATGATCAACCTCCGACGGCCATAAACGTCGACAAAGCACTCCGGCAAGACTTGCTATTCGGTCGAAGTCCGGTGAAGGACGTTGCTTTAGCAACATTATCGATGAGGCCAATCCCTTTTCCGCCATTGATGGAGAAGCTGAGAGTTTCAGAAGAAAGGTATGGGAGTGTGAAGAGATTCTACGTGGGAACTGAAGACGACTGTGCAATTTCTGCTTCCACGCAAGAAGCCATGATCAACTCAAACCCTCCCCACAAGGTCTTCTGGCTCAAAAACTCTGACCACTCTCCCTTCTTCTCTAGGCCTCAAGCCCTCCATAAAATATTACTTGAAATTTCACTTGTTTAA 1158 46.63 MGNGLTCFAAGRTIPTKKSSKRPTSRFDFSSALSDFSTGETVSASSSAMKTNNNGDDSLKINEEALVAAILLAEQHRRSSLQFNRSASVAHPPQTAKKQRFPRSSSARQQPSSDPVIPTHRFPHQDRKMDGLETRHFVLVHGGGYGAWCWYKTVTLLEESGYKVDAIDLAGSGVHPSNSSSITSLAHYADPLTRLLRQLNEEDKVILVGHDVGGACISYAMEMFPSKISKAIFIAATMLTNGQSALHLLSKQAEMNDLMQNAQVFEYANGHDQPPTAINVDKALRQDLLFGRSPVKDVALATLSMRPIPFPPLMEKLRVSEERYGSVKRFYVGTEDDCAISASTQEAMINSNPPHKVFWLKNSDHSPFFSRPQALHKILLEISLV 385
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 57266698 57268328 - Bda004456.1 Bda01g02125 2125

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g02125 385 MobiDBLite consensus disorder prediction 83 128 - -
Bda01g02125 385 Gene3D alpha/beta hydrolase 130 383 IPR029058 -
Bda01g02125 385 PANTHER METHYLESTERASE FAMILY MEMBER 48 383 IPR045889 -
Bda01g02125 385 MobiDBLite consensus disorder prediction 36 57 - -
Bda01g02125 385 Pfam Alpha/beta hydrolase family 137 375 IPR000073 -
Bda01g02125 385 PANTHER METHYLESTERASE 15, CHLOROPLASTIC-RELATED 48 383 - -
Bda01g02125 385 SUPERFAMILY alpha/beta-Hydrolases 135 381 IPR029058 -
Bda01g02125 385 MobiDBLite consensus disorder prediction 83 116 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g02125 - - - nnu:104597920 420.239
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g02125 Bda-Chr1:57266698 Bda07g01315 Bda-Chr7:15945187 8.93E-137 dispersed
Bda01g02125 Bda-Chr1:57266698 Bda09g01568 Bda-Chr9:47223089 1.77E-59 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g29 . . Bda01g02125 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Bma01g00124 . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002680 1 2 2 2 0 2 3 1 2 1 2 2 2 2 2 2 2 2 2 2 2 2 2 2 1 2 2 2 4 2 57