Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda01g02127 ATGCTCGAAGTTCTAGACGTTTCTCGAAACAGTCTCAGCGGCTTAATCCCGGTGGATCTCAGGCAATGCTTAAAATTATCAGTTCTAGTCATCTCTAATCTTTTTAATCCATACACTTATCATAATTCCGTCGAGCACAATTATTTTGAAGGCTCTATTCCTGAAGCAGTTGCTAGTCTTCCAAAGTTAAGGATAGTTTGGGCTCCGAGGGCGAATCTCGAAGGGGAGCTTCCGAGCAAATGGGGTGATTGTGAGAATATGGAAATGCTTAACTTAGCTCAGAATCGTTTAAGAGGGAAAATATTCGACATATTTCGGCAGTGTAAGAAGTTAGATTATCTTGATTTAAGTTCGAATAAGATTTCTGGCAAGCTGGATGAAGAACTTCATCAGGAAAGGCTCGTAAATGTTAGCTTTGATAAATTCACCAGTCGTATTCCAATGAAGTTGCATACAATTTGCAGATCTCTCCGATTCTTGAATGTCTCTAATAATCAAATTTCCGGGTCCATTCCTCCGAGTCTAGGCAGTTGGAAATCACTTGTTGTTCTTGACTGGAGTCGAAACATGATTGAAGGTCACATTCCTCCCGAGGTTGGTCTTCTGAAGCATCTAAAATATCTCTCCCTAGCAGGAAATAATCTGACGGGTGAGATCCCCTCAAGTTTCACATGGCTGAGCTCCCTCCAAGTGTTAGACCTCTCTTCAAATGAAATTTATGGGGAGATCCCCCAGGGTCTGGTGCACTTGACAAAATTAACGGCTCTATTGCTCAACAACAACAAACTTTCGGGGAAGATTCCTTCGGGTTTGTTTCGGCCGACACTATCTTCGTTTAATGCATCATTCACTAACCTTTCTGGTTCATCTCTGTCGAAAAACGACTCGATTGACCTCACTTGTGTTCTTGGCAAGCATTGCTTCTTTTATCCCCATTTTGTTTCCCTGGCTGCATCATCTGAAGAGGTGCTGAATGTCAGCGGAAACTCAGGAAATAACCAATCAGCTGTGTCGGAGAGTGTCAGTGCCACTCCAAATAATGGTCTGAATTCTATTGAAATTGCAGCTATAGTATCTGCGTCAGTAGTTGTTTCAGTTTTCTTAGCTCTGCTTATCCTCTTCTTTTATACAAGAAAACGGGTCCCACATTCAAGGGTTCGGGTATCTGAATCAAGAGAAATAACAGTTTTTGTCGACATTGGAGCTCCATTGACATTCGAGGCAATCGTCAAAGCAACTGGAAATTTCAGTAATGCCAACTGTATTGGAAATGGAGGATTTGGAGCAACCTATAGAGCTGAAATTCATCCAGGAACCTTGGTTGCGGTCAAAAAACTTTCAGTCGGACGATGCCACGGCATTCAACAATTTGATGCAGAGATTAAGATTCTCGAAAAGTTGCGACATCCTAATCTTGTTACCTTGATAGGCTACCATGCTGGTGATTCTGAGATGTTACTCATCTATAATTACTTGCCGGGTGGTAATCTGGAGAAGTTCATAAAAGATCGATCAGCTAAAGCCGTCGATTGGAAGATTCTTCACAAGATCGCTTTCGACATAGCCAAGGCACTCGCTTATCTACACGACCAGTGCACTCCAAGGGTCCTTCACCGTGATGTCAAACCGAGTAACATATTACTCGATAACGACTTAAATGCGTATTTATCTGATTTCGGTTTATCGAGACTCTTGGGAAGTTCCGAATCGCACGCAACGACTGGTGTGGCAGGAACGTTCGGTTATGTGGCCCCGGAGTATGCTTTGACCTGTCGGCTATCCGAGAAAGCTGATGTTTACAGCTATGGTGTGGTTTTGCTTGAATTAATATCGGATAAAAGAGCATTGGATCCTTCCTTTTCGTCGCATGTAAATGGTTTCAATATCGTTTCGTGGGCCCGCATGCAGTTAGGACTAGGACGGGCAAAAGAAGTGTTCACTGTCGGGCTGTGGGATTCAACTCCGCCCAATGATTTGGTCTTGATGCTTCACTTAGCCATCACGTGTACGGATGAAACACTCTCGACTAGGCCCACGATGAAGCAAGTTCTCCAGAGATTGAAGCAAATTCAACCTCTTGCTCATTAG 2088 43.25 MLEVLDVSRNSLSGLIPVDLRQCLKLSVLVISNLFNPYTYHNSVEHNYFEGSIPEAVASLPKLRIVWAPRANLEGELPSKWGDCENMEMLNLAQNRLRGKIFDIFRQCKKLDYLDLSSNKISGKLDEELHQERLVNVSFDKFTSRIPMKLHTICRSLRFLNVSNNQISGSIPPSLGSWKSLVVLDWSRNMIEGHIPPEVGLLKHLKYLSLAGNNLTGEIPSSFTWLSSLQVLDLSSNEIYGEIPQGLVHLTKLTALLLNNNKLSGKIPSGLFRPTLSSFNASFTNLSGSSLSKNDSIDLTCVLGKHCFFYPHFVSLAASSEEVLNVSGNSGNNQSAVSESVSATPNNGLNSIEIAAIVSASVVVSVFLALLILFFYTRKRVPHSRVRVSESREITVFVDIGAPLTFEAIVKATGNFSNANCIGNGGFGATYRAEIHPGTLVAVKKLSVGRCHGIQQFDAEIKILEKLRHPNLVTLIGYHAGDSEMLLIYNYLPGGNLEKFIKDRSAKAVDWKILHKIAFDIAKALAYLHDQCTPRVLHRDVKPSNILLDNDLNAYLSDFGLSRLLGSSESHATTGVAGTFGYVAPEYALTCRLSEKADVYSYGVVLLELISDKRALDPSFSSHVNGFNIVSWARMQLGLGRAKEVFTVGLWDSTPPNDLVLMLHLAITCTDETLSTRPTMKQVLQRLKQIQPLAH 695
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 57274590 57276677 - Bda004458.1 Bda01g02127 2127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda01g02127 695 ProSitePatterns Protein kinases ATP-binding region signature. 422 445 IPR017441 GO:0005524
Bda01g02127 695 SMART serkin_6 416 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g02127 695 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 2 125 - -
Bda01g02127 695 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 132 692 - -
Bda01g02127 695 Gene3D Phosphorylase Kinase; domain 1 378 491 - -
Bda01g02127 695 Pfam Protein kinase domain 419 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda01g02127 695 PRINTS Leucine-rich repeat signature 226 239 - -
Bda01g02127 695 PRINTS Leucine-rich repeat signature 2 15 - -
Bda01g02127 695 SMART LRR_typ_2 226 249 IPR003591 -
Bda01g02127 695 SMART LRR_typ_2 250 274 IPR003591 -
Bda01g02127 695 SMART LRR_typ_2 154 178 IPR003591 -
Bda01g02127 695 SMART LRR_typ_2 202 225 IPR003591 -
Bda01g02127 695 ProSitePatterns Serine/Threonine protein kinases active-site signature. 536 548 IPR008271 GO:0004672|GO:0006468
Bda01g02127 695 SUPERFAMILY RNI-like 2 269 - -
Bda01g02127 695 Gene3D Transferase(Phosphotransferase) domain 1 492 692 - -
Bda01g02127 695 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RPK2 2 125 - -
Bda01g02127 695 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RPK2 132 692 - -
Bda01g02127 695 Gene3D Ribonuclease Inhibitor 1 300 IPR032675 -
Bda01g02127 695 SUPERFAMILY Protein kinase-like (PK-like) 394 688 IPR011009 -
Bda01g02127 695 Pfam Leucine rich repeat 204 263 IPR001611 GO:0005515
Bda01g02127 695 CDD STKc_IRAK 422 690 - -
Bda01g02127 695 Pfam Leucine Rich Repeat 156 176 IPR001611 GO:0005515
Bda01g02127 695 ProSiteProfiles Protein kinase domain profile. 416 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g02127 Bda-Chr1:57274590 Bda07g01320 Bda-Chr7:16013117 2.86E-09 dispersed
Bda01g02127 Bda-Chr1:57274590 Bda03g01111 Bda-Chr3:11359984 1.10E-21 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69475 PF00069 Pkinase 4.10E-45 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda01g02127 - - pmum:103342054 717.613